RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 LARP6Q9BRS8 491 aaKnown RBP14.75□□□□□ -0.05
RTN3-213ENST00000543552 PHF20Q9BVI0 1012 aa14.75□□□□□ -0.05
RTN3-213ENST00000543552 NIFKQ9BYG3 293 aaKnown RBP14.75□□□□□ -0.05
RTN3-213ENST00000543552 GCOM2Q9BZD3 368 aaPredicted RBP14.75□□□□□ -0.05
RTN3-213ENST00000543552 TMEM117Q9H0C3 514 aa14.75□□□□□ -0.05
RTN3-213ENST00000543552 ADAMTS10Q9H324 1103 aa14.75□□□□□ -0.05
RTN3-213ENST00000543552 IGFLR1Q9H665 355 aa14.75□□□□□ -0.05
RTN3-213ENST00000543552 BRMS1Q9HCU9 246 aa14.75□□□□□ -0.05
RTN3-213ENST00000543552 HCN4Q9Y3Q4 1203 aa14.75□□□□□ -0.05
RTN3-213ENST00000543552 MYO7AQ13402 2215 aa14.75□□□□□ -0.05
RTN3-213ENST00000543552 ATG2AQ2TAZ0 1938 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 PI4K2BG5E9Z4 385 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 EDIL3O43854 480 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 MARCH6O60337 910 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 PFKFB2O60825 505 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 SRGAP2BP0DMP2 458 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 SFPQP23246 707 aaKnown RBP eCLIP14.74□□□□□ -0.05
RTN3-213ENST00000543552 PPM1AP35813 382 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 LTBRP36941 435 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 PSMC5P62195 406 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 SCRN1Q12765 414 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 CAMK1Q14012 370 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 TARBP2Q15633 366 aaKnown RBP14.74□□□□□ -0.05
RTN3-213ENST00000543552 NPY5RQ15761 445 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 SMAD2Q15796 467 aaKnown RBP14.74□□□□□ -0.05
RTN3-213ENST00000543552 INF2Q27J81 1249 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 MTERF2Q49AM1 385 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 FAM102BQ5T8I3 360 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 PPP4R3AQ6IN85 833 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 B3GNT9Q6UX72 402 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 NEK8Q86SG6 692 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 ADHFE1Q8IWW8 467 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 EFHBQ8N7U6 833 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 COLGALT1Q8NBJ5 622 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 MICAL1Q8TDZ2 1067 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 AIFM3Q96NN9 605 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 INO80BQ9C086 356 aaPredicted RBP14.74□□□□□ -0.05
RTN3-213ENST00000543552 EPHX3Q9H6B9 360 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 TLR9Q9NR96 1032 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 PPP4R2Q9NY27 417 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 PUF60Q9UHX1 559 aaKnown RBP14.74□□□□□ -0.05
RTN3-213ENST00000543552 CD207Q9UJ71 328 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 PPME1Q9Y570 386 aa14.74□□□□□ -0.05
RTN3-213ENST00000543552 FNDC1Q4ZHG4 1894 aaPredicted RBP14.74□□□□□ -0.05
RTN3-213ENST00000543552 CARNS1A5YM72 827 aa14.73□□□□□ -0.05
RTN3-213ENST00000543552 TBX3O15119 743 aa14.73□□□□□ -0.05
RTN3-213ENST00000543552 GPR37L1O60883 481 aa14.73□□□□□ -0.05
RTN3-213ENST00000543552 FGF18O76093 207 aa14.73□□□□□ -0.05
RTN3-213ENST00000543552 FGFR1P11362 822 aa14.73□□□□□ -0.05
RTN3-213ENST00000543552 DNAJB1P25685 340 aa14.73□□□□□ -0.05
RTN3-213ENST00000543552 NRIP1P48552 1158 aa14.73□□□□□ -0.05
RTN3-213ENST00000543552 ZP2Q05996 745 aa14.73□□□□□ -0.05
RTN3-213ENST00000543552 PPP2R5CQ13362 524 aa14.73□□□□□ -0.05
RTN3-213ENST00000543552 ADAM15Q13444 863 aa14.73□□□□□ -0.05
RTN3-213ENST00000543552 ZNF410Q86VK4 478 aa14.73□□□□□ -0.05
RTN3-213ENST00000543552 SLC7A3Q8WY07 619 aa14.73□□□□□ -0.05
RTN3-213ENST00000543552 GJA10Q969M2 543 aa14.73□□□□□ -0.05
RTN3-213ENST00000543552 CDCA3Q99618 268 aaPredicted RBP14.73□□□□□ -0.05
RTN3-213ENST00000543552 MRPL9Q9BYD2 267 aaKnown RBP14.73□□□□□ -0.05
RTN3-213ENST00000543552 TLE6Q9H808 572 aa14.73□□□□□ -0.05
RTN3-213ENST00000543552 CHST12Q9NRB3 414 aa14.73□□□□□ -0.05
RTN3-213ENST00000543552 TYW1Q9NV66 732 aaKnown RBP14.73□□□□□ -0.05
RTN3-213ENST00000543552 KCNJ14Q9UNX9 436 aa14.73□□□□□ -0.05
RTN3-213ENST00000543552 LZTS1Q9Y250 596 aa14.73□□□□□ -0.05
RTN3-213ENST00000543552 DDX11L8A8MPP1 907 aa14.72□□□□□ -0.05
RTN3-213ENST00000543552 CCNT1O60563 726 aaKnown RBP14.72□□□□□ -0.05
RTN3-213ENST00000543552 TBX10O75333 385 aa14.72□□□□□ -0.05
RTN3-213ENST00000543552 EOMESO95936 686 aa14.72□□□□□ -0.05
RTN3-213ENST00000543552 SKIP12755 728 aa14.72□□□□□ -0.05
RTN3-213ENST00000543552 QARSP47897 775 aaKnown RBP14.72□□□□□ -0.05
RTN3-213ENST00000543552 KRT17Q04695 432 aa14.72□□□□□ -0.05
RTN3-213ENST00000543552 CLUL1Q15846 466 aa14.72□□□□□ -0.05
RTN3-213ENST00000543552 ECHDC2Q86YB7 292 aa14.72□□□□□ -0.05
RTN3-213ENST00000543552 RNF169Q8NCN4 708 aa14.72□□□□□ -0.05
RTN3-213ENST00000543552 ZNF558Q96NG5 402 aa14.72□□□□□ -0.05
RTN3-213ENST00000543552 LRFN3Q9BTN0 628 aa14.72□□□□□ -0.05
RTN3-213ENST00000543552 KCNMB3Q9NPA1 279 aa14.72□□□□□ -0.05
RTN3-213ENST00000543552 CD320Q9NPF0 282 aa14.72□□□□□ -0.05
RTN3-213ENST00000543552 ORC3Q9UBD5 711 aaPredicted RBP14.72□□□□□ -0.05
RTN3-213ENST00000543552 TPCN1Q9ULQ1 816 aa14.72□□□□□ -0.05
RTN3-213ENST00000543552 C5orf42Q9H799 3197 aa14.72□□□□□ -0.05
RTN3-213ENST00000543552 IGKV6-21A0A0C4DH24 114 aa14.71□□□□□ -0.05
RTN3-213ENST00000543552 A0A0U1RQF3 1178 aa14.71□□□□□ -0.05
RTN3-213ENST00000543552 MBTPS2O43462 519 aa14.71□□□□□ -0.05
RTN3-213ENST00000543552 DCXO43602 365 aa14.71□□□□□ -0.05
RTN3-213ENST00000543552 SLC37A4O43826 429 aa14.71□□□□□ -0.05
RTN3-213ENST00000543552 MAFO75444 373 aaPredicted RBP14.71□□□□□ -0.05
RTN3-213ENST00000543552 BAG4O95429 457 aaKnown RBP14.71□□□□□ -0.05
RTN3-213ENST00000543552 IRS1P35568 1242 aa14.71□□□□□ -0.05
RTN3-213ENST00000543552 PLCB3Q01970 1234 aa14.71□□□□□ -0.05
RTN3-213ENST00000543552 DLX2Q07687 328 aaPredicted RBP14.71□□□□□ -0.05
RTN3-213ENST00000543552 PIK3AP1Q6ZUJ8 805 aa14.71□□□□□ -0.05
RTN3-213ENST00000543552 SLFN12Q8IYM2 578 aa14.71□□□□□ -0.05
RTN3-213ENST00000543552 NGRNQ9NPE2 291 aaKnown RBP14.71□□□□□ -0.05
RTN3-213ENST00000543552 SUCLA2Q9P2R7 463 aaPredicted RBP14.71□□□□□ -0.05
RTN3-213ENST00000543552 VAV3Q9UKW4 847 aa14.71□□□□□ -0.05
RTN3-213ENST00000543552 ARIH1Q9Y4X5 557 aaPredicted RBP14.71□□□□□ -0.05
RTN3-213ENST00000543552 PLXNA4Q9HCM2 1894 aa14.7□□□□□ -0.06
RTN3-213ENST00000543552 C19orf67A6NJJ6 358 aa14.7□□□□□ -0.06
RTN3-213ENST00000543552 LINC01565O15544 149 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms