RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, human

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-222	ENST00000543695	PRPF6	O94906	941 aa	Known RBP	12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	AFP	P02771	609 aa	Known RBP	12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	NR3C1	P04150	777 aa		12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	PLEK	P08567	350 aa	Predicted RBP	12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	PNMA6A	P0CW24	399 aa	Predicted RBP	12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	FDX1	P10109	184 aa		12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	EPB41	P11171	864 aa	Known RBP	12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	GCLC	P48506	637 aa	Predicted RBP	12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	ZNF131	P52739	623 aa		12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	HMGCS2	P54868	508 aa		12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	GABPB1	Q06547	395 aa	Predicted RBP	12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	KCNH2	Q12809	1159 aa		12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	CTTN	Q14247	550 aa	Known RBP	12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	SH3D19	Q5HYK7	790 aa		12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	TREML2	Q5T2D2	321 aa		12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	HGSNAT	Q68CP4	663 aa		12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	CC2D1A	Q6P1N0	951 aa	Predicted RBP	12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	TPH2	Q8IWU9	490 aa		12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	TRIM58	Q8NG06	486 aa		12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	HNRNPLL	Q8WVV9	542 aa	Known RBP	12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	IFIH1	Q9BYX4	1025 aa	Known RBP	12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	UNC45A	Q9H3U1	944 aa		12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	LUC7L	Q9NQ29	371 aa	Known RBP	12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	FBXO28	Q9NVF7	368 aa		12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	ARMCX3	Q9UH62	379 aa	Predicted RBP	12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	PUF60	Q9UHX1	559 aa	Known RBP	12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	FHOD1	Q9Y613	1164 aa		12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	SAR1B	Q9Y6B6	198 aa		12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	TNRC18	O15417	2968 aa	Predicted RBP	12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	ATP8B3	O60423	1300 aa		12.34	□□□□□ -0.43
LDHA-222	ENST00000543695	GTPBP10	A4D1E9	387 aa	Known RBP	12.33	□□□□□ -0.44
LDHA-222	ENST00000543695	RSPH10B2	B2RC85	870 aa		12.33	□□□□□ -0.44
LDHA-222	ENST00000543695	C19orf81	C9J6K1	198 aa		12.33	□□□□□ -0.44
LDHA-222	ENST00000543695	TNPO2	O14787	897 aa	Known RBP	12.33	□□□□□ -0.44
LDHA-222	ENST00000543695	GCNT3	O95395	438 aa		12.33	□□□□□ -0.44
LDHA-222	ENST00000543695	ATP1A1	P05023	1023 aa	Known RBP	12.33	□□□□□ -0.44
LDHA-222	ENST00000543695	RSPH10B	P0C881	870 aa		12.33	□□□□□ -0.44
LDHA-222	ENST00000543695	AR	P10275	920 aa		12.33	□□□□□ -0.44
LDHA-222	ENST00000543695	PRLR	P16471	622 aa		12.33	□□□□□ -0.44
LDHA-222	ENST00000543695	GUCY2C	P25092	1073 aa		12.33	□□□□□ -0.44
LDHA-222	ENST00000543695	MAGEA1	P43355	309 aa		12.33	□□□□□ -0.44
LDHA-222	ENST00000543695	BACE1	P56817	501 aa		12.33	□□□□□ -0.44
LDHA-222	ENST00000543695	UBXN2A	P68543	259 aa		12.33	□□□□□ -0.44
LDHA-222	ENST00000543695	PRKCZ	Q05513	592 aa		12.33	□□□□□ -0.44
LDHA-222	ENST00000543695	ASIC2	Q16515	512 aa		12.33	□□□□□ -0.44
LDHA-222	ENST00000543695	ANKRD13C	Q8N6S4	541 aa		12.33	□□□□□ -0.44
LDHA-222	ENST00000543695	CLEC4D	Q8WXI8	215 aa		12.33	□□□□□ -0.44
LDHA-222	ENST00000543695	MKNK1	Q9BUB5	465 aa		12.33	□□□□□ -0.44
LDHA-222	ENST00000543695	GBP3	Q9H0R5	595 aa		12.33	□□□□□ -0.44
LDHA-222	ENST00000543695	ANKZF1	Q9H8Y5	726 aa		12.33	□□□□□ -0.44
LDHA-222	ENST00000543695	PARVG	Q9HBI0	331 aa		12.33	□□□□□ -0.44
LDHA-222	ENST00000543695	ARFGAP3	Q9NP61	516 aa		12.33	□□□□□ -0.44
LDHA-222	ENST00000543695	AIPL1	Q9NZN9	384 aa		12.33	□□□□□ -0.44
LDHA-222	ENST00000543695	TMOD4	Q9NZQ9	345 aa		12.33	□□□□□ -0.44
LDHA-222	ENST00000543695	FBXL5	Q9UKA1	691 aa		12.33	□□□□□ -0.44
LDHA-222	ENST00000543695	UBIAD1	Q9Y5Z9	338 aa		12.33	□□□□□ -0.44
LDHA-222	ENST00000543695	ZMYM2	Q9UBW7	1377 aa		12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	IPO5	O00410	1097 aa	Known RBP	12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	CHMP2A	O43633	222 aa		12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	ERLIN1	O75477	346 aa		12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	MAPT	P10636	758 aa	Known RBP	12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	ANXA13	P27216	316 aa		12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	FLT3LG	P49771	235 aa		12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	USP14	P54578	494 aa		12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	POLR2F	P61218	127 aa	Known RBP	12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	FAM193A	P78312	1265 aa		12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	CYP27A1	Q02318	531 aa		12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	MTFR1	Q15390	333 aa		12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	FAM110C	Q1W6H9	321 aa		12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	PCNX4	Q63HM2	1172 aa		12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	DPY19L2P1	Q6NXN4	242 aa		12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	MIER3	Q7Z3K6	550 aa		12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	RNF10	Q8N5U6	811 aa	Known RBP	12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	MYCT1	Q8N699	235 aa		12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	CCDC155	Q8N6L0	562 aa		12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	SLAIN1	Q8ND83	568 aa		12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	PIGO	Q8TEQ8	1089 aa		12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	UBE2Q2	Q8WVN8	375 aa		12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	AGBL1	Q96MI9	1066 aa		12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	ALS2CR12	Q96Q35	445 aa		12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	EPC1	Q9H2F5	836 aa		12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	SLC38A10	Q9HBR0	1119 aa		12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	NLRC4	Q9NPP4	1024 aa		12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	TFR2	Q9UP52	801 aa		12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	JRKL	Q9Y4A0	524 aa		12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	DAAM1	Q9Y4D1	1078 aa		12.32	□□□□□ -0.44
LDHA-222	ENST00000543695	MKI67	P46013	3256 aa	Known RBP	12.31	□□□□□ -0.44
LDHA-222	ENST00000543695	LCT	P09848	1927 aa		12.31	□□□□□ -0.44
LDHA-222	ENST00000543695	ARHGEF35	A5YM69	484 aa		12.31	□□□□□ -0.44
LDHA-222	ENST00000543695	ADCY3	O60266	1144 aa		12.31	□□□□□ -0.44
LDHA-222	ENST00000543695	LYPLA2	O95372	231 aa		12.31	□□□□□ -0.44
LDHA-222	ENST00000543695	XRCC5	P13010	732 aa	Known RBP	12.31	□□□□□ -0.44
LDHA-222	ENST00000543695	MCM3	P25205	808 aa		12.31	□□□□□ -0.44
LDHA-222	ENST00000543695	IRX3	P78415	501 aa	Predicted RBP	12.31	□□□□□ -0.44
LDHA-222	ENST00000543695	MTMR2	Q13614	643 aa		12.31	□□□□□ -0.44
LDHA-222	ENST00000543695	ALCAM	Q13740	583 aa		12.31	□□□□□ -0.44
LDHA-222	ENST00000543695	MYBPC2	Q14324	1141 aa		12.31	□□□□□ -0.44
LDHA-222	ENST00000543695	TDRD12	Q587J7	1177 aa	Known RBP	12.31	□□□□□ -0.44
LDHA-222	ENST00000543695	C10orf76	Q5T2E6	689 aa		12.31	□□□□□ -0.44
LDHA-222	ENST00000543695	IQCE	Q6IPM2	695 aa		12.31	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms