RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 MAFBQ9Y5Q3 323 aaPredicted RBP14.59□□□□□ -0.07
USP28-212ENST00000544750 DMXL1Q9Y485 3027 aa14.59□□□□□ -0.07
USP28-212ENST00000544750 DOCK8Q8NF50 2099 aa14.58□□□□□ -0.08
USP28-212ENST00000544750 IGLV3-22A0A075B6J6 115 aa14.58□□□□□ -0.08
USP28-212ENST00000544750 FAM86B1E9PN63 330 aa14.58□□□□□ -0.08
USP28-212ENST00000544750 DDX39AO00148 427 aaKnown RBP14.58□□□□□ -0.08
USP28-212ENST00000544750 FAM86B2P0C5J1 330 aa14.58□□□□□ -0.08
USP28-212ENST00000544750 CLCN5P51795 746 aa14.58□□□□□ -0.08
USP28-212ENST00000544750 CWF19L1Q69YN2 538 aaKnown RBP14.58□□□□□ -0.08
USP28-212ENST00000544750 KIAA1841Q6NSI8 718 aa14.58□□□□□ -0.08
USP28-212ENST00000544750 SWSAP1Q6NVH7 229 aa14.58□□□□□ -0.08
USP28-212ENST00000544750 PPP1R18Q6NYC8 613 aa14.58□□□□□ -0.08
USP28-212ENST00000544750 ERMP1Q7Z2K6 904 aa14.58□□□□□ -0.08
USP28-212ENST00000544750 FEZF2Q8TBJ5 459 aa14.58□□□□□ -0.08
USP28-212ENST00000544750 USTQ9Y2C2 406 aa14.58□□□□□ -0.08
USP28-212ENST00000544750 EP300Q09472 2414 aaPredicted RBP14.57□□□□□ -0.08
USP28-212ENST00000544750 WEE2P0C1S8 567 aa14.57□□□□□ -0.08
USP28-212ENST00000544750 NAPAP54920 295 aa14.57□□□□□ -0.08
USP28-212ENST00000544750 NLRP11P59045 1033 aaKnown RBP14.57□□□□□ -0.08
USP28-212ENST00000544750 AP3B2Q13367 1082 aa14.57□□□□□ -0.08
USP28-212ENST00000544750 FRMD5Q7Z6J6 570 aa14.57□□□□□ -0.08
USP28-212ENST00000544750 C12orf76Q8N812 135 aaPredicted RBP14.57□□□□□ -0.08
USP28-212ENST00000544750 ZBP1Q9H171 429 aa14.57□□□□□ -0.08
USP28-212ENST00000544750 LIMD1Q9UGP4 676 aa14.57□□□□□ -0.08
USP28-212ENST00000544750 IRAK3Q9Y616 596 aa14.57□□□□□ -0.08
USP28-212ENST00000544750 SLC12A7Q9Y666 1083 aa14.57□□□□□ -0.08
USP28-212ENST00000544750 DNAH14Q0VDD8 3507 aa14.56□□□□□ -0.08
USP28-212ENST00000544750 A0A0U1RQF3 1178 aa14.56□□□□□ -0.08
USP28-212ENST00000544750 IPO5O00410 1097 aaKnown RBP14.56□□□□□ -0.08
USP28-212ENST00000544750 CYP3A4P08684 503 aa14.56□□□□□ -0.08
USP28-212ENST00000544750 NPR3P17342 541 aa14.56□□□□□ -0.08
USP28-212ENST00000544750 EIF4BP23588 611 aaKnown RBP14.56□□□□□ -0.08
USP28-212ENST00000544750 CLCN3P51790 818 aa14.56□□□□□ -0.08
USP28-212ENST00000544750 RARS2Q5T160 578 aaKnown RBP14.56□□□□□ -0.08
USP28-212ENST00000544750 MCTP2Q6DN12 878 aa14.56□□□□□ -0.08
USP28-212ENST00000544750 KANK3Q6NY19 840 aa14.56□□□□□ -0.08
USP28-212ENST00000544750 MIS18BP1Q6P0N0 1132 aa14.56□□□□□ -0.08
USP28-212ENST00000544750 MICU3Q86XE3 530 aa14.56□□□□□ -0.08
USP28-212ENST00000544750 PLA2G4DQ86XP0 818 aa14.56□□□□□ -0.08
USP28-212ENST00000544750 PLCD3Q8N3E9 789 aa14.56□□□□□ -0.08
USP28-212ENST00000544750 METTL13Q8N6R0 699 aa14.56□□□□□ -0.08
USP28-212ENST00000544750 TDRD5Q8NAT2 981 aaKnown RBP14.56□□□□□ -0.08
USP28-212ENST00000544750 SLC22A17Q8WUG5 538 aa14.56□□□□□ -0.08
USP28-212ENST00000544750 NKD2Q969F2 451 aaPredicted RBP14.56□□□□□ -0.08
USP28-212ENST00000544750 LRRC2Q9BYS8 371 aa14.56□□□□□ -0.08
USP28-212ENST00000544750 LSG1Q9H089 658 aaKnown RBP14.56□□□□□ -0.08
USP28-212ENST00000544750 MTCL1Q9Y4B5 1905 aaKnown RBP14.56□□□□□ -0.08
USP28-212ENST00000544750 SMCO2A6NFE2 343 aa14.55□□□□□ -0.08
USP28-212ENST00000544750 NT5C1B-RDH14C9J2C7 533 aa14.55□□□□□ -0.08
USP28-212ENST00000544750 hCG_1984214I3L0E3 225 aa14.55□□□□□ -0.08
USP28-212ENST00000544750 SLC27A2O14975 620 aa14.55□□□□□ -0.08
USP28-212ENST00000544750 MAGEB2O15479 319 aa14.55□□□□□ -0.08
USP28-212ENST00000544750 EOMESO95936 686 aa14.55□□□□□ -0.08
USP28-212ENST00000544750 EPCAMP16422 314 aa14.55□□□□□ -0.08
USP28-212ENST00000544750 ZSCAN20P17040 1043 aaPredicted RBP14.55□□□□□ -0.08
USP28-212ENST00000544750 ADCY7P51828 1080 aa14.55□□□□□ -0.08
USP28-212ENST00000544750 BCAR1P56945 870 aa14.55□□□□□ -0.08
USP28-212ENST00000544750 ZNF746Q6NUN9 644 aaPredicted RBP14.55□□□□□ -0.08
USP28-212ENST00000544750 SKAP1Q86WV1 359 aa14.55□□□□□ -0.08
USP28-212ENST00000544750 TMEM173Q86WV6 379 aaPredicted RBP14.55□□□□□ -0.08
USP28-212ENST00000544750 ABI1Q8IZP0 508 aa14.55□□□□□ -0.08
USP28-212ENST00000544750 ZNF713Q8N859 430 aaPredicted RBP14.55□□□□□ -0.08
USP28-212ENST00000544750 HELQQ8TDG4 1101 aa14.55□□□□□ -0.08
USP28-212ENST00000544750 DZANK1Q9NVP4 752 aa14.55□□□□□ -0.08
USP28-212ENST00000544750 PI15O43692 258 aa14.54□□□□□ -0.08
USP28-212ENST00000544750 CXCL14O95715 111 aa14.54□□□□□ -0.08
USP28-212ENST00000544750 DARSP14868 501 aaKnown RBP14.54□□□□□ -0.08
USP28-212ENST00000544750 AOC1P19801 751 aa14.54□□□□□ -0.08
USP28-212ENST00000544750 ZNF76P36508 570 aa14.54□□□□□ -0.08
USP28-212ENST00000544750 ID4P47928 161 aa14.54□□□□□ -0.08
USP28-212ENST00000544750 METAP2P50579 478 aaKnown RBP eCLIP14.54□□□□□ -0.08
USP28-212ENST00000544750 GPC3P51654 580 aa14.54□□□□□ -0.08
USP28-212ENST00000544750 NECTIN1Q15223 517 aa14.54□□□□□ -0.08
USP28-212ENST00000544750 ATAT1Q5SQI0 421 aa14.54□□□□□ -0.08
USP28-212ENST00000544750 EFCAB12Q6NXP0 572 aa14.54□□□□□ -0.08
USP28-212ENST00000544750 APOA5Q6Q788 366 aa14.54□□□□□ -0.08
USP28-212ENST00000544750 CKAP2LQ8IYA6 745 aa14.54□□□□□ -0.08
USP28-212ENST00000544750 SMAP1Q8IYB5 467 aaPredicted RBP14.54□□□□□ -0.08
USP28-212ENST00000544750 ADSSL1Q8N142 457 aa14.54□□□□□ -0.08
USP28-212ENST00000544750 VPS52Q8N1B4 723 aa14.54□□□□□ -0.08
USP28-212ENST00000544750 ZNF710Q8N1W2 664 aa14.54□□□□□ -0.08
USP28-212ENST00000544750 AUTS2Q8WXX7 1259 aa14.54□□□□□ -0.08
USP28-212ENST00000544750 CYP26B1Q9NR63 512 aa14.54□□□□□ -0.08
USP28-212ENST00000544750 TBC1D22BQ9NU19 505 aa14.54□□□□□ -0.08
USP28-212ENST00000544750 BARHL2Q9NY43 387 aa14.54□□□□□ -0.08
USP28-212ENST00000544750 CEP131Q9UPN4 1083 aa14.54□□□□□ -0.08
USP28-212ENST00000544750 AKT3Q9Y243 479 aa14.54□□□□□ -0.08
USP28-212ENST00000544750 PCDHA10Q9Y5I2 948 aa14.54□□□□□ -0.08
USP28-212ENST00000544750 ADAMTS3O15072 1205 aa14.53□□□□□ -0.08
USP28-212ENST00000544750 ZNF862O60290 1169 aa14.53□□□□□ -0.08
USP28-212ENST00000544750 CTSAP10619 480 aa14.53□□□□□ -0.08
USP28-212ENST00000544750 POLGP54098 1239 aaPredicted RBP14.53□□□□□ -0.08
USP28-212ENST00000544750 CENPQQ7L2Z9 268 aaPredicted RBP14.53□□□□□ -0.08
USP28-212ENST00000544750 CCDC105Q8IYK2 499 aa14.53□□□□□ -0.08
USP28-212ENST00000544750 LRRC71Q8N4P6 559 aa14.53□□□□□ -0.08
USP28-212ENST00000544750 TMEM169Q96HH4 297 aa14.53□□□□□ -0.08
USP28-212ENST00000544750 MAP7D2Q96T17 732 aa14.53□□□□□ -0.08
USP28-212ENST00000544750 TRAIPQ9BWF2 469 aa14.53□□□□□ -0.08
USP28-212ENST00000544750 MRPL9Q9BYD2 267 aaKnown RBP14.53□□□□□ -0.08
USP28-212ENST00000544750 GLT8D2Q9H1C3 349 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms