RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 FBXL5Q9UKA1 691 aa14.74□□□□□ -0.05
PTPN1-202ENST00000541713 DDX60LQ5H9U9 1706 aaKnown RBP14.73□□□□□ -0.05
PTPN1-202ENST00000541713 hCG_1984214I3L0E3 225 aa14.73□□□□□ -0.05
PTPN1-202ENST00000541713 GNA14O95837 355 aa14.73□□□□□ -0.05
PTPN1-202ENST00000541713 HHIPL2Q6UWX4 724 aa14.73□□□□□ -0.05
PTPN1-202ENST00000541713 ZNF713Q8N859 430 aaPredicted RBP14.73□□□□□ -0.05
PTPN1-202ENST00000541713 MLXIPLQ9NP71 852 aa14.73□□□□□ -0.05
PTPN1-202ENST00000541713 NOVA2Q9UNW9 492 aaKnown RBP14.73□□□□□ -0.05
PTPN1-202ENST00000541713 CTDP1Q9Y5B0 961 aaPredicted RBP14.73□□□□□ -0.05
PTPN1-202ENST00000541713 FOXO6A8MYZ6 492 aa14.73□□□□□ -0.05
PTPN1-202ENST00000541713 PDE6BP35913 854 aa14.73□□□□□ -0.05
PTPN1-202ENST00000541713 KRT71Q3SY84 523 aa14.73□□□□□ -0.05
PTPN1-202ENST00000541713 LLGL2Q6P1M3 1020 aa14.73□□□□□ -0.05
PTPN1-202ENST00000541713 ZDHHC15Q96MV8 337 aa14.73□□□□□ -0.05
PTPN1-202ENST00000541713 MYH1P12882 1939 aa14.72□□□□□ -0.05
PTPN1-202ENST00000541713 IPO5O00410 1097 aaKnown RBP14.72□□□□□ -0.05
PTPN1-202ENST00000541713 PEX10O60683 326 aa14.72□□□□□ -0.05
PTPN1-202ENST00000541713 PPFIA4O75335 1185 aa14.72□□□□□ -0.05
PTPN1-202ENST00000541713 ECM2O94769 699 aaPredicted RBP14.72□□□□□ -0.05
PTPN1-202ENST00000541713 NF2P35240 595 aa14.72□□□□□ -0.05
PTPN1-202ENST00000541713 PEX3P56589 373 aa14.72□□□□□ -0.05
PTPN1-202ENST00000541713 PPFIA1Q13136 1202 aa14.72□□□□□ -0.05
PTPN1-202ENST00000541713 EPHA7Q15375 998 aa14.72□□□□□ -0.05
PTPN1-202ENST00000541713 DLGAP5Q15398 846 aa14.72□□□□□ -0.05
PTPN1-202ENST00000541713 CCDC38Q502W7 563 aa14.72□□□□□ -0.05
PTPN1-202ENST00000541713 FAM102BQ5T8I3 360 aa14.72□□□□□ -0.05
PTPN1-202ENST00000541713 C15orf52Q6ZUT6 534 aaKnown RBP14.72□□□□□ -0.05
PTPN1-202ENST00000541713 PODNQ7Z5L7 613 aa14.72□□□□□ -0.05
PTPN1-202ENST00000541713 LNX1Q8TBB1 728 aaPredicted RBP14.72□□□□□ -0.05
PTPN1-202ENST00000541713 PI4K2AQ9BTU6 479 aa14.72□□□□□ -0.05
PTPN1-202ENST00000541713 TOPORSQ9NS56 1045 aaPredicted RBP14.72□□□□□ -0.05
PTPN1-202ENST00000541713 TYW1Q9NV66 732 aaKnown RBP14.72□□□□□ -0.05
PTPN1-202ENST00000541713 CCPG1Q9ULG6 757 aa14.72□□□□□ -0.05
PTPN1-202ENST00000541713 FAM169AQ9Y6X4 670 aa14.72□□□□□ -0.05
PTPN1-202ENST00000541713 EMSYQ7Z589 1322 aa14.72□□□□□ -0.05
PTPN1-202ENST00000541713 ADRA2BP18089 450 aa14.72□□□□□ -0.05
PTPN1-202ENST00000541713 PSMC2P35998 433 aaKnown RBP14.72□□□□□ -0.05
PTPN1-202ENST00000541713 UBAP2Q5T6F2 1119 aaKnown RBP14.72□□□□□ -0.05
PTPN1-202ENST00000541713 OGFOD1Q8N543 542 aa14.72□□□□□ -0.05
PTPN1-202ENST00000541713 TAB3Q8N5C8 712 aaPredicted RBP14.72□□□□□ -0.05
PTPN1-202ENST00000541713 TPCN2Q8NHX9 752 aa14.72□□□□□ -0.05
PTPN1-202ENST00000541713 MRRFQ96E11 262 aaKnown RBP14.72□□□□□ -0.05
PTPN1-202ENST00000541713 ZNF668Q96K58 619 aaPredicted RBP14.72□□□□□ -0.05
PTPN1-202ENST00000541713 NYAP2Q9P242 653 aa14.72□□□□□ -0.05
PTPN1-202ENST00000541713 MYH7BA7E2Y1 1941 aa14.72□□□□□ -0.05
PTPN1-202ENST00000541713 LAMB2P55268 1798 aa14.72□□□□□ -0.05
PTPN1-202ENST00000541713 IFT88Q13099 833 aa14.72□□□□□ -0.05
PTPN1-202ENST00000541713 MIER3Q7Z3K6 550 aa14.72□□□□□ -0.05
PTPN1-202ENST00000541713 DCAF4Q8WV16 495 aa14.72□□□□□ -0.05
PTPN1-202ENST00000541713 INPP4AQ96PE3 977 aaPredicted RBP14.72□□□□□ -0.05
PTPN1-202ENST00000541713 SELENOSQ9BQE4 189 aa14.72□□□□□ -0.05
PTPN1-202ENST00000541713 ZNF341Q9BYN7 854 aa14.72□□□□□ -0.05
PTPN1-202ENST00000541713 FMO5P49326 533 aa14.71□□□□□ -0.05
PTPN1-202ENST00000541713 MYL7Q01449 175 aa14.71□□□□□ -0.05
PTPN1-202ENST00000541713 OTOP1Q7RTM1 612 aa14.71□□□□□ -0.05
PTPN1-202ENST00000541713 LDHDQ86WU2 507 aa14.71□□□□□ -0.05
PTPN1-202ENST00000541713 RNF10Q8N5U6 811 aaKnown RBP14.71□□□□□ -0.05
PTPN1-202ENST00000541713 MGARPQ8TDB4 240 aa14.71□□□□□ -0.05
PTPN1-202ENST00000541713 DHX38Q92620 1227 aaKnown RBP14.71□□□□□ -0.05
PTPN1-202ENST00000541713 GGT7Q9UJ14 662 aa14.71□□□□□ -0.05
PTPN1-202ENST00000541713 AMFRQ9UKV5 643 aa14.71□□□□□ -0.05
PTPN1-202ENST00000541713 VAV3Q9UKW4 847 aa14.71□□□□□ -0.05
PTPN1-202ENST00000541713 YDJCA8MPS7 323 aa14.71□□□□□ -0.05
PTPN1-202ENST00000541713 PGRMC1O00264 195 aaKnown RBP14.71□□□□□ -0.05
PTPN1-202ENST00000541713 NR1D1P20393 614 aa14.71□□□□□ -0.05
PTPN1-202ENST00000541713 IFNAR2P48551 515 aa14.71□□□□□ -0.05
PTPN1-202ENST00000541713 MUM1L1Q5H9M0 696 aa14.71□□□□□ -0.05
PTPN1-202ENST00000541713 PACS2Q86VP3 889 aa14.71□□□□□ -0.05
PTPN1-202ENST00000541713 SREBF1P36956 1147 aa14.71□□□□□ -0.06
PTPN1-202ENST00000541713 AARSP49588 968 aaKnown RBP eCLIP14.71□□□□□ -0.06
PTPN1-202ENST00000541713 CC2D2BQ6DHV5 1058 aa14.71□□□□□ -0.06
PTPN1-202ENST00000541713 PHLDB3Q6NSJ2 640 aa14.71□□□□□ -0.06
PTPN1-202ENST00000541713 PADI6Q6TGC4 694 aa14.71□□□□□ -0.06
PTPN1-202ENST00000541713 KRT35Q92764 455 aa14.71□□□□□ -0.06
PTPN1-202ENST00000541713 INTS2Q9H0H0 1204 aaKnown RBP14.71□□□□□ -0.06
PTPN1-202ENST00000541713 ARHGEF10LQ9HCE6 1279 aa14.71□□□□□ -0.06
PTPN1-202ENST00000541713 PSD3Q9NYI0 1048 aa14.71□□□□□ -0.06
PTPN1-202ENST00000541713 PJA2O43164 708 aa14.7□□□□□ -0.06
PTPN1-202ENST00000541713 EYA4O95677 639 aa14.7□□□□□ -0.06
PTPN1-202ENST00000541713 KRT5P13647 590 aa14.7□□□□□ -0.06
PTPN1-202ENST00000541713 INPP5BP32019 993 aa14.7□□□□□ -0.06
PTPN1-202ENST00000541713 HSD17B3P37058 310 aa14.7□□□□□ -0.06
PTPN1-202ENST00000541713 MTM1Q13496 603 aa14.7□□□□□ -0.06
PTPN1-202ENST00000541713 CEP55Q53EZ4 464 aa14.7□□□□□ -0.06
PTPN1-202ENST00000541713 EMBQ6PCB8 327 aa14.7□□□□□ -0.06
PTPN1-202ENST00000541713 OTUD6AQ7L8S5 288 aa14.7□□□□□ -0.06
PTPN1-202ENST00000541713 ARHGEF19Q8IW93 802 aa14.7□□□□□ -0.06
PTPN1-202ENST00000541713 VIPAS39Q9H9C1 493 aa14.7□□□□□ -0.06
PTPN1-202ENST00000541713 ERVK-5Q9HDB9 667 aa14.7□□□□□ -0.06
PTPN1-202ENST00000541713 TELO2Q9Y4R8 837 aa14.7□□□□□ -0.06
PTPN1-202ENST00000541713 PDXKO00764 312 aa14.7□□□□□ -0.06
PTPN1-202ENST00000541713 FTLP02792 175 aaPredicted RBP14.7□□□□□ -0.06
PTPN1-202ENST00000541713 AGPAT3Q9NRZ7 376 aa14.7□□□□□ -0.06
PTPN1-202ENST00000541713 AIPL1Q9NZN9 384 aa14.7□□□□□ -0.06
PTPN1-202ENST00000541713 CYP26A1O43174 497 aa14.69□□□□□ -0.06
PTPN1-202ENST00000541713 SIX2Q9NPC8 291 aa14.69□□□□□ -0.06
PTPN1-202ENST00000541713 CYP3A4P08684 503 aa14.69□□□□□ -0.06
PTPN1-202ENST00000541713 HDLBPQ00341 1268 aaKnown RBP14.69□□□□□ -0.06
PTPN1-202ENST00000541713 AP3B2Q13367 1082 aa14.69□□□□□ -0.06
PTPN1-202ENST00000541713 HP1BP3Q5SSJ5 553 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms