RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 WDR62O43379 1518 aa6.75□□□□□ -1.33
DMD-228ENST00000541735 URB2Q14146 1524 aaKnown RBP6.75□□□□□ -1.33
DMD-228ENST00000541735 AP1G2O75843 785 aa6.75□□□□□ -1.33
DMD-228ENST00000541735 CYP7B1O75881 506 aa6.75□□□□□ -1.33
DMD-228ENST00000541735 DCTN3O75935 186 aa6.75□□□□□ -1.33
DMD-228ENST00000541735 PLS3P13797 630 aa6.75□□□□□ -1.33
DMD-228ENST00000541735 TCF3P15923 654 aa6.75□□□□□ -1.33
DMD-228ENST00000541735 CDK8P49336 464 aa6.75□□□□□ -1.33
DMD-228ENST00000541735 TSNAXIP1Q2TAA8 658 aa6.75□□□□□ -1.33
DMD-228ENST00000541735 MIIPQ5JXC2 388 aa6.75□□□□□ -1.33
DMD-228ENST00000541735 RNF180Q86T96 592 aa6.75□□□□□ -1.33
DMD-228ENST00000541735 GRAMD1CQ8IYS0 662 aa6.75□□□□□ -1.33
DMD-228ENST00000541735 TRIML2Q8N7C3 387 aa6.75□□□□□ -1.33
DMD-228ENST00000541735 CCDC90BQ9GZT6 254 aa6.75□□□□□ -1.33
DMD-228ENST00000541735 TRIM45Q9H8W5 580 aaPredicted RBP6.75□□□□□ -1.33
DMD-228ENST00000541735 ABI2Q9NYB9 513 aaPredicted RBP6.75□□□□□ -1.33
DMD-228ENST00000541735 APPL1Q9UKG1 709 aa6.75□□□□□ -1.33
DMD-228ENST00000541735 KCNQ2O43526 872 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 SF3B3Q15393 1217 aaKnown RBP6.74□□□□□ -1.33
DMD-228ENST00000541735 CATSPER3Q86XQ3 398 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 PHACTR4Q8IZ21 702 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 LCORLQ8N3X6 602 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 TEX12Q9BXU0 123 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 VPS11Q9H270 941 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 TOPBP1Q92547 1522 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 KCNA2P16389 499 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 PAPOLAP51003 745 aaKnown RBP6.74□□□□□ -1.33
DMD-228ENST00000541735 NLRP12P59046 1061 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 TBL3Q12788 808 aaKnown RBP6.74□□□□□ -1.33
DMD-228ENST00000541735 TSC22D1Q15714 1073 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 AMHR2Q16671 573 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 GPATCH4Q5T3I0 446 aaKnown RBP6.74□□□□□ -1.33
DMD-228ENST00000541735 PLEKHM2Q8IWE5 1019 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 STN1Q9H668 368 aaKnown RBP6.74□□□□□ -1.33
DMD-228ENST00000541735 ATP6V0A4Q9HBG4 840 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 ALKBH4Q9NXW9 302 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 KLK14Q9P0G3 267 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 BCAP29Q9UHQ4 241 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 CPA4Q9UI42 421 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 LZTS3O60299 673 aaPredicted RBP6.74□□□□□ -1.33
DMD-228ENST00000541735 FGAP02671 866 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 RGS7P49802 495 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 GRAPQ13588 217 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 TXNRD1Q16881 649 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 TMEM270Q6UE05 265 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 SCYL3Q8IZE3 742 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 SNX31Q8N9S9 440 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 LEMD2Q8NC56 503 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 GRAPLQ8TC17 118 aaPredicted RBP6.74□□□□□ -1.33
DMD-228ENST00000541735 PABPC5Q96DU9 382 aaKnown RBP6.74□□□□□ -1.33
DMD-228ENST00000541735 SAAL1Q96ER3 474 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 CNOT6LQ96LI5 555 aaKnown RBP6.74□□□□□ -1.33
DMD-228ENST00000541735 PARK7Q99497 189 aaKnown RBP6.74□□□□□ -1.33
DMD-228ENST00000541735 FAM167BQ9BTA0 163 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 WDR11Q9BZH6 1224 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 CIPCQ9C0C6 399 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 CYP27B1O15528 508 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 GUCA1CO95843 209 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 ERVK-10P10266 1014 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 KCTD16Q68DU8 428 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 TMC7Q7Z402 723 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 ENOX1Q8TC92 643 aaKnown RBP6.74□□□□□ -1.33
DMD-228ENST00000541735 LARP4BQ92615 738 aaKnown RBP6.74□□□□□ -1.33
DMD-228ENST00000541735 ACAP3Q96P50 834 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 ZRANB2O95218 330 aaKnown RBP eCLIP6.74□□□□□ -1.33
DMD-228ENST00000541735 STAT3P40763 770 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 ANKS6Q68DC2 871 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 SLC25A41Q8N5S1 370 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 TBC1D19Q8N5T2 526 aa6.74□□□□□ -1.33
DMD-228ENST00000541735 TTC7AQ9ULT0 858 aaPredicted RBP6.74□□□□□ -1.33
DMD-228ENST00000541735 USP17L15C9J2P7 530 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 USP17L13C9JLJ4 530 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 USP17L11C9JVI0 530 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 USP17L18D6R9N7 530 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 USP17L22D6RA61 530 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 USP17L17D6RBQ6 530 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 USP17L19D6RCP7 530 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 USP17L20D6RJB6 530 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 MYO1DO94832 1006 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 CAVIN2O95810 425 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 AKAP5P24588 427 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 SKOR1P84550 965 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 USP17L24Q0WX57 530 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 KYNUQ16719 465 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 CYP4A22Q5TCH4 519 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 SUSD4Q5VX71 490 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 USP17L6PQ6QN14 398 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 TMTC3Q6ZXV5 915 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 DHX38Q92620 1227 aaKnown RBP6.73□□□□□ -1.33
DMD-228ENST00000541735 TMEM169Q96HH4 297 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 GLT1D1Q96MS3 346 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 TSEN34Q9BSV6 310 aaKnown RBP6.73□□□□□ -1.33
DMD-228ENST00000541735 POLR3FQ9H1D9 316 aaPredicted RBP6.73□□□□□ -1.33
DMD-228ENST00000541735 DHX35Q9H5Z1 703 aaKnown RBP6.73□□□□□ -1.33
DMD-228ENST00000541735 PARVGQ9HBI0 331 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 KLHL14Q9P2G3 628 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 EPS15L1Q9UBC2 864 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 SUN2Q9UH99 717 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 SETSIPP0DME0 302 aa6.73□□□□□ -1.33
DMD-228ENST00000541735 UVSSAQ2YD98 709 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms