RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 DBR1Q9UK59 544 aaKnown RBP13.78□□□□□ -0.2
SMAD3-204ENST00000540846 MYH11P35749 1972 aa13.78□□□□□ -0.2
SMAD3-204ENST00000540846 BACH1O14867 736 aa13.77□□□□□ -0.21
SMAD3-204ENST00000540846 ZNF286BP0CG31 522 aa13.77□□□□□ -0.21
SMAD3-204ENST00000540846 CNGA1P29973 690 aa13.77□□□□□ -0.21
SMAD3-204ENST00000540846 YWHABP31946 246 aaKnown RBP13.77□□□□□ -0.21
SMAD3-204ENST00000540846 RARRES1P49788 294 aa13.77□□□□□ -0.21
SMAD3-204ENST00000540846 STAT5BP51692 787 aa13.77□□□□□ -0.21
SMAD3-204ENST00000540846 LHX8Q68G74 356 aa13.77□□□□□ -0.21
SMAD3-204ENST00000540846 CNOT6LQ96LI5 555 aaKnown RBP13.77□□□□□ -0.21
SMAD3-204ENST00000540846 RUSC1Q9BVN2 902 aa13.77□□□□□ -0.21
SMAD3-204ENST00000540846 DDX20Q9UHI6 824 aaKnown RBP13.77□□□□□ -0.21
SMAD3-204ENST00000540846 ZBTB42B2RXF5 422 aa13.76□□□□□ -0.21
SMAD3-204ENST00000540846 KIF20AO95235 890 aa13.76□□□□□ -0.21
SMAD3-204ENST00000540846 FGFR1OPO95684 399 aaKnown RBP13.76□□□□□ -0.21
SMAD3-204ENST00000540846 PGK1P00558 417 aa13.76□□□□□ -0.21
SMAD3-204ENST00000540846 F2P00734 622 aa13.76□□□□□ -0.21
SMAD3-204ENST00000540846 OATP04181 439 aa13.76□□□□□ -0.21
SMAD3-204ENST00000540846 RARBP10826 455 aa13.76□□□□□ -0.21
SMAD3-204ENST00000540846 CST5P28325 142 aaPredicted RBP13.76□□□□□ -0.21
SMAD3-204ENST00000540846 BEX3Q00994 111 aa13.76□□□□□ -0.21
SMAD3-204ENST00000540846 TARBP2Q15633 366 aaKnown RBP13.76□□□□□ -0.21
SMAD3-204ENST00000540846 FSCN1Q16658 493 aaKnown RBP13.76□□□□□ -0.21
SMAD3-204ENST00000540846 DGKDQ16760 1214 aa13.76□□□□□ -0.21
SMAD3-204ENST00000540846 XKR3Q5GH77 459 aa13.76□□□□□ -0.21
SMAD3-204ENST00000540846 HERC4Q5GLZ8 1057 aaPredicted RBP13.76□□□□□ -0.21
SMAD3-204ENST00000540846 UTP14CQ5TAP6 766 aaKnown RBP13.76□□□□□ -0.21
SMAD3-204ENST00000540846 FAM160B1Q5W0V3 765 aa13.76□□□□□ -0.21
SMAD3-204ENST00000540846 PLA2G4FQ68DD2 849 aa13.76□□□□□ -0.21
SMAD3-204ENST00000540846 CCSAPQ6IQ19 270 aaPredicted RBP13.76□□□□□ -0.21
SMAD3-204ENST00000540846 LRRC55Q6ZSA7 311 aa13.76□□□□□ -0.21
SMAD3-204ENST00000540846 TC2NQ8N9U0 490 aa13.76□□□□□ -0.21
SMAD3-204ENST00000540846 KLHDC9Q8NEP7 349 aa13.76□□□□□ -0.21
SMAD3-204ENST00000540846 KAT2BQ92831 832 aa13.76□□□□□ -0.21
SMAD3-204ENST00000540846 FGFBP2Q9BYJ0 223 aa13.76□□□□□ -0.21
SMAD3-204ENST00000540846 VPS16Q9H269 839 aa13.76□□□□□ -0.21
SMAD3-204ENST00000540846 ANKEF1Q9NU02 776 aa13.76□□□□□ -0.21
SMAD3-204ENST00000540846 KCND2Q9NZV8 630 aa13.76□□□□□ -0.21
SMAD3-204ENST00000540846 DNAH12Q6ZR08 3092 aa13.76□□□□□ -0.21
SMAD3-204ENST00000540846 A0A1W2PQC6 194 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 DKC1O60832 514 aaKnown RBP eCLIP13.75□□□□□ -0.21
SMAD3-204ENST00000540846 GAP43P17677 238 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 CPT1AP50416 773 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 SLC26A2P50443 739 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 NPEPPSP55786 919 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 CACNB1Q02641 598 aaPredicted RBP13.75□□□□□ -0.21
SMAD3-204ENST00000540846 RAD51AP2Q09MP3 1159 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 TRIM14Q14142 442 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 PLCB4Q15147 1175 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 LRRC41Q15345 812 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 RINT1Q6NUQ1 792 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 FBXO46Q6PJ61 603 aaPredicted RBP13.75□□□□□ -0.21
SMAD3-204ENST00000540846 C1orf186Q6ZWK4 172 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 TMEM139Q8IV31 216 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 ZNF507Q8TCN5 953 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 ATP8B4Q8TF62 1192 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 SCFD1Q8WVM8 642 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 TSG101Q99816 390 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 SH2D3AQ9BRG2 576 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 NIFKQ9BYG3 293 aaKnown RBP13.75□□□□□ -0.21
SMAD3-204ENST00000540846 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.75□□□□□ -0.21
SMAD3-204ENST00000540846 AP5M1Q9H0R1 490 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 UNC93B1Q9H1C4 597 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 RNPEPQ9H4A4 650 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 SMARCAD1Q9H4L7 1026 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 HMX1Q9NP08 348 aaPredicted RBP13.75□□□□□ -0.21
SMAD3-204ENST00000540846 XPNPEP3Q9NQH7 507 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 PAK6Q9NQU5 681 aaPredicted RBP13.75□□□□□ -0.21
SMAD3-204ENST00000540846 KAT6AQ92794 2004 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 HAS3O00219 553 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 TBCAO75347 108 aaKnown RBP13.75□□□□□ -0.21
SMAD3-204ENST00000540846 PURAQ00577 322 aaKnown RBP13.75□□□□□ -0.21
SMAD3-204ENST00000540846 MTFR1Q15390 333 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 BMT2Q1RMZ1 405 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 SLC9C1Q4G0N8 1177 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 EPM2AIP1Q7L775 607 aaPredicted RBP13.75□□□□□ -0.21
SMAD3-204ENST00000540846 SFR1Q86XK3 245 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 ZC3H3Q8IXZ2 948 aaKnown RBP13.75□□□□□ -0.21
SMAD3-204ENST00000540846 GLG1Q92896 1179 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 PANX2Q96RD6 677 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 TUBGCP2Q9BSJ2 902 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 AZI2Q9H6S1 392 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 PDLIM7Q9NR12 457 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 OLFML3Q9NRN5 406 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 ERAP1Q9NZ08 941 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.75□□□□□ -0.21
SMAD3-204ENST00000540846 COL4A3BPQ9Y5P4 624 aa13.75□□□□□ -0.21
SMAD3-204ENST00000540846 TRIP12Q14669 1992 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-204ENST00000540846 EVPLQ92817 2033 aa13.74□□□□□ -0.21
SMAD3-204ENST00000540846 AKR1B15C9JRZ8 316 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-204ENST00000540846 H3BRB1 525 aa13.74□□□□□ -0.21
SMAD3-204ENST00000540846 MSCO60682 206 aa13.74□□□□□ -0.21
SMAD3-204ENST00000540846 GYPCP04921 128 aa13.74□□□□□ -0.21
SMAD3-204ENST00000540846 TPM2P07951 284 aa13.74□□□□□ -0.21
SMAD3-204ENST00000540846 C6orf222P0C671 652 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-204ENST00000540846 MARK3P27448 753 aa13.74□□□□□ -0.21
SMAD3-204ENST00000540846 DNM2P50570 870 aa13.74□□□□□ -0.21
SMAD3-204ENST00000540846 UBXN1Q04323 297 aa13.74□□□□□ -0.21
SMAD3-204ENST00000540846 GOLGA8FQ08AF8 430 aa13.74□□□□□ -0.21
SMAD3-204ENST00000540846 GOLGA8DPQ0D2H9 430 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms