RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 AOC2O75106 756 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 LGR5O75473 907 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 GH1P01241 217 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 RGS2P41220 211 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 FKBP3Q00688 224 aaKnown RBP9.56□□□□□ -0.88
THBS3-210ENST00000541576 ARHGAP1Q07960 439 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 KCNA1Q09470 495 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 ACVR2BQ13705 512 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 ARMCX5Q6P1M9 558 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 PPP4R3CPQ6ZMV5 832 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 LRRC55Q6ZSA7 311 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 MCPH1Q8NEM0 835 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 SOCS4Q8WXH5 440 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 CNOT6LQ96LI5 555 aaKnown RBP9.56□□□□□ -0.88
THBS3-210ENST00000541576 ATP6V0A4Q9HBG4 840 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 IMPACTQ9P2X3 320 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 PCDHB13Q9Y5F0 798 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 UBE4BO95155 1302 aa9.55□□□□□ -0.88
THBS3-210ENST00000541576 N4BP3O15049 544 aa9.55□□□□□ -0.88
THBS3-210ENST00000541576 PBX1P40424 430 aa9.55□□□□□ -0.88
THBS3-210ENST00000541576 ZC2HC1CQ53FD0 456 aaPredicted RBP9.55□□□□□ -0.88
THBS3-210ENST00000541576 GJC2Q5T442 439 aaPredicted RBP9.55□□□□□ -0.88
THBS3-210ENST00000541576 LRRC8AQ8IWT6 810 aa9.55□□□□□ -0.88
THBS3-210ENST00000541576 ZNF784Q8NCA9 323 aaPredicted RBP9.55□□□□□ -0.88
THBS3-210ENST00000541576 USP6NLQ92738 828 aa9.55□□□□□ -0.88
THBS3-210ENST00000541576 KIFAP3Q92845 792 aa9.55□□□□□ -0.88
THBS3-210ENST00000541576 FAM167AQ96KS9 214 aa9.55□□□□□ -0.88
THBS3-210ENST00000541576 NIFKQ9BYG3 293 aaKnown RBP9.55□□□□□ -0.88
THBS3-210ENST00000541576 IKZF4Q9H2S9 585 aa9.55□□□□□ -0.88
THBS3-210ENST00000541576 SPTLC3Q9NUV7 552 aa9.55□□□□□ -0.88
THBS3-210ENST00000541576 ARID2Q68CP9 1835 aa9.55□□□□□ -0.88
THBS3-210ENST00000541576 EMSYQ7Z589 1322 aa9.55□□□□□ -0.88
THBS3-210ENST00000541576 K7ENM7 598 aa9.55□□□□□ -0.88
THBS3-210ENST00000541576 PDXKO00764 312 aa9.55□□□□□ -0.88
THBS3-210ENST00000541576 MAPTP10636 758 aaKnown RBP9.55□□□□□ -0.88
THBS3-210ENST00000541576 CYP2B6P20813 491 aa9.55□□□□□ -0.88
THBS3-210ENST00000541576 APLP1P51693 650 aa9.55□□□□□ -0.88
THBS3-210ENST00000541576 GOLGA8FQ08AF8 430 aa9.55□□□□□ -0.88
THBS3-210ENST00000541576 GOLGA8DPQ0D2H9 430 aa9.55□□□□□ -0.88
THBS3-210ENST00000541576 EDRF1Q3B7T1 1238 aa9.55□□□□□ -0.88
THBS3-210ENST00000541576 CEP135Q66GS9 1140 aa9.55□□□□□ -0.88
THBS3-210ENST00000541576 PLPPR4Q7Z2D5 763 aa9.55□□□□□ -0.88
THBS3-210ENST00000541576 TRIM50Q86XT4 487 aa9.55□□□□□ -0.88
THBS3-210ENST00000541576 ANKRD7Q92527 254 aa9.55□□□□□ -0.88
THBS3-210ENST00000541576 TYW1Q9NV66 732 aaKnown RBP9.55□□□□□ -0.88
THBS3-210ENST00000541576 TRAF3IP3Q9Y228 551 aa9.55□□□□□ -0.88
THBS3-210ENST00000541576 CALUO43852 315 aaPredicted RBP9.54□□□□□ -0.88
THBS3-210ENST00000541576 YY1P25490 414 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 POLGP54098 1239 aaPredicted RBP9.54□□□□□ -0.88
THBS3-210ENST00000541576 PEX3P56589 373 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 TBX2Q13207 712 aaPredicted RBP9.54□□□□□ -0.88
THBS3-210ENST00000541576 ALCAMQ13740 583 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 DUSP28Q4G0W2 176 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 KSR1Q8IVT5 923 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 REM2Q8IYK8 340 aaPredicted RBP9.54□□□□□ -0.88
THBS3-210ENST00000541576 KRT222Q8N1A0 295 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 EMID1Q96A84 441 aaPredicted RBP9.54□□□□□ -0.88
THBS3-210ENST00000541576 APBA2Q99767 749 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 SMARCAD1Q9H4L7 1026 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 XPNPEP1Q9NQW7 623 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 PDLIM7Q9NR12 457 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 GJD2Q9UKL4 321 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.54□□□□□ -0.88
THBS3-210ENST00000541576 CCDC66A2RUB6 948 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 SMPD1P17405 629 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 MARK3P27448 753 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 MTIF2P46199 727 aaKnown RBP9.54□□□□□ -0.88
THBS3-210ENST00000541576 DMP1Q13316 513 aaPredicted RBP9.54□□□□□ -0.88
THBS3-210ENST00000541576 EMC2Q15006 297 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 SPECC1LQ69YQ0 1117 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 IQSEC1Q6DN90 963 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 SLC17A8Q8NDX2 589 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 NEK11Q8NG66 645 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 PPTC7Q8NI37 304 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 SLC7A3Q8WY07 619 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 CEP63Q96MT8 703 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 TUBGCP2Q9BSJ2 902 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 C17orf75Q9HAS0 396 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 FLRT1Q9NZU1 646 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 CETN3O15182 167 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 PPP1R37O75864 691 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 NR2F2P24468 414 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 CTGFP29279 349 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 SLC26A2P50443 739 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 SMTNP53814 917 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 FCGRTP55899 365 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 SOX10P56693 466 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 GSDMDP57764 484 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 ADAM9Q13443 819 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 IRF5Q13568 498 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 CCL14Q16627 93 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 OLFML2BQ68BL8 750 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 ATP8B4Q8TF62 1192 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 STRA6Q9BX79 667 aa9.54□□□□□ -0.88
THBS3-210ENST00000541576 DHX33Q9H6R0 707 aaKnown RBP9.54□□□□□ -0.88
THBS3-210ENST00000541576 PES1O00541 588 aaKnown RBP9.53□□□□□ -0.88
THBS3-210ENST00000541576 RFC5P40937 340 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 PSMC4P43686 418 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 RTP1P59025 263 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 TERF2Q15554 542 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms