RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 RASSF8Q8NHQ8 419 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 SPIRE2Q8WWL2 714 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 PRPF31Q8WWY3 499 aaKnown RBP6.51□□□□□ -1.37
ABCF1-207ENST00000542772 STAMQ92783 540 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 KIFAP3Q92845 792 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 CCDC34Q96HJ3 373 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 GSDMAQ96QA5 445 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 STRA6Q9BX79 667 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 NFKBIZQ9BYH8 718 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 ADAMTS10Q9H324 1103 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 ST6GALNAC4Q9H4F1 302 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 ATP6V0A4Q9HBG4 840 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 OLFML3Q9NRN5 406 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 KIAA1468Q9P260 1216 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 HOOK1Q9UJC3 728 aaKnown RBP6.51□□□□□ -1.37
ABCF1-207ENST00000542772 PCDHA5Q9Y5H7 936 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 SQORQ9Y6N5 450 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 NPHP3-ACAD11A0A0J9YXS1 232 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 SFI1A8K8P3 1242 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 DCDC2CA8MYV0 355 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 TRAK2O60296 914 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 USO1O60763 962 aaKnown RBP6.5□□□□□ -1.37
ABCF1-207ENST00000542772 KINO60870 393 aaKnown RBP6.5□□□□□ -1.37
ABCF1-207ENST00000542772 HIP1RO75146 1068 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 RHOBTB3O94955 611 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 CHRNA1P02708 482 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 CYP2C9P11712 490 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 PLS3P13797 630 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 GAP43P17677 238 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 GLRA2P23416 452 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 NAMPTP43490 491 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 AFMP43652 599 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 GPC3P51654 580 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 CRYBB1P53674 252 aaPredicted RBP6.5□□□□□ -1.37
ABCF1-207ENST00000542772 NCKAP1LP55160 1127 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 IGBP1P78318 339 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 TLE2Q04725 743 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 MGAT3Q09327 533 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 LAMTOR4Q0VGL1 99 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 DHX8Q14562 1220 aaKnown RBP6.5□□□□□ -1.37
ABCF1-207ENST00000542772 LRRC26Q2I0M4 334 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 COBLL1Q53SF7 1204 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 TRAF7Q6Q0C0 670 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 RUFY4Q6ZNE9 571 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 DYMQ7RTS9 669 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 ZNF720Q7Z2F6 126 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 ZNF410Q86VK4 478 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 TNS4Q8IZW8 715 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 CAGE1Q8TC20 777 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 ZNF507Q8TCN5 953 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 PPP1R13LQ8WUF5 828 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 DNAJB3Q8WWF6 145 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 DHX38Q92620 1227 aaKnown RBP6.5□□□□□ -1.37
ABCF1-207ENST00000542772 WNT8BQ93098 351 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 TMEM143Q96AN5 459 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 ZBTB10Q96DT7 871 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 DRC1Q96MC2 740 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 REEP2Q9BRK0 252 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 CELF4Q9BZC1 486 aaKnown RBP6.5□□□□□ -1.37
ABCF1-207ENST00000542772 GTPBP4Q9BZE4 634 aaKnown RBP6.5□□□□□ -1.37
ABCF1-207ENST00000542772 TRPV6Q9H1D0 765 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 BLZF1Q9H2G9 400 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 CLSTN2Q9H4D0 955 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 TMEM134Q9H6X4 195 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 SUGCTQ9HAC7 445 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 IFT122Q9HBG6 1241 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 POLD4Q9HCU8 107 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 TRMT13Q9NUP7 481 aaKnown RBP6.5□□□□□ -1.37
ABCF1-207ENST00000542772 PANK4Q9NVE7 773 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 TMEM63CQ9P1W3 806 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 LARSQ9P2J5 1176 aaKnown RBP6.5□□□□□ -1.37
ABCF1-207ENST00000542772 SUCLA2Q9P2R7 463 aaPredicted RBP6.5□□□□□ -1.37
ABCF1-207ENST00000542772 SEL1LQ9UBV2 794 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 COL4A3BPQ9Y5P4 624 aa6.5□□□□□ -1.37
ABCF1-207ENST00000542772 MYH11P35749 1972 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 RSPH10B2B2RC85 870 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 PITPNM1O00562 1244 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 KIAA0355O15063 1070 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 TLR3O15455 904 aaKnown RBP6.49□□□□□ -1.37
ABCF1-207ENST00000542772 PPP1R37O75864 691 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 LETM1O95202 739 aaPredicted RBP6.49□□□□□ -1.37
ABCF1-207ENST00000542772 PARNO95453 639 aaKnown RBP6.49□□□□□ -1.37
ABCF1-207ENST00000542772 RPN1P04843 607 aaKnown RBP6.49□□□□□ -1.37
ABCF1-207ENST00000542772 SSBP05455 408 aaKnown RBP eCLIP6.49□□□□□ -1.37
ABCF1-207ENST00000542772 PRR29P0C7W0 189 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 RSPH10BP0C881 870 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 CKBP12277 381 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 BMP6P22004 513 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 CASP1P29466 404 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 ABCD1P33897 745 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 NPTX2P47972 431 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 CLCN3P51790 818 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 ATN1P54259 1190 aaPredicted RBP6.49□□□□□ -1.37
ABCF1-207ENST00000542772 SOX10P56693 466 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 CHMP4BP1P59074 171 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 PTENP60484 403 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 GTF2BQ00403 316 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 PNOCQ13519 176 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 GPNMBQ14956 572 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 PPP2R5AQ15172 486 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms