RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 ZKSCAN4Q969J2 545 aaPredicted RBP17.21■□□□□ 0.34
SNRNP70-203ENST00000544278 CCDC43Q96MW1 224 aaKnown RBP17.21■□□□□ 0.34
SNRNP70-203ENST00000544278 SSU72P8A0A1W2PR75 194 aa17.2■□□□□ 0.34
SNRNP70-203ENST00000544278 C2CD6Q53TS8 623 aa17.2■□□□□ 0.34
SNRNP70-203ENST00000544278 LMBRD2Q68DH5 695 aaPredicted RBP17.2■□□□□ 0.34
SNRNP70-203ENST00000544278 PADI6Q6TGC4 694 aa17.2■□□□□ 0.34
SNRNP70-203ENST00000544278 GLT8D2Q9H1C3 349 aa17.2■□□□□ 0.34
SNRNP70-203ENST00000544278 TRAF3IP3Q9Y228 551 aa17.2■□□□□ 0.34
SNRNP70-203ENST00000544278 PITPNM2Q9BZ72 1349 aa17.2■□□□□ 0.34
SNRNP70-203ENST00000544278 DNAH12Q6ZR08 3092 aa17.2■□□□□ 0.34
SNRNP70-203ENST00000544278 GOLGA6BA6NDN3 693 aa17.2■□□□□ 0.34
SNRNP70-203ENST00000544278 PDXKO00764 312 aa17.2■□□□□ 0.34
SNRNP70-203ENST00000544278 HDLBPQ00341 1268 aaKnown RBP17.2■□□□□ 0.34
SNRNP70-203ENST00000544278 MTMR2Q13614 643 aa17.2■□□□□ 0.34
SNRNP70-203ENST00000544278 EDRF1Q3B7T1 1238 aa17.2■□□□□ 0.34
SNRNP70-203ENST00000544278 EPC2Q52LR7 807 aa17.2■□□□□ 0.34
SNRNP70-203ENST00000544278 DAAM2Q86T65 1068 aa17.2■□□□□ 0.34
SNRNP70-203ENST00000544278 AGPAT3Q9NRZ7 376 aa17.2■□□□□ 0.34
SNRNP70-203ENST00000544278 RIPK3Q9Y572 518 aa17.2■□□□□ 0.34
SNRNP70-203ENST00000544278 RAD51CO43502 376 aa17.19■□□□□ 0.34
SNRNP70-203ENST00000544278 TCP1P17987 556 aaKnown RBP17.19■□□□□ 0.34
SNRNP70-203ENST00000544278 CIITAP33076 1130 aa17.19■□□□□ 0.34
SNRNP70-203ENST00000544278 FLAD1Q8NFF5 587 aa17.19■□□□□ 0.34
SNRNP70-203ENST00000544278 LNX1Q8TBB1 728 aaPredicted RBP17.19■□□□□ 0.34
SNRNP70-203ENST00000544278 TOPORSQ9NS56 1045 aaPredicted RBP17.19■□□□□ 0.34
SNRNP70-203ENST00000544278 LCA5LO95447 670 aa17.19■□□□□ 0.34
SNRNP70-203ENST00000544278 GNA14O95837 355 aa17.19■□□□□ 0.34
SNRNP70-203ENST00000544278 PEX3P56589 373 aa17.19■□□□□ 0.34
SNRNP70-203ENST00000544278 CHURC1Q8WUH1 139 aa17.19■□□□□ 0.34
SNRNP70-203ENST00000544278 ARHGEF26Q96DR7 871 aa17.19■□□□□ 0.34
SNRNP70-203ENST00000544278 FIZ1Q96SL8 496 aa17.19■□□□□ 0.34
SNRNP70-203ENST00000544278 NAP1L4Q99733 375 aaKnown RBP17.19■□□□□ 0.34
SNRNP70-203ENST00000544278 STIM2Q9P246 746 aa17.19■□□□□ 0.34
SNRNP70-203ENST00000544278 ZC3H4Q9UPT8 1303 aaKnown RBP17.19■□□□□ 0.34
SNRNP70-203ENST00000544278 CCDC169A6NNP5 214 aa17.19■□□□□ 0.34
SNRNP70-203ENST00000544278 GALCP54803 685 aa17.19■□□□□ 0.34
SNRNP70-203ENST00000544278 BTNL9Q6UXG8 535 aa17.19■□□□□ 0.34
SNRNP70-203ENST00000544278 ZNF720Q7Z2F6 126 aa17.19■□□□□ 0.34
SNRNP70-203ENST00000544278 TEKT3Q9BXF9 490 aa17.19■□□□□ 0.34
SNRNP70-203ENST00000544278 DPH5Q9H2P9 285 aa17.19■□□□□ 0.34
SNRNP70-203ENST00000544278 TMOD4Q9NZQ9 345 aa17.19■□□□□ 0.34
SNRNP70-203ENST00000544278 ZHX2Q9Y6X8 837 aa17.19■□□□□ 0.34
SNRNP70-203ENST00000544278 FOXN3O00409 490 aaPredicted RBP17.18■□□□□ 0.34
SNRNP70-203ENST00000544278 MRPS9P82933 396 aaKnown RBP17.18■□□□□ 0.34
SNRNP70-203ENST00000544278 RPS6KA1Q15418 735 aa17.18■□□□□ 0.34
SNRNP70-203ENST00000544278 SPDYE2Q495Y8 402 aa17.18■□□□□ 0.34
SNRNP70-203ENST00000544278 CFAP221Q4G0U5 840 aa17.18■□□□□ 0.34
SNRNP70-203ENST00000544278 HS2ST1Q7LGA3 356 aa17.18■□□□□ 0.34
SNRNP70-203ENST00000544278 TAF4BQ92750 862 aa17.18■□□□□ 0.34
SNRNP70-203ENST00000544278 HERC5Q9UII4 1024 aaKnown RBP17.18■□□□□ 0.34
SNRNP70-203ENST00000544278 FAM184BQ9ULE4 1060 aa17.18■□□□□ 0.34
SNRNP70-203ENST00000544278 FMO5P49326 533 aa17.18■□□□□ 0.34
SNRNP70-203ENST00000544278 RPS6P62753 249 aaKnown RBP17.18■□□□□ 0.34
SNRNP70-203ENST00000544278 FAM102BQ5T8I3 360 aa17.18■□□□□ 0.34
SNRNP70-203ENST00000544278 CCDC70Q6NSX1 233 aa17.18■□□□□ 0.34
SNRNP70-203ENST00000544278 FRMD5Q7Z6J6 570 aa17.18■□□□□ 0.34
SNRNP70-203ENST00000544278 NIM1KQ8IY84 436 aa17.18■□□□□ 0.34
SNRNP70-203ENST00000544278 BTBD6Q96KE9 485 aa17.18■□□□□ 0.34
SNRNP70-203ENST00000544278 MRPL11Q9Y3B7 192 aaKnown RBP17.18■□□□□ 0.34
SNRNP70-203ENST00000544278 ZNF536O15090 1300 aa17.18■□□□□ 0.34
SNRNP70-203ENST00000544278 PJA2O43164 708 aa17.17■□□□□ 0.34
SNRNP70-203ENST00000544278 RPL13P26373 211 aaKnown RBP17.17■□□□□ 0.34
SNRNP70-203ENST00000544278 PSMC2P35998 433 aaKnown RBP17.17■□□□□ 0.34
SNRNP70-203ENST00000544278 ICE2Q659A1 982 aa17.17■□□□□ 0.34
SNRNP70-203ENST00000544278 PHLDB3Q6NSJ2 640 aa17.17■□□□□ 0.34
SNRNP70-203ENST00000544278 ARHGEF19Q8IW93 802 aa17.17■□□□□ 0.34
SNRNP70-203ENST00000544278 METTL13Q8N6R0 699 aa17.17■□□□□ 0.34
SNRNP70-203ENST00000544278 CASKIN2Q8WXE0 1202 aa17.17■□□□□ 0.34
SNRNP70-203ENST00000544278 SLC5A5Q92911 643 aa17.17■□□□□ 0.34
SNRNP70-203ENST00000544278 POLR3CQ9BUI4 534 aaPredicted RBP17.17■□□□□ 0.34
SNRNP70-203ENST00000544278 UBE2TQ9NPD8 197 aaPredicted RBP17.17■□□□□ 0.34
SNRNP70-203ENST00000544278 PLCB1Q9NQ66 1216 aa17.17■□□□□ 0.34
SNRNP70-203ENST00000544278 AIPL1Q9NZN9 384 aa17.17■□□□□ 0.34
SNRNP70-203ENST00000544278 AMACRQ9UHK6 382 aa17.17■□□□□ 0.34
SNRNP70-203ENST00000544278 EMSYQ7Z589 1322 aa17.17■□□□□ 0.34
SNRNP70-203ENST00000544278 TBX3O15119 743 aa17.17■□□□□ 0.34
SNRNP70-203ENST00000544278 PPP3CAQ08209 521 aa17.17■□□□□ 0.34
SNRNP70-203ENST00000544278 SEMA3FQ13275 785 aa17.17■□□□□ 0.34
SNRNP70-203ENST00000544278 NBPF12Q5TAG4 269 aaPredicted RBP17.17■□□□□ 0.34
SNRNP70-203ENST00000544278 POTEAQ6S8J7 498 aa17.17■□□□□ 0.34
SNRNP70-203ENST00000544278 EFCC1Q9HA90 598 aa17.17■□□□□ 0.34
SNRNP70-203ENST00000544278 PEX26Q7Z412 305 aa17.17■□□□□ 0.34
SNRNP70-203ENST00000544278 GMLQ99445 158 aa17.17■□□□□ 0.34
SNRNP70-203ENST00000544278 RANBP17Q9H2T7 1088 aaKnown RBP17.17■□□□□ 0.34
SNRNP70-203ENST00000544278 TCEAL9Q9UHQ7 104 aa17.17■□□□□ 0.34
SNRNP70-203ENST00000544278 CTDP1Q9Y5B0 961 aaPredicted RBP17.17■□□□□ 0.34
SNRNP70-203ENST00000544278 BACH1O14867 736 aa17.16■□□□□ 0.34
SNRNP70-203ENST00000544278 VIL1P09327 827 aaKnown RBP17.16■□□□□ 0.34
SNRNP70-203ENST00000544278 CHRM1P11229 460 aaPredicted RBP17.16■□□□□ 0.34
SNRNP70-203ENST00000544278 KCNA3P22001 575 aa17.16■□□□□ 0.34
SNRNP70-203ENST00000544278 MAP2K1Q02750 393 aaPredicted RBP17.16■□□□□ 0.34
SNRNP70-203ENST00000544278 MAPK7Q13164 816 aa17.16■□□□□ 0.34
SNRNP70-203ENST00000544278 MAP9Q49MG5 647 aa17.16■□□□□ 0.34
SNRNP70-203ENST00000544278 MEI1Q5TIA1 1274 aa17.16■□□□□ 0.34
SNRNP70-203ENST00000544278 UHMK1Q8TAS1 419 aaKnown RBP17.16■□□□□ 0.34
SNRNP70-203ENST00000544278 PLEKHO2Q8TD55 490 aa17.16■□□□□ 0.34
SNRNP70-203ENST00000544278 ATG4CQ96DT6 458 aa17.16■□□□□ 0.34
SNRNP70-203ENST00000544278 THAP2Q9H0W7 228 aa17.16■□□□□ 0.34
SNRNP70-203ENST00000544278 FRMD4BQ9Y2L6 1034 aa17.16■□□□□ 0.34
SNRNP70-203ENST00000544278 ATRNL1Q5VV63 1379 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms