RNA–Protein interactions for RNA: ENST00000540999.5

TCF4-207, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-207ENST00000540999 EFR3BQ9Y2G0 817 aa9.6□□□□□ -0.87
TCF4-207ENST00000540999 BRCA1P38398 1863 aaKnown RBP9.59□□□□□ -0.87
TCF4-207ENST00000540999 DDTLA6NHG4 134 aaPredicted RBP9.59□□□□□ -0.87
TCF4-207ENST00000540999 ANKRD65E5RJM6 399 aa9.59□□□□□ -0.87
TCF4-207ENST00000540999 MYL3P08590 195 aa9.59□□□□□ -0.87
TCF4-207ENST00000540999 GUCY2FP51841 1108 aa9.59□□□□□ -0.87
TCF4-207ENST00000540999 TGFB2P61812 414 aa9.59□□□□□ -0.87
TCF4-207ENST00000540999 CBLBQ13191 982 aa9.59□□□□□ -0.87
TCF4-207ENST00000540999 CFAP100Q494V2 611 aa9.59□□□□□ -0.87
TCF4-207ENST00000540999 ANKRD39Q53RE8 183 aa9.59□□□□□ -0.87
TCF4-207ENST00000540999 SH3BP5LQ7L8J4 393 aa9.59□□□□□ -0.87
TCF4-207ENST00000540999 FCHSD1Q86WN1 690 aa9.59□□□□□ -0.87
TCF4-207ENST00000540999 C17orf53Q8N3J3 647 aaPredicted RBP9.59□□□□□ -0.87
TCF4-207ENST00000540999 SRBD1Q8N5C6 995 aaKnown RBP9.59□□□□□ -0.87
TCF4-207ENST00000540999 RNF10Q8N5U6 811 aaKnown RBP9.59□□□□□ -0.87
TCF4-207ENST00000540999 AADATQ8N5Z0 425 aa9.59□□□□□ -0.87
TCF4-207ENST00000540999 GDAP1Q8TB36 358 aa9.59□□□□□ -0.87
TCF4-207ENST00000540999 RBM18Q96H35 190 aaKnown RBP9.59□□□□□ -0.87
TCF4-207ENST00000540999 APBA2Q99767 749 aa9.59□□□□□ -0.87
TCF4-207ENST00000540999 TTPALQ9BTX7 342 aa9.59□□□□□ -0.87
TCF4-207ENST00000540999 GLT8D2Q9H1C3 349 aa9.59□□□□□ -0.87
TCF4-207ENST00000540999 CLSTN2Q9H4D0 955 aa9.59□□□□□ -0.87
TCF4-207ENST00000540999 V9GY48 417 aaPredicted RBP9.59□□□□□ -0.87
TCF4-207ENST00000540999 NID2Q14112 1375 aa9.59□□□□□ -0.87
TCF4-207ENST00000540999 GOLGA8HP0CJ92 632 aa9.59□□□□□ -0.87
TCF4-207ENST00000540999 CES1P23141 567 aa9.59□□□□□ -0.87
TCF4-207ENST00000540999 HSD17B2P37059 387 aa9.59□□□□□ -0.87
TCF4-207ENST00000540999 KIF23Q02241 960 aaPredicted RBP9.59□□□□□ -0.87
TCF4-207ENST00000540999 CEP68Q76N32 757 aa9.59□□□□□ -0.87
TCF4-207ENST00000540999 FAM9CQ8IZT9 166 aa9.59□□□□□ -0.87
TCF4-207ENST00000540999 KIRREL3Q8IZU9 778 aa9.59□□□□□ -0.87
TCF4-207ENST00000540999 MGARPQ8TDB4 240 aa9.59□□□□□ -0.87
TCF4-207ENST00000540999 PGBD1Q96JS3 809 aa9.59□□□□□ -0.87
TCF4-207ENST00000540999 GALNT8Q9NY28 637 aa9.59□□□□□ -0.87
TCF4-207ENST00000540999 MYH8P13535 1937 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 A0A1B0GVG6 124 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 CLRN2A0PK11 232 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 SYCE3A1L190 88 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 NFKBIEO00221 500 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 AKR1B1P15121 316 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 ANXA13P27216 316 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 ETV3P41162 512 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 PRELPP51888 382 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 UBE2HP62256 183 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 GABPAQ06546 454 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 NEK5Q6P3R8 708 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 PNMA1Q8ND90 353 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 TRIM58Q8NG06 486 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 DEPTORQ8TB45 409 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 CACTINQ8WUQ7 758 aaKnown RBP9.58□□□□□ -0.88
TCF4-207ENST00000540999 TMEM47Q9BQJ4 181 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 YIPF3Q9GZM5 350 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 DNAJC18Q9H819 358 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 MYPNQ86TC9 1320 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 RTCAO00442 366 aaKnown RBP9.58□□□□□ -0.88
TCF4-207ENST00000540999 B4GALT4O60513 344 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 CASP2P42575 452 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 MAP3K9P80192 1104 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 TUBA3CQ13748 450 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 DPYSQ14117 519 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 SLC35G1Q2M3R5 365 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 PCNX4Q63HM2 1172 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 NUGGCQ68CJ6 796 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 NXNQ6DKJ4 435 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 MIS18BP1Q6P0N0 1132 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 RSBN1LQ6PCB5 846 aaPredicted RBP9.58□□□□□ -0.88
TCF4-207ENST00000540999 GALNT15Q8N3T1 639 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 OXER1Q8TDS5 423 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 PPP2R3CQ969Q6 453 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 HERC2P3Q9BVR0 1158 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 KAT14Q9H8E8 782 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 VPS54Q9P1Q0 977 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 SERPINB13Q9UIV8 391 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 MTUS1Q9ULD2 1270 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 CLIC4Q9Y696 253 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 SIPA1L1O43166 1804 aa9.58□□□□□ -0.88
TCF4-207ENST00000540999 PSME4Q14997 1843 aa9.57□□□□□ -0.88
TCF4-207ENST00000540999 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.57□□□□□ -0.88
TCF4-207ENST00000540999 GOLGA6L7A0A1B0GV03 622 aa9.57□□□□□ -0.88
TCF4-207ENST00000540999 POTEFA5A3E0 1075 aa9.57□□□□□ -0.88
TCF4-207ENST00000540999 BTBD18B2RXH4 712 aa9.57□□□□□ -0.88
TCF4-207ENST00000540999 ADAMTS3O15072 1205 aa9.57□□□□□ -0.88
TCF4-207ENST00000540999 NFKBIAP25963 317 aa9.57□□□□□ -0.88
TCF4-207ENST00000540999 SHMT1P34896 483 aa9.57□□□□□ -0.88
TCF4-207ENST00000540999 MLH1P40692 756 aa9.57□□□□□ -0.88
TCF4-207ENST00000540999 FKBP1AP62942 108 aaKnown RBP9.57□□□□□ -0.88
TCF4-207ENST00000540999 DR1Q01658 176 aa9.57□□□□□ -0.88
TCF4-207ENST00000540999 ATP2B2Q01814 1243 aa9.57□□□□□ -0.88
TCF4-207ENST00000540999 CXCL9Q07325 125 aa9.57□□□□□ -0.88
TCF4-207ENST00000540999 SAFBQ15424 915 aaKnown RBP eCLIP9.57□□□□□ -0.88
TCF4-207ENST00000540999 FOXR1Q6PIV2 292 aa9.57□□□□□ -0.88
TCF4-207ENST00000540999 CAPN12Q6ZSI9 719 aa9.57□□□□□ -0.88
TCF4-207ENST00000540999 TMTC3Q6ZXV5 915 aa9.57□□□□□ -0.88
TCF4-207ENST00000540999 ZSCAN29Q8IWY8 852 aaPredicted RBP9.57□□□□□ -0.88
TCF4-207ENST00000540999 CDAN1Q8IWY9 1227 aa9.57□□□□□ -0.88
TCF4-207ENST00000540999 TRIM22Q8IYM9 498 aa9.57□□□□□ -0.88
TCF4-207ENST00000540999 SYT2Q8N9I0 419 aaPredicted RBP9.57□□□□□ -0.88
TCF4-207ENST00000540999 CCDC112Q8NEF3 446 aa9.57□□□□□ -0.88
TCF4-207ENST00000540999 GIMAP5Q96F15 307 aa9.57□□□□□ -0.88
TCF4-207ENST00000540999 UBXN6Q9BZV1 441 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms