RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 RAB27AP51159 221 aa11.64□□□□□ -0.55
CDCA3-208ENST00000540683 NUBP1P53384 320 aa11.64□□□□□ -0.55
CDCA3-208ENST00000540683 GNL2Q13823 731 aaKnown RBP11.64□□□□□ -0.55
CDCA3-208ENST00000540683 EPHA7Q15375 998 aa11.64□□□□□ -0.55
CDCA3-208ENST00000540683 TRMT1LQ7Z2T5 733 aaKnown RBP11.64□□□□□ -0.55
CDCA3-208ENST00000540683 C4orf19Q8IY42 314 aa11.64□□□□□ -0.55
CDCA3-208ENST00000540683 OSMRQ99650 979 aa11.64□□□□□ -0.55
CDCA3-208ENST00000540683 LARP6Q9BRS8 491 aaKnown RBP11.64□□□□□ -0.55
CDCA3-208ENST00000540683 MRPL9Q9BYD2 267 aaKnown RBP11.64□□□□□ -0.55
CDCA3-208ENST00000540683 ZSWIM4Q9H7M6 989 aa11.64□□□□□ -0.55
CDCA3-208ENST00000540683 RC3H2Q9HBD1 1191 aaKnown RBP11.64□□□□□ -0.55
CDCA3-208ENST00000540683 PCDHA12Q9UN75 941 aa11.64□□□□□ -0.55
CDCA3-208ENST00000540683 NOC2LQ9Y3T9 749 aaKnown RBP11.64□□□□□ -0.55
CDCA3-208ENST00000540683 STK24Q9Y6E0 443 aa11.64□□□□□ -0.55
CDCA3-208ENST00000540683 WDR81Q562E7 1941 aa11.64□□□□□ -0.55
CDCA3-208ENST00000540683 TTC28Q96AY4 2481 aa11.64□□□□□ -0.55
CDCA3-208ENST00000540683 LOXHD1Q8IVV2 1947 aa11.63□□□□□ -0.55
CDCA3-208ENST00000540683 ST18O60284 1047 aa11.63□□□□□ -0.55
CDCA3-208ENST00000540683 NEMFO60524 1076 aa11.63□□□□□ -0.55
CDCA3-208ENST00000540683 MAFO75444 373 aaPredicted RBP11.63□□□□□ -0.55
CDCA3-208ENST00000540683 ARHGEF15O94989 841 aa11.63□□□□□ -0.55
CDCA3-208ENST00000540683 BMP1P13497 986 aa11.63□□□□□ -0.55
CDCA3-208ENST00000540683 GPC3P51654 580 aa11.63□□□□□ -0.55
CDCA3-208ENST00000540683 CLCN3P51790 818 aa11.63□□□□□ -0.55
CDCA3-208ENST00000540683 POLGP54098 1239 aaPredicted RBP11.63□□□□□ -0.55
CDCA3-208ENST00000540683 KRT17Q04695 432 aa11.63□□□□□ -0.55
CDCA3-208ENST00000540683 TARBP2Q15633 366 aaKnown RBP11.63□□□□□ -0.55
CDCA3-208ENST00000540683 ME3Q16798 604 aa11.63□□□□□ -0.55
CDCA3-208ENST00000540683 LEXMQ3ZCV2 418 aa11.63□□□□□ -0.55
CDCA3-208ENST00000540683 MTERF2Q49AM1 385 aa11.63□□□□□ -0.55
CDCA3-208ENST00000540683 B3GNT9Q6UX72 402 aa11.63□□□□□ -0.55
CDCA3-208ENST00000540683 LRRC43Q8N309 656 aa11.63□□□□□ -0.55
CDCA3-208ENST00000540683 FAM184AQ8NB25 1140 aa11.63□□□□□ -0.55
CDCA3-208ENST00000540683 PSPC1Q8WXF1 523 aaKnown RBP11.63□□□□□ -0.55
CDCA3-208ENST00000540683 PABPC5Q96DU9 382 aaKnown RBP11.63□□□□□ -0.55
CDCA3-208ENST00000540683 C1QTNF1Q9BXJ1 281 aa11.63□□□□□ -0.55
CDCA3-208ENST00000540683 TMEM117Q9H0C3 514 aa11.63□□□□□ -0.55
CDCA3-208ENST00000540683 UBE2ZQ9H832 354 aaPredicted RBP11.63□□□□□ -0.55
CDCA3-208ENST00000540683 CYP26B1Q9NR63 512 aa11.63□□□□□ -0.55
CDCA3-208ENST00000540683 C9IYK1 514 aa11.62□□□□□ -0.55
CDCA3-208ENST00000540683 ZNF862O60290 1169 aa11.62□□□□□ -0.55
CDCA3-208ENST00000540683 XRCC6P12956 609 aaKnown RBP eCLIP11.62□□□□□ -0.55
CDCA3-208ENST00000540683 DARSP14868 501 aaKnown RBP11.62□□□□□ -0.55
CDCA3-208ENST00000540683 RBM25P49756 843 aaKnown RBP11.62□□□□□ -0.55
CDCA3-208ENST00000540683 FAM189BP81408 668 aa11.62□□□□□ -0.55
CDCA3-208ENST00000540683 TFDP1Q14186 410 aa11.62□□□□□ -0.55
CDCA3-208ENST00000540683 MXD4Q14582 209 aaPredicted RBP11.62□□□□□ -0.55
CDCA3-208ENST00000540683 NPY5RQ15761 445 aa11.62□□□□□ -0.55
CDCA3-208ENST00000540683 CALCRLQ16602 461 aa11.62□□□□□ -0.55
CDCA3-208ENST00000540683 TMEM266Q2M3C6 531 aa11.62□□□□□ -0.55
CDCA3-208ENST00000540683 CRIPAKQ8N1N5 446 aa11.62□□□□□ -0.55
CDCA3-208ENST00000540683 LINC01465Q8N7H1 131 aa11.62□□□□□ -0.55
CDCA3-208ENST00000540683 NSUN7Q8NE18 718 aaKnown RBP11.62□□□□□ -0.55
CDCA3-208ENST00000540683 ERMNQ8TAM6 284 aa11.62□□□□□ -0.55
CDCA3-208ENST00000540683 PGBD4Q96DM1 585 aa11.62□□□□□ -0.55
CDCA3-208ENST00000540683 CEP170P1Q96L14 293 aa11.62□□□□□ -0.55
CDCA3-208ENST00000540683 AIFM3Q96NN9 605 aa11.62□□□□□ -0.55
CDCA3-208ENST00000540683 UIMC1Q96RL1 719 aa11.62□□□□□ -0.55
CDCA3-208ENST00000540683 POP1Q99575 1024 aaKnown RBP11.62□□□□□ -0.55
CDCA3-208ENST00000540683 CDCA3Q99618 268 aaPredicted RBP11.62□□□□□ -0.55
CDCA3-208ENST00000540683 TRAIPQ9BWF2 469 aa11.62□□□□□ -0.55
CDCA3-208ENST00000540683 RAB34Q9BZG1 259 aa11.62□□□□□ -0.55
CDCA3-208ENST00000540683 ADAMTS10Q9H324 1103 aa11.62□□□□□ -0.55
CDCA3-208ENST00000540683 TMX1Q9H3N1 280 aa11.62□□□□□ -0.55
CDCA3-208ENST00000540683 SUCLA2Q9P2R7 463 aaPredicted RBP11.62□□□□□ -0.55
CDCA3-208ENST00000540683 NOL7Q9UMY1 257 aaKnown RBP11.62□□□□□ -0.55
CDCA3-208ENST00000540683 LZTS1Q9Y250 596 aa11.62□□□□□ -0.55
CDCA3-208ENST00000540683 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.61□□□□□ -0.55
CDCA3-208ENST00000540683 IGKV6-21A0A0C4DH24 114 aa11.61□□□□□ -0.55
CDCA3-208ENST00000540683 A0A0U1RQF3 1178 aa11.61□□□□□ -0.55
CDCA3-208ENST00000540683 TBKBP1A7MCY6 615 aa11.61□□□□□ -0.55
CDCA3-208ENST00000540683 SLC37A4O43826 429 aa11.61□□□□□ -0.55
CDCA3-208ENST00000540683 YWHABP31946 246 aaKnown RBP11.61□□□□□ -0.55
CDCA3-208ENST00000540683 TRAPPC10P48553 1259 aa11.61□□□□□ -0.55
CDCA3-208ENST00000540683 MCM2P49736 904 aa11.61□□□□□ -0.55
CDCA3-208ENST00000540683 NCAPH2Q6IBW4 605 aa11.61□□□□□ -0.55
CDCA3-208ENST00000540683 SRGAP1Q7Z6B7 1085 aa11.61□□□□□ -0.55
CDCA3-208ENST00000540683 RTN4RL1Q86UN2 441 aaPredicted RBP11.61□□□□□ -0.55
CDCA3-208ENST00000540683 FAM228AQ86W67 206 aa11.61□□□□□ -0.55
CDCA3-208ENST00000540683 DIS3L2Q8IYB7 885 aaKnown RBP11.61□□□□□ -0.55
CDCA3-208ENST00000540683 THNSL1Q8IYQ7 743 aa11.61□□□□□ -0.55
CDCA3-208ENST00000540683 HACE1Q8IYU2 909 aa11.61□□□□□ -0.55
CDCA3-208ENST00000540683 LRRC71Q8N4P6 559 aa11.61□□□□□ -0.55
CDCA3-208ENST00000540683 CNNM3Q8NE01 707 aa11.61□□□□□ -0.55
CDCA3-208ENST00000540683 LINC01599Q8WXQ3 324 aa11.61□□□□□ -0.55
CDCA3-208ENST00000540683 C8orf76Q96K31 380 aa11.61□□□□□ -0.55
CDCA3-208ENST00000540683 LXNQ9BS40 222 aa11.61□□□□□ -0.55
CDCA3-208ENST00000540683 OSBPL7Q9BZF2 842 aa11.61□□□□□ -0.55
CDCA3-208ENST00000540683 FOXP1Q9H334 677 aaPredicted RBP11.61□□□□□ -0.55
CDCA3-208ENST00000540683 PRDM6Q9NQX0 595 aa11.61□□□□□ -0.55
CDCA3-208ENST00000540683 PRKAG3Q9UGI9 489 aa11.61□□□□□ -0.55
CDCA3-208ENST00000540683 VAV3Q9UKW4 847 aa11.61□□□□□ -0.55
CDCA3-208ENST00000540683 PLAGL2Q9UPG8 496 aa11.61□□□□□ -0.55
CDCA3-208ENST00000540683 MRPL42Q9Y6G3 142 aaKnown RBP11.61□□□□□ -0.55
CDCA3-208ENST00000540683 ADAMTS3O15072 1205 aa11.6□□□□□ -0.55
CDCA3-208ENST00000540683 DGAT1O75907 488 aa11.6□□□□□ -0.55
CDCA3-208ENST00000540683 LYPLA2O95372 231 aa11.6□□□□□ -0.55
CDCA3-208ENST00000540683 CTDNEP1O95476 244 aa11.6□□□□□ -0.55
CDCA3-208ENST00000540683 MUTP22033 750 aa11.6□□□□□ -0.55
CDCA3-208ENST00000540683 KCNA5P22460 613 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms