RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 SH3BGRL2Q9UJC5 107 aa6.67□□□□□ -1.34
LMO3-225ENST00000541295 PNMA8BQ9ULN7 279 aaPredicted RBP6.67□□□□□ -1.34
LMO3-225ENST00000541295 COL14A1Q05707 1796 aaKnown RBP6.67□□□□□ -1.34
LMO3-225ENST00000541295 ADAMTS7Q9UKP4 1686 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 STX6O43752 255 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 PIP5K1CO60331 668 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 ZC3H11AO75152 810 aaKnown RBP eCLIP6.66□□□□□ -1.34
LMO3-225ENST00000541295 OR5F1O95221 314 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 STARD3NLO95772 234 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 FUT4P22083 530 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 SFPQP23246 707 aaKnown RBP eCLIP6.66□□□□□ -1.34
LMO3-225ENST00000541295 ACADSBP45954 432 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 TRAP1Q12931 704 aaKnown RBP6.66□□□□□ -1.34
LMO3-225ENST00000541295 CUL1Q13616 776 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 GNL2Q13823 731 aaKnown RBP6.66□□□□□ -1.34
LMO3-225ENST00000541295 GPR162Q16538 588 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 INSCQ1MX18 579 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 TJAP1Q5JTD0 557 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 KIF6Q6ZMV9 814 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 PTF1AQ7RTS3 328 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 AACSQ86V21 672 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 FAM186BQ8IYM0 893 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 C17orf53Q8N3J3 647 aaPredicted RBP6.66□□□□□ -1.34
LMO3-225ENST00000541295 SPATA5Q8NB90 893 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 GOT1L1Q8NHS2 421 aaPredicted RBP6.66□□□□□ -1.34
LMO3-225ENST00000541295 ARL5BQ96KC2 179 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 CNDP1Q96KN2 507 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 COQ7Q99807 217 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 GBP3Q9H0R5 595 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 GDPD2Q9HCC8 539 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 C12orf4Q9NQ89 552 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 CCDC177Q9NQR7 707 aaPredicted RBP6.66□□□□□ -1.34
LMO3-225ENST00000541295 VPS18Q9P253 973 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 PCDHB13Q9Y5F0 798 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 F8W810 466 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 APBB3O95704 486 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 SARSP49591 514 aaKnown RBP6.66□□□□□ -1.34
LMO3-225ENST00000541295 CTCFP49711 727 aaPredicted RBP6.66□□□□□ -1.34
LMO3-225ENST00000541295 RAC1P63000 192 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 CBLBQ13191 982 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 TRIM28Q13263 835 aaKnown RBP6.66□□□□□ -1.34
LMO3-225ENST00000541295 BZW1Q7L1Q6 419 aaKnown RBP6.66□□□□□ -1.34
LMO3-225ENST00000541295 NLRP10Q86W26 655 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 KIFAP3Q92845 792 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 ARL8AQ96BM9 186 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 GMLQ99445 158 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 UBE2OQ9C0C9 1292 aaKnown RBP6.66□□□□□ -1.34
LMO3-225ENST00000541295 CCDC8Q9H0W5 538 aaPredicted RBP6.66□□□□□ -1.34
LMO3-225ENST00000541295 STMN4Q9H169 189 aaPredicted RBP6.66□□□□□ -1.34
LMO3-225ENST00000541295 ZCCHC17Q9NP64 241 aaKnown RBP6.66□□□□□ -1.34
LMO3-225ENST00000541295 PPP1R14DQ9NXH3 145 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 DDX20Q9UHI6 824 aaKnown RBP6.66□□□□□ -1.34
LMO3-225ENST00000541295 DUSP12Q9UNI6 340 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 SPATA31A1Q5TZJ5 1347 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 COL16A1Q07092 1604 aaPredicted RBP6.66□□□□□ -1.34
LMO3-225ENST00000541295 BUB1BO60566 1050 aaPredicted RBP6.66□□□□□ -1.34
LMO3-225ENST00000541295 TGDSO95455 350 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 OLFM2O95897 454 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 GNAQP50148 359 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 POLE2P56282 527 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 KCNQ4P56696 695 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 C21orf58P58505 322 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 MAPRE2Q15555 327 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 NDUFA5Q16718 116 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 SHQ1Q6PI26 577 aaKnown RBP6.66□□□□□ -1.34
LMO3-225ENST00000541295 LVRNQ6Q4G3 990 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 ZER1Q7Z7L7 766 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 CRACR2BQ8N4Y2 399 aaPredicted RBP6.66□□□□□ -1.34
LMO3-225ENST00000541295 LPIN3Q9BQK8 851 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 PUS3Q9BZE2 481 aaKnown RBP6.66□□□□□ -1.34
LMO3-225ENST00000541295 VPS11Q9H270 941 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 ARFGAP3Q9NP61 516 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 ATP8A2Q9NTI2 1148 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 ZFATQ9P243 1243 aa6.66□□□□□ -1.34
LMO3-225ENST00000541295 SNTNA6NMZ2 147 aa6.65□□□□□ -1.34
LMO3-225ENST00000541295 TNFRSF10AO00220 468 aa6.65□□□□□ -1.34
LMO3-225ENST00000541295 PDHA1P08559 390 aa6.65□□□□□ -1.34
LMO3-225ENST00000541295 EEF2P13639 858 aaKnown RBP6.65□□□□□ -1.34
LMO3-225ENST00000541295 MTMR3Q13615 1198 aa6.65□□□□□ -1.34
LMO3-225ENST00000541295 LMBR1LQ6UX01 489 aa6.65□□□□□ -1.34
LMO3-225ENST00000541295 ATG9AQ7Z3C6 839 aa6.65□□□□□ -1.34
LMO3-225ENST00000541295 LRP10Q7Z4F1 713 aa6.65□□□□□ -1.34
LMO3-225ENST00000541295 UNC5CLQ8IV45 518 aa6.65□□□□□ -1.34
LMO3-225ENST00000541295 SYTL1Q8IYJ3 562 aa6.65□□□□□ -1.34
LMO3-225ENST00000541295 ST13P4Q8IZP2 240 aaPredicted RBP6.65□□□□□ -1.34
LMO3-225ENST00000541295 OR52K2Q8NGK3 314 aa6.65□□□□□ -1.34
LMO3-225ENST00000541295 CAGE1Q8TC20 777 aa6.65□□□□□ -1.34
LMO3-225ENST00000541295 DQX1Q8TE96 717 aaKnown RBP6.65□□□□□ -1.34
LMO3-225ENST00000541295 FAM149B1Q96BN6 582 aa6.65□□□□□ -1.34
LMO3-225ENST00000541295 EFHD2Q96C19 240 aaPredicted RBP6.65□□□□□ -1.34
LMO3-225ENST00000541295 KAZALD1Q96I82 304 aa6.65□□□□□ -1.34
LMO3-225ENST00000541295 ATP6V1G3Q96LB4 118 aa6.65□□□□□ -1.34
LMO3-225ENST00000541295 ZCWPW1Q9H0M4 648 aa6.65□□□□□ -1.34
LMO3-225ENST00000541295 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.65□□□□□ -1.34
LMO3-225ENST00000541295 MCF2LO15068 1137 aa6.65□□□□□ -1.35
LMO3-225ENST00000541295 IDH3BO43837 385 aa6.65□□□□□ -1.35
LMO3-225ENST00000541295 HSPA6P17066 643 aa6.65□□□□□ -1.35
LMO3-225ENST00000541295 DNAJB1P25685 340 aa6.65□□□□□ -1.35
LMO3-225ENST00000541295 THOP1P52888 689 aa6.65□□□□□ -1.35
LMO3-225ENST00000541295 TBL3Q12788 808 aaKnown RBP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms