RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 RPGRIP1Q96KN7 1286 aa4.83□□□□□ -1.64
SNHG1-220ENST00000544550 PNMA5Q96PV4 448 aa4.83□□□□□ -1.64
SNHG1-220ENST00000544550 BACH2Q9BYV9 841 aa4.83□□□□□ -1.64
SNHG1-220ENST00000544550 IGFLR1Q9H665 355 aa4.83□□□□□ -1.64
SNHG1-220ENST00000544550 ANTXR1Q9H6X2 564 aa4.83□□□□□ -1.64
SNHG1-220ENST00000544550 MKNK2Q9HBH9 465 aa4.83□□□□□ -1.64
SNHG1-220ENST00000544550 INCENPQ9NQS7 918 aa4.83□□□□□ -1.64
SNHG1-220ENST00000544550 CYP39A1Q9NYL5 469 aa4.83□□□□□ -1.64
SNHG1-220ENST00000544550 CHD7Q9P2D1 2997 aa4.83□□□□□ -1.64
SNHG1-220ENST00000544550 ARPP21Q9UBL0 812 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-220ENST00000544550 CLIP2Q9UDT6 1046 aa4.83□□□□□ -1.64
SNHG1-220ENST00000544550 GTF2IRD1Q9UHL9 959 aa4.83□□□□□ -1.64
SNHG1-220ENST00000544550 DBNLQ9UJU6 430 aaKnown RBP4.83□□□□□ -1.64
SNHG1-220ENST00000544550 PNMA2Q9UL42 364 aa4.83□□□□□ -1.64
SNHG1-220ENST00000544550 NOB1Q9ULX3 412 aaKnown RBP4.83□□□□□ -1.64
SNHG1-220ENST00000544550 NR2E1Q9Y466 385 aa4.83□□□□□ -1.64
SNHG1-220ENST00000544550 AK5Q9Y6K8 562 aa4.83□□□□□ -1.64
SNHG1-220ENST00000544550 TANC1Q9C0D5 1861 aa4.83□□□□□ -1.64
SNHG1-220ENST00000544550 COL11A1P12107 1806 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-220ENST00000544550 USP34Q70CQ2 3546 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 ZNF532Q9HCE3 1301 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 SIP14410 1827 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 PNMA6EA0A0J9YXQ4 647 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 RSPH10B2B2RC85 870 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 TMEM232C9JQI7 657 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 PLA2G6O60733 806 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 CAND2O75155 1236 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 TTLL1O95922 423 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 PROCP04070 461 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 PSAPP07602 524 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 RSPH10BP0C881 870 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 TXNP10599 105 aaKnown RBP4.82□□□□□ -1.64
SNHG1-220ENST00000544550 ALDH5A1P51649 535 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-220ENST00000544550 CLCN5P51795 746 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 GAS6Q14393 721 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 DGKDQ16760 1214 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 PLEKHG4Q58EX7 1191 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 TMEM63BQ5T3F8 832 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 ZNF618Q5T7W0 954 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 KIAA0319Q5VV43 1072 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 SLFN13Q68D06 897 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 ZC3H14Q6PJT7 736 aaKnown RBP4.82□□□□□ -1.64
SNHG1-220ENST00000544550 NSMFQ6X4W1 530 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 DHX32Q7L7V1 743 aaKnown RBP4.82□□□□□ -1.64
SNHG1-220ENST00000544550 RAB44Q7Z6P3 723 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-220ENST00000544550 LCORLQ8N3X6 602 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 GPR161Q8N6U8 529 aaKnown RBP4.82□□□□□ -1.64
SNHG1-220ENST00000544550 TMEM105Q8N8V8 129 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 DBF4BQ8NFT6 615 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 KCNG4Q8TDN1 519 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 STAG1Q8WVM7 1258 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 ARHGAP45Q92619 1136 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 DHX38Q92620 1227 aaKnown RBP4.82□□□□□ -1.64
SNHG1-220ENST00000544550 P2RX5Q93086 422 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 MKL1Q969V6 931 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 CTAGE1Q96RT6 745 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 CDCA3Q99618 268 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-220ENST00000544550 HAUS7Q99871 368 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 IFIH1Q9BYX4 1025 aaKnown RBP4.82□□□□□ -1.64
SNHG1-220ENST00000544550 OSBPL7Q9BZF2 842 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 CCDC8Q9H0W5 538 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-220ENST00000544550 MFSD1Q9H3U5 465 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 MRS2Q9HD23 443 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 NPHS2Q9NP85 383 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 DLL3Q9NYJ7 618 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 KANSL3Q9P2N6 904 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 ISY1Q9ULR0 285 aaKnown RBP4.82□□□□□ -1.64
SNHG1-220ENST00000544550 SORCS3Q9UPU3 1222 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 USP15Q9Y4E8 981 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-220ENST00000544550 SMCHD1A6NHR9 2005 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 MYH1P12882 1939 aa4.82□□□□□ -1.64
SNHG1-220ENST00000544550 ADGRA3Q8IWK6 1321 aa4.81□□□□□ -1.64
SNHG1-220ENST00000544550 A0A1W2PP55 124 aa4.81□□□□□ -1.64
SNHG1-220ENST00000544550 TCRBV5S4A2TA0A5A2 114 aa4.81□□□□□ -1.64
SNHG1-220ENST00000544550 PTPDC1A2A3K4 754 aa4.81□□□□□ -1.64
SNHG1-220ENST00000544550 GRM6O15303 877 aa4.81□□□□□ -1.64
SNHG1-220ENST00000544550 LINC01565O15544 149 aa4.81□□□□□ -1.64
SNHG1-220ENST00000544550 SURF6O75683 361 aaKnown RBP4.81□□□□□ -1.64
SNHG1-220ENST00000544550 MBD4O95243 580 aa4.81□□□□□ -1.64
SNHG1-220ENST00000544550 GH1P01241 217 aa4.81□□□□□ -1.64
SNHG1-220ENST00000544550 ICAM1P05362 532 aa4.81□□□□□ -1.64
SNHG1-220ENST00000544550 MMP3P08254 477 aa4.81□□□□□ -1.64
SNHG1-220ENST00000544550 EDN3P14138 238 aa4.81□□□□□ -1.64
SNHG1-220ENST00000544550 THPOP40225 353 aa4.81□□□□□ -1.64
SNHG1-220ENST00000544550 SLC1A4P43007 532 aa4.81□□□□□ -1.64
SNHG1-220ENST00000544550 NRLP54845 237 aa4.81□□□□□ -1.64
SNHG1-220ENST00000544550 PLAURQ03405 335 aa4.81□□□□□ -1.64
SNHG1-220ENST00000544550 HYAL2Q12891 473 aa4.81□□□□□ -1.64
SNHG1-220ENST00000544550 TCTN1Q2MV58 587 aa4.81□□□□□ -1.64
SNHG1-220ENST00000544550 TSNAXIP1Q2TAA8 658 aa4.81□□□□□ -1.64
SNHG1-220ENST00000544550 ZNF468Q5VIY5 522 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-220ENST00000544550 PEAR1Q5VY43 1037 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-220ENST00000544550 CTR9Q6PD62 1173 aa4.81□□□□□ -1.64
SNHG1-220ENST00000544550 ERC1Q8IUD2 1116 aa4.81□□□□□ -1.64
SNHG1-220ENST00000544550 DHX37Q8IY37 1157 aaKnown RBP4.81□□□□□ -1.64
SNHG1-220ENST00000544550 ZNF444Q8N0Y2 327 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-220ENST00000544550 KREMEN2Q8NCW0 462 aa4.81□□□□□ -1.64
SNHG1-220ENST00000544550 DNERQ8NFT8 737 aa4.81□□□□□ -1.64
SNHG1-220ENST00000544550 SUSD6Q92537 303 aa4.81□□□□□ -1.64
SNHG1-220ENST00000544550 NEK1Q96PY6 1258 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms