RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 FRMD4BQ9Y2L6 1034 aa15.19■□□□□ 0.02
MSH2-206ENST00000543555 ZHX2Q9Y6X8 837 aa15.19■□□□□ 0.02
MSH2-206ENST00000543555 LOXHD1Q8IVV2 1947 aa15.19■□□□□ 0.02
MSH2-206ENST00000543555 POTEJP0CG39 1038 aa15.19■□□□□ 0.02
MSH2-206ENST00000543555 RPS12P25398 132 aaKnown RBP15.19■□□□□ 0.02
MSH2-206ENST00000543555 ANXA13P27216 316 aa15.19■□□□□ 0.02
MSH2-206ENST00000543555 PAFAH1B1P43034 410 aa15.19■□□□□ 0.02
MSH2-206ENST00000543555 FMO5P49326 533 aa15.19■□□□□ 0.02
MSH2-206ENST00000543555 MTMR1Q13613 665 aa15.19■□□□□ 0.02
MSH2-206ENST00000543555 GJB7Q6PEY0 223 aa15.19■□□□□ 0.02
MSH2-206ENST00000543555 DBR1Q9UK59 544 aaKnown RBP15.19■□□□□ 0.02
MSH2-206ENST00000543555 LRRIQ3A6PVS8 624 aaPredicted RBP15.19■□□□□ 0.02
MSH2-206ENST00000543555 ZMYND10O75800 440 aa15.19■□□□□ 0.02
MSH2-206ENST00000543555 VCAM1P19320 739 aa15.19■□□□□ 0.02
MSH2-206ENST00000543555 MTMR2Q13614 643 aa15.19■□□□□ 0.02
MSH2-206ENST00000543555 SAMD3Q8N6K7 520 aa15.19■□□□□ 0.02
MSH2-206ENST00000543555 TAAR1Q96RJ0 339 aa15.19■□□□□ 0.02
MSH2-206ENST00000543555 SMARCAL1Q9NZC9 954 aa15.19■□□□□ 0.02
MSH2-206ENST00000543555 NAGPAQ9UK23 515 aa15.19■□□□□ 0.02
MSH2-206ENST00000543555 MYH10P35580 1976 aa15.19■□□□□ 0.02
MSH2-206ENST00000543555 RPS6P62753 249 aaKnown RBP15.18■□□□□ 0.02
MSH2-206ENST00000543555 PPP2R5AQ15172 486 aa15.18■□□□□ 0.02
MSH2-206ENST00000543555 SLC9A9Q8IVB4 645 aa15.18■□□□□ 0.02
MSH2-206ENST00000543555 SYCP3Q8IZU3 236 aa15.18■□□□□ 0.02
MSH2-206ENST00000543555 EHD2Q9NZN4 543 aa15.18■□□□□ 0.02
MSH2-206ENST00000543555 SBF1O95248 1867 aa15.18■□□□□ 0.02
MSH2-206ENST00000543555 K7ENM7 598 aa15.18■□□□□ 0.02
MSH2-206ENST00000543555 FTCDO95954 541 aa15.18■□□□□ 0.02
MSH2-206ENST00000543555 EIF2AK2P19525 551 aaKnown RBP15.18■□□□□ 0.02
MSH2-206ENST00000543555 QARSP47897 775 aaKnown RBP15.18■□□□□ 0.02
MSH2-206ENST00000543555 RARRES1P49788 294 aa15.18■□□□□ 0.02
MSH2-206ENST00000543555 MEI1Q5TIA1 1274 aa15.18■□□□□ 0.02
MSH2-206ENST00000543555 CCNI2Q6ZMN8 369 aaPredicted RBP15.18■□□□□ 0.02
MSH2-206ENST00000543555 RPAP3Q9H6T3 665 aaPredicted RBP15.18■□□□□ 0.02
MSH2-206ENST00000543555 TBC1D22BQ9NU19 505 aa15.18■□□□□ 0.02
MSH2-206ENST00000543555 LARSQ9P2J5 1176 aaKnown RBP15.18■□□□□ 0.02
MSH2-206ENST00000543555 RNF14Q9UBS8 474 aa15.18■□□□□ 0.02
MSH2-206ENST00000543555 SAMM50Q9Y512 469 aa15.18■□□□□ 0.02
MSH2-206ENST00000543555 GRID2IPA4D2P6 1211 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 LYPLA2O95372 231 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 FERP16591 822 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 PGM5Q15124 567 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 NBPF12Q5TAG4 269 aaPredicted RBP15.17■□□□□ 0.02
MSH2-206ENST00000543555 ALKBH5Q6P6C2 394 aaKnown RBP15.17■□□□□ 0.02
MSH2-206ENST00000543555 MAEAQ7L5Y9 396 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 RUBCNQ92622 972 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 LRRC1Q9BTT6 524 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 NENFQ9UMX5 172 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 MAPTP10636 758 aaKnown RBP15.17■□□□□ 0.02
MSH2-206ENST00000543555 MYBPC2Q14324 1141 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 CFAP221Q4G0U5 840 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 CBWD6Q4V339 395 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 CBWD3Q5JTY5 395 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 CBWD5Q5RIA9 395 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 DPY19L2Q6NUT2 758 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 ACBD3Q9H3P7 528 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 VIPAS39Q9H9C1 493 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 PNMA2Q9UL42 364 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 CTDP1Q9Y5B0 961 aaPredicted RBP15.17■□□□□ 0.02
MSH2-206ENST00000543555 ATP8B3O60423 1300 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 CENPFP49454 3210 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 EXOC3O60645 756 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 ZBED4O75132 1171 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 TRIM49P0CI25 452 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 TRIM49CP0CI26 452 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 MYBL2P10244 700 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 STAT1P42224 750 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 SPP2Q13103 211 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 ALCAMQ13740 583 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 PLS1Q14651 629 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 VPS36Q86VN1 386 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 MS4A14Q96JA4 679 aa15.17■□□□□ 0.02
MSH2-206ENST00000543555 GFPT2O94808 682 aa15.16■□□□□ 0.02
MSH2-206ENST00000543555 MATR3P43243 847 aaKnown RBP eCLIP15.16■□□□□ 0.02
MSH2-206ENST00000543555 TNNT3P45378 269 aaPredicted RBP15.16■□□□□ 0.02
MSH2-206ENST00000543555 BFSP1Q12934 665 aa15.16■□□□□ 0.02
MSH2-206ENST00000543555 TRERF1Q96PN7 1200 aa15.16■□□□□ 0.02
MSH2-206ENST00000543555 TMEM206Q9H813 350 aa15.16■□□□□ 0.02
MSH2-206ENST00000543555 F8VZ95 297 aa15.16■□□□□ 0.02
MSH2-206ENST00000543555 MYCLP12524 364 aaPredicted RBP15.16■□□□□ 0.02
MSH2-206ENST00000543555 GSPT2Q8IYD1 628 aaKnown RBP15.16■□□□□ 0.02
MSH2-206ENST00000543555 HDAC7Q8WUI4 952 aa15.16■□□□□ 0.02
MSH2-206ENST00000543555 RMDN3Q96TC7 470 aa15.16■□□□□ 0.02
MSH2-206ENST00000543555 PDCD2LQ9BRP1 358 aa15.16■□□□□ 0.02
MSH2-206ENST00000543555 STK33Q9BYT3 514 aa15.16■□□□□ 0.02
MSH2-206ENST00000543555 DMGDHQ9UI17 866 aaKnown RBP15.16■□□□□ 0.02
MSH2-206ENST00000543555 ZHX1Q9UKY1 873 aaPredicted RBP15.16■□□□□ 0.02
MSH2-206ENST00000543555 ADM5C9JUS6 153 aa15.15■□□□□ 0.02
MSH2-206ENST00000543555 EVI5O60447 810 aa15.15■□□□□ 0.02
MSH2-206ENST00000543555 N4BP1O75113 896 aaKnown RBP15.15■□□□□ 0.02
MSH2-206ENST00000543555 PLS3P13797 630 aa15.15■□□□□ 0.02
MSH2-206ENST00000543555 YWHABP31946 246 aaKnown RBP15.15■□□□□ 0.02
MSH2-206ENST00000543555 CYP2C19P33261 490 aa15.15■□□□□ 0.02
MSH2-206ENST00000543555 SOX5P35711 763 aa15.15■□□□□ 0.02
MSH2-206ENST00000543555 RNF207Q6ZRF8 634 aa15.15■□□□□ 0.02
MSH2-206ENST00000543555 INTS2Q9H0H0 1204 aaKnown RBP15.15■□□□□ 0.02
MSH2-206ENST00000543555 PXMP2Q9NR77 195 aa15.15■□□□□ 0.02
MSH2-206ENST00000543555 RBM12Q9NTZ6 932 aaKnown RBP15.15■□□□□ 0.02
MSH2-206ENST00000543555 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.15■□□□□ 0.02
MSH2-206ENST00000543555 DNAJC12Q9UKB3 198 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms