RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 PRDM12Q9H4Q4 367 aa18.15■□□□□ 0.5
CIT-212ENST00000543239 SUCLA2Q9P2R7 463 aaPredicted RBP18.15■□□□□ 0.5
CIT-212ENST00000543239 STK24Q9Y6E0 443 aa18.15■□□□□ 0.5
CIT-212ENST00000543239 ZBTB39O15060 712 aa18.14■□□□□ 0.49
CIT-212ENST00000543239 ARHGEF15O94989 841 aa18.14■□□□□ 0.49
CIT-212ENST00000543239 FOSL2P15408 326 aa18.14■□□□□ 0.49
CIT-212ENST00000543239 EMC2Q15006 297 aa18.14■□□□□ 0.49
CIT-212ENST00000543239 CATSPER3Q86XQ3 398 aa18.14■□□□□ 0.49
CIT-212ENST00000543239 IGSF22Q8N9C0 903 aa18.14■□□□□ 0.49
CIT-212ENST00000543239 TCP11Q8WWU5 503 aa18.14■□□□□ 0.49
CIT-212ENST00000543239 CCDC43Q96MW1 224 aaKnown RBP18.14■□□□□ 0.49
CIT-212ENST00000543239 YME1L1Q96TA2 773 aa18.14■□□□□ 0.49
CIT-212ENST00000543239 GCOM2Q9BZD3 368 aaPredicted RBP18.14■□□□□ 0.49
CIT-212ENST00000543239 C1orf112Q9NSG2 853 aa18.14■□□□□ 0.49
CIT-212ENST00000543239 RNF216Q9NWF9 866 aaPredicted RBP18.14■□□□□ 0.49
CIT-212ENST00000543239 LRWD1Q9UFC0 647 aa18.14■□□□□ 0.49
CIT-212ENST00000543239 CHD7Q9P2D1 2997 aa18.14■□□□□ 0.49
CIT-212ENST00000543239 DENND3A2RUS2 1198 aa18.13■□□□□ 0.49
CIT-212ENST00000543239 LINC01553A4QN01 128 aa18.13■□□□□ 0.49
CIT-212ENST00000543239 VPS37CA5D8V6 355 aaPredicted RBP18.13■□□□□ 0.49
CIT-212ENST00000543239 MED24O75448 989 aa18.13■□□□□ 0.49
CIT-212ENST00000543239 DGAT1O75907 488 aa18.13■□□□□ 0.49
CIT-212ENST00000543239 STAG3L1P0CL83 205 aa18.13■□□□□ 0.49
CIT-212ENST00000543239 RARRES1P49788 294 aa18.13■□□□□ 0.49
CIT-212ENST00000543239 ATP2C1P98194 919 aaPredicted RBP18.13■□□□□ 0.49
CIT-212ENST00000543239 RHPN2Q8IUC4 686 aa18.13■□□□□ 0.49
CIT-212ENST00000543239 NPAS4Q8IUM7 802 aa18.13■□□□□ 0.49
CIT-212ENST00000543239 CRIPAKQ8N1N5 446 aa18.13■□□□□ 0.49
CIT-212ENST00000543239 PSPC1Q8WXF1 523 aaKnown RBP18.13■□□□□ 0.49
CIT-212ENST00000543239 NACC1Q96RE7 527 aa18.13■□□□□ 0.49
CIT-212ENST00000543239 MTRQ99707 1265 aa18.13■□□□□ 0.49
CIT-212ENST00000543239 INO80BQ9C086 356 aaPredicted RBP18.13■□□□□ 0.49
CIT-212ENST00000543239 RC3H2Q9HBD1 1191 aaKnown RBP18.13■□□□□ 0.49
CIT-212ENST00000543239 RGS18Q9NS28 235 aa18.13■□□□□ 0.49
CIT-212ENST00000543239 DBR1Q9UK59 544 aaKnown RBP18.13■□□□□ 0.49
CIT-212ENST00000543239 COL4A3BPQ9Y5P4 624 aa18.13■□□□□ 0.49
CIT-212ENST00000543239 TTC3P53804 2025 aa18.13■□□□□ 0.49
CIT-212ENST00000543239 A0A087WZ62 844 aa18.12■□□□□ 0.49
CIT-212ENST00000543239 ASAP2O43150 1006 aa18.12■□□□□ 0.49
CIT-212ENST00000543239 MGEA5O60502 916 aa18.12■□□□□ 0.49
CIT-212ENST00000543239 SYT1P21579 422 aa18.12■□□□□ 0.49
CIT-212ENST00000543239 SARSP49591 514 aaKnown RBP18.12■□□□□ 0.49
CIT-212ENST00000543239 ERVK-21P61565 698 aa18.12■□□□□ 0.49
CIT-212ENST00000543239 DTHD1Q6ZMT9 781 aa18.12■□□□□ 0.49
CIT-212ENST00000543239 SLC24A5Q71RS6 500 aa18.12■□□□□ 0.49
CIT-212ENST00000543239 HSCBQ8IWL3 235 aa18.12■□□□□ 0.49
CIT-212ENST00000543239 PIGOQ8TEQ8 1089 aa18.12■□□□□ 0.49
CIT-212ENST00000543239 ZNF668Q96K58 619 aaPredicted RBP18.12■□□□□ 0.49
CIT-212ENST00000543239 TGS1Q96RS0 853 aaKnown RBP18.12■□□□□ 0.49
CIT-212ENST00000543239 ADAM2Q99965 735 aa18.12■□□□□ 0.49
CIT-212ENST00000543239 FDXACB1Q9BRP7 624 aaPredicted RBP18.12■□□□□ 0.49
CIT-212ENST00000543239 ATP6V0A4Q9HBG4 840 aa18.12■□□□□ 0.49
CIT-212ENST00000543239 CDH23Q9H251 3354 aa18.11■□□□□ 0.49
CIT-212ENST00000543239 DGKIO75912 1065 aa18.11■□□□□ 0.49
CIT-212ENST00000543239 SFPQP23246 707 aaKnown RBP eCLIP18.11■□□□□ 0.49
CIT-212ENST00000543239 DSC3Q14574 896 aa18.11■□□□□ 0.49
CIT-212ENST00000543239 ARL6IP4Q66PJ3 421 aaKnown RBP18.11■□□□□ 0.49
CIT-212ENST00000543239 POTEGQ6S5H5 508 aa18.11■□□□□ 0.49
CIT-212ENST00000543239 PRPF31Q8WWY3 499 aaKnown RBP18.11■□□□□ 0.49
CIT-212ENST00000543239 ARNTL2Q8WYA1 636 aa18.11■□□□□ 0.49
CIT-212ENST00000543239 TMEM143Q96AN5 459 aa18.11■□□□□ 0.49
CIT-212ENST00000543239 ZNF689Q96CS4 500 aaPredicted RBP18.11■□□□□ 0.49
CIT-212ENST00000543239 SAMD11Q96NU1 681 aa18.11■□□□□ 0.49
CIT-212ENST00000543239 XPNPEP1Q9NQW7 623 aa18.11■□□□□ 0.49
CIT-212ENST00000543239 ADGRA3Q8IWK6 1321 aa18.11■□□□□ 0.49
CIT-212ENST00000543239 C9IYK1 514 aa18.1■□□□□ 0.49
CIT-212ENST00000543239 BMP15O95972 392 aa18.1■□□□□ 0.49
CIT-212ENST00000543239 ZSCAN20P17040 1043 aaPredicted RBP18.1■□□□□ 0.49
CIT-212ENST00000543239 CCT6AP40227 531 aaKnown RBP18.1■□□□□ 0.49
CIT-212ENST00000543239 LAMTOR4Q0VGL1 99 aa18.1■□□□□ 0.49
CIT-212ENST00000543239 MXD4Q14582 209 aaPredicted RBP18.1■□□□□ 0.49
CIT-212ENST00000543239 FERMT3Q86UX7 667 aa18.1■□□□□ 0.49
CIT-212ENST00000543239 MAFAQ8NHW3 353 aaPredicted RBP18.1■□□□□ 0.49
CIT-212ENST00000543239 NLRP4Q96MN2 994 aa18.1■□□□□ 0.49
CIT-212ENST00000543239 CERS4Q9HA82 394 aa18.1■□□□□ 0.49
CIT-212ENST00000543239 IFT122Q9HBG6 1241 aa18.1■□□□□ 0.49
CIT-212ENST00000543239 BMP2KQ9NSY1 1161 aaPredicted RBP18.1■□□□□ 0.49
CIT-212ENST00000543239 LRFN2Q9ULH4 789 aa18.1■□□□□ 0.49
CIT-212ENST00000543239 POU3F3P20264 500 aaPredicted RBP18.09■□□□□ 0.49
CIT-212ENST00000543239 FAM189BP81408 668 aa18.09■□□□□ 0.49
CIT-212ENST00000543239 ADGRE1Q14246 886 aa18.09■□□□□ 0.49
CIT-212ENST00000543239 IL17AQ16552 155 aa18.09■□□□□ 0.49
CIT-212ENST00000543239 KRT79Q5XKE5 535 aa18.09■□□□□ 0.49
CIT-212ENST00000543239 SPRED2Q7Z698 418 aa18.09■□□□□ 0.49
CIT-212ENST00000543239 SRGAP1Q7Z6B7 1085 aa18.09■□□□□ 0.49
CIT-212ENST00000543239 KSR1Q8IVT5 923 aa18.09■□□□□ 0.49
CIT-212ENST00000543239 FIBCD1Q8N539 461 aa18.09■□□□□ 0.49
CIT-212ENST00000543239 SNX29Q8TEQ0 813 aa18.09■□□□□ 0.49
CIT-212ENST00000543239 ELAC1Q9H777 363 aaKnown RBP18.09■□□□□ 0.49
CIT-212ENST00000543239 CHST12Q9NRB3 414 aa18.09■□□□□ 0.49
CIT-212ENST00000543239 PCDHB7Q9Y5E2 793 aa18.09■□□□□ 0.49
CIT-212ENST00000543239 COL6A3P12111 3177 aa18.09■□□□□ 0.49
CIT-212ENST00000543239 EPOPA6NHQ4 379 aa18.08■□□□□ 0.48
CIT-212ENST00000543239 USO1O60763 962 aaKnown RBP18.08■□□□□ 0.48
CIT-212ENST00000543239 POU5F1BQ06416 359 aa18.08■□□□□ 0.48
CIT-212ENST00000543239 TFDP1Q14186 410 aa18.08■□□□□ 0.48
CIT-212ENST00000543239 CMTR2Q8IYT2 770 aaKnown RBP18.08■□□□□ 0.48
CIT-212ENST00000543239 MCPH1Q8NEM0 835 aa18.08■□□□□ 0.48
CIT-212ENST00000543239 FOXD4L1Q9NU39 408 aa18.08■□□□□ 0.48
CIT-212ENST00000543239 TMEM161AQ9NX61 479 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms