RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 RSPH1Q8WYR4 309 aa17.57■□□□□ 0.4
VPS33A-206ENST00000542310 GTF3C6Q969F1 213 aa17.57■□□□□ 0.4
VPS33A-206ENST00000542310 CEP89Q96ST8 783 aa17.57■□□□□ 0.4
VPS33A-206ENST00000542310 JPH2Q9BR39 696 aaPredicted RBP17.57■□□□□ 0.4
VPS33A-206ENST00000542310 ALG13Q9NP73 1137 aaKnown RBP17.57■□□□□ 0.4
VPS33A-206ENST00000542310 VAV3Q9UKW4 847 aa17.57■□□□□ 0.4
VPS33A-206ENST00000542310 PCDHB12Q9Y5F1 795 aa17.57■□□□□ 0.4
VPS33A-206ENST00000542310 FSD2A1L4K1 749 aa17.56■□□□□ 0.4
VPS33A-206ENST00000542310 TBKBP1A7MCY6 615 aa17.56■□□□□ 0.4
VPS33A-206ENST00000542310 H3BQ06 376 aaPredicted RBP17.56■□□□□ 0.4
VPS33A-206ENST00000542310 CTDNEP1O95476 244 aa17.56■□□□□ 0.4
VPS33A-206ENST00000542310 IL9P15248 144 aa17.56■□□□□ 0.4
VPS33A-206ENST00000542310 ZSCAN20P17040 1043 aaPredicted RBP17.56■□□□□ 0.4
VPS33A-206ENST00000542310 LAG3P18627 525 aa17.56■□□□□ 0.4
VPS33A-206ENST00000542310 MTERF2Q49AM1 385 aa17.56■□□□□ 0.4
VPS33A-206ENST00000542310 ZNF410Q86VK4 478 aa17.56■□□□□ 0.4
VPS33A-206ENST00000542310 POF1BQ8WVV4 589 aa17.56■□□□□ 0.4
VPS33A-206ENST00000542310 SCLT1Q96NL6 688 aa17.56■□□□□ 0.4
VPS33A-206ENST00000542310 TMEM117Q9H0C3 514 aa17.56■□□□□ 0.4
VPS33A-206ENST00000542310 BRMS1Q9HCU9 246 aa17.56■□□□□ 0.4
VPS33A-206ENST00000542310 ORC3Q9UBD5 711 aaPredicted RBP17.56■□□□□ 0.4
VPS33A-206ENST00000542310 PRKAG3Q9UGI9 489 aa17.56■□□□□ 0.4
VPS33A-206ENST00000542310 DNAJB1P25685 340 aa17.55■□□□□ 0.4
VPS33A-206ENST00000542310 LTBRP36941 435 aa17.55■□□□□ 0.4
VPS33A-206ENST00000542310 DNM2P50570 870 aa17.55■□□□□ 0.4
VPS33A-206ENST00000542310 FAM102BQ5T8I3 360 aa17.55■□□□□ 0.4
VPS33A-206ENST00000542310 LRRC43Q8N309 656 aa17.55■□□□□ 0.4
VPS33A-206ENST00000542310 NLRP7Q8WX94 980 aa17.55■□□□□ 0.4
VPS33A-206ENST00000542310 GCOM2Q9BZD3 368 aaPredicted RBP17.55■□□□□ 0.4
VPS33A-206ENST00000542310 DACT1Q9NYF0 836 aa17.55■□□□□ 0.4
VPS33A-206ENST00000542310 CCNT1O60563 726 aaKnown RBP17.54■□□□□ 0.4
VPS33A-206ENST00000542310 MAFO75444 373 aaPredicted RBP17.54■□□□□ 0.4
VPS33A-206ENST00000542310 FGFR1P11362 822 aa17.54■□□□□ 0.4
VPS33A-206ENST00000542310 KRT2P35908 639 aa17.54■□□□□ 0.4
VPS33A-206ENST00000542310 QARSP47897 775 aaKnown RBP17.54■□□□□ 0.4
VPS33A-206ENST00000542310 SPOUT1Q5T280 376 aaKnown RBP17.54■□□□□ 0.4
VPS33A-206ENST00000542310 PDE12Q6L8Q7 609 aaKnown RBP17.54■□□□□ 0.4
VPS33A-206ENST00000542310 PIK3AP1Q6ZUJ8 805 aa17.54■□□□□ 0.4
VPS33A-206ENST00000542310 ANO5Q75V66 913 aa17.54■□□□□ 0.4
VPS33A-206ENST00000542310 ECHDC2Q86YB7 292 aa17.54■□□□□ 0.4
VPS33A-206ENST00000542310 EXOC8Q8IYI6 725 aa17.54■□□□□ 0.4
VPS33A-206ENST00000542310 COLGALT1Q8NBJ5 622 aa17.54■□□□□ 0.4
VPS33A-206ENST00000542310 TRAIPQ9BWF2 469 aa17.54■□□□□ 0.4
VPS33A-206ENST00000542310 CWH43Q9H720 699 aa17.54■□□□□ 0.4
VPS33A-206ENST00000542310 CHST12Q9NRB3 414 aa17.54■□□□□ 0.4
VPS33A-206ENST00000542310 LZTS1Q9Y250 596 aa17.54■□□□□ 0.4
VPS33A-206ENST00000542310 EML1O00423 815 aa17.53■□□□□ 0.4
VPS33A-206ENST00000542310 GAS2O43903 313 aaKnown RBP17.53■□□□□ 0.4
VPS33A-206ENST00000542310 TBX10O75333 385 aa17.53■□□□□ 0.4
VPS33A-206ENST00000542310 P4HBP07237 508 aaKnown RBP17.53■□□□□ 0.4
VPS33A-206ENST00000542310 IBSPP21815 317 aaPredicted RBP17.53■□□□□ 0.4
VPS33A-206ENST00000542310 SFPQP23246 707 aaKnown RBP eCLIP17.53■□□□□ 0.4
VPS33A-206ENST00000542310 DRP2Q13474 957 aa17.53■□□□□ 0.4
VPS33A-206ENST00000542310 SMAD4Q13485 552 aaKnown RBP17.53■□□□□ 0.4
VPS33A-206ENST00000542310 ME3Q16798 604 aa17.53■□□□□ 0.4
VPS33A-206ENST00000542310 EP400NLQ6ZTU2 488 aa17.53■□□□□ 0.4
VPS33A-206ENST00000542310 SLFN12Q8IYM2 578 aa17.53■□□□□ 0.4
VPS33A-206ENST00000542310 ABI1Q8IZP0 508 aa17.53■□□□□ 0.4
VPS33A-206ENST00000542310 GJD3Q8N144 294 aa17.53■□□□□ 0.4
VPS33A-206ENST00000542310 EFHBQ8N7U6 833 aa17.53■□□□□ 0.4
VPS33A-206ENST00000542310 OXER1Q8TDS5 423 aa17.53■□□□□ 0.4
VPS33A-206ENST00000542310 HAS1Q92839 578 aa17.53■□□□□ 0.4
VPS33A-206ENST00000542310 TNFRSF25Q93038 417 aa17.53■□□□□ 0.4
VPS33A-206ENST00000542310 INO80BQ9C086 356 aaPredicted RBP17.53■□□□□ 0.4
VPS33A-206ENST00000542310 TLR9Q9NR96 1032 aa17.53■□□□□ 0.4
VPS33A-206ENST00000542310 RNF19AQ9NV58 838 aa17.53■□□□□ 0.4
VPS33A-206ENST00000542310 TYW1Q9NV66 732 aaKnown RBP17.53■□□□□ 0.4
VPS33A-206ENST00000542310 A0A0U1RQF3 1178 aa17.52■□□□□ 0.4
VPS33A-206ENST00000542310 TMEM150BA6NC51 233 aa17.52■□□□□ 0.4
VPS33A-206ENST00000542310 DDX11L8A8MPP1 907 aa17.52■□□□□ 0.4
VPS33A-206ENST00000542310 FGF18O76093 207 aa17.52■□□□□ 0.4
VPS33A-206ENST00000542310 EOMESO95936 686 aa17.52■□□□□ 0.4
VPS33A-206ENST00000542310 FDPSP14324 419 aaKnown RBP17.52■□□□□ 0.4
VPS33A-206ENST00000542310 COL9A1P20849 921 aa17.52■□□□□ 0.4
VPS33A-206ENST00000542310 IRS1P35568 1242 aa17.52■□□□□ 0.4
VPS33A-206ENST00000542310 PPM1AP35813 382 aa17.52■□□□□ 0.4
VPS33A-206ENST00000542310 PLCB3Q01970 1234 aa17.52■□□□□ 0.4
VPS33A-206ENST00000542310 ADAM15Q13444 863 aa17.52■□□□□ 0.4
VPS33A-206ENST00000542310 ZNF598Q86UK7 904 aaKnown RBP17.52■□□□□ 0.4
VPS33A-206ENST00000542310 POTEDQ86YR6 584 aa17.52■□□□□ 0.4
VPS33A-206ENST00000542310 C4orf19Q8IY42 314 aa17.52■□□□□ 0.4
VPS33A-206ENST00000542310 THNSL1Q8IYQ7 743 aa17.52■□□□□ 0.4
VPS33A-206ENST00000542310 NSUN7Q8NE18 718 aaKnown RBP17.52■□□□□ 0.4
VPS33A-206ENST00000542310 SLC7A3Q8WY07 619 aa17.52■□□□□ 0.4
VPS33A-206ENST00000542310 CASD1Q96PB1 797 aa17.52■□□□□ 0.4
VPS33A-206ENST00000542310 POP1Q99575 1024 aaKnown RBP17.52■□□□□ 0.4
VPS33A-206ENST00000542310 CDCA3Q99618 268 aaPredicted RBP17.52■□□□□ 0.4
VPS33A-206ENST00000542310 MRPL9Q9BYD2 267 aaKnown RBP17.52■□□□□ 0.4
VPS33A-206ENST00000542310 CD320Q9NPF0 282 aa17.52■□□□□ 0.4
VPS33A-206ENST00000542310 CYP26B1Q9NR63 512 aa17.52■□□□□ 0.4
VPS33A-206ENST00000542310 GJB4Q9NTQ9 266 aa17.52■□□□□ 0.4
VPS33A-206ENST00000542310 CARNS1A5YM72 827 aa17.51■□□□□ 0.39
VPS33A-206ENST00000542310 PI4K2BG5E9Z4 385 aa17.51■□□□□ 0.39
VPS33A-206ENST00000542310 BAG4O95429 457 aaKnown RBP17.51■□□□□ 0.39
VPS33A-206ENST00000542310 LARGE1O95461 756 aa17.51■□□□□ 0.39
VPS33A-206ENST00000542310 SKIP12755 728 aa17.51■□□□□ 0.39
VPS33A-206ENST00000542310 RFC5P40937 340 aa17.51■□□□□ 0.39
VPS33A-206ENST00000542310 ZP2Q05996 745 aa17.51■□□□□ 0.39
VPS33A-206ENST00000542310 SPIRE1Q08AE8 756 aa17.51■□□□□ 0.39
VPS33A-206ENST00000542310 EPHA7Q15375 998 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms