RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 PPP1R37O75864 691 aa10.57□□□□□ -0.72
CLIP1-212ENST00000540304 RGS20O76081 388 aa10.57□□□□□ -0.72
CLIP1-212ENST00000540304 IPO7O95373 1038 aaKnown RBP10.57□□□□□ -0.72
CLIP1-212ENST00000540304 ABL1P00519 1130 aa10.57□□□□□ -0.72
CLIP1-212ENST00000540304 MAPTP10636 758 aaKnown RBP10.57□□□□□ -0.72
CLIP1-212ENST00000540304 XRCC5P13010 732 aaKnown RBP10.57□□□□□ -0.72
CLIP1-212ENST00000540304 KCNA2P16389 499 aa10.57□□□□□ -0.72
CLIP1-212ENST00000540304 ARHGAP25P42331 645 aa10.57□□□□□ -0.72
CLIP1-212ENST00000540304 GNPTABQ3T906 1256 aa10.57□□□□□ -0.72
CLIP1-212ENST00000540304 HS2ST1Q7LGA3 356 aa10.57□□□□□ -0.72
CLIP1-212ENST00000540304 TRMT1LQ7Z2T5 733 aaKnown RBP10.57□□□□□ -0.72
CLIP1-212ENST00000540304 DNERQ8NFT8 737 aa10.57□□□□□ -0.72
CLIP1-212ENST00000540304 BAP1Q92560 729 aa10.57□□□□□ -0.72
CLIP1-212ENST00000540304 OTUD5Q96G74 571 aa10.57□□□□□ -0.72
CLIP1-212ENST00000540304 IWS1Q96ST2 819 aa10.57□□□□□ -0.72
CLIP1-212ENST00000540304 EIF3CQ99613 913 aaKnown RBP10.57□□□□□ -0.72
CLIP1-212ENST00000540304 LSM14BQ9BX40 385 aaKnown RBP10.57□□□□□ -0.72
CLIP1-212ENST00000540304 STRA6Q9BX79 667 aa10.57□□□□□ -0.72
CLIP1-212ENST00000540304 ANKEF1Q9NU02 776 aa10.57□□□□□ -0.72
CLIP1-212ENST00000540304 MYO1AQ9UBC5 1043 aa10.57□□□□□ -0.72
CLIP1-212ENST00000540304 FBXO40Q9UH90 709 aa10.57□□□□□ -0.72
CLIP1-212ENST00000540304 DDX41Q9UJV9 622 aaKnown RBP10.57□□□□□ -0.72
CLIP1-212ENST00000540304 TFR2Q9UP52 801 aa10.57□□□□□ -0.72
CLIP1-212ENST00000540304 DOCK5Q9H7D0 1870 aa10.57□□□□□ -0.72
CLIP1-212ENST00000540304 SPDYE5A6NIY4 337 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 LRRC53A6NM62 1247 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 USO1O60763 962 aaKnown RBP10.56□□□□□ -0.72
CLIP1-212ENST00000540304 AFPP02771 609 aaKnown RBP10.56□□□□□ -0.72
CLIP1-212ENST00000540304 EPHX2P34913 555 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 GSCP56915 257 aaPredicted RBP10.56□□□□□ -0.72
CLIP1-212ENST00000540304 ALCAMQ13740 583 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 PDXDC1Q6P996 788 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 RRAGAQ7L523 313 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 RIOX2Q8IUF8 465 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 GOLGA5Q8TBA6 731 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 GBP3Q9H0R5 595 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 NUCKS1Q9H1E3 243 aaKnown RBP10.56□□□□□ -0.72
CLIP1-212ENST00000540304 IKZF4Q9H2S9 585 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 ARID2Q68CP9 1835 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 K7ENM7 598 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 CXCL11O14625 94 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 BACH1O14867 736 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 DKC1O60832 514 aaKnown RBP eCLIP10.56□□□□□ -0.72
CLIP1-212ENST00000540304 CAND2O75155 1236 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 PLS3P13797 630 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 PAX7P23759 505 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 PSMC2P35998 433 aaKnown RBP10.56□□□□□ -0.72
CLIP1-212ENST00000540304 CASP4P49662 377 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 HERVK_113P62684 666 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 NCBP1Q09161 790 aaKnown RBP10.56□□□□□ -0.72
CLIP1-212ENST00000540304 TTLL12Q14166 644 aaPredicted RBP10.56□□□□□ -0.72
CLIP1-212ENST00000540304 ZNF569Q5MCW4 686 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 ZNF662Q6ZS27 426 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 MAEAQ7L5Y9 396 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 KSR1Q8IVT5 923 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 ANKRD35Q8N283 1001 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 CLMNQ96JQ2 1002 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 CCDC42Q96M95 316 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 MKNK1Q9BUB5 465 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 HAUS4Q9H6D7 363 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 JPH1Q9HDC5 661 aaPredicted RBP10.56□□□□□ -0.72
CLIP1-212ENST00000540304 BTBD7Q9P203 1132 aa10.56□□□□□ -0.72
CLIP1-212ENST00000540304 SPATA31C2B4DYI2 1134 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 MYO1CO00159 1063 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 NOL4O94818 638 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 STXBP2Q15833 593 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 XKR9Q5GH70 373 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 DCAF17Q5H9S7 520 aaPredicted RBP10.55□□□□□ -0.72
CLIP1-212ENST00000540304 SYN2Q92777 582 aaPredicted RBP10.55□□□□□ -0.72
CLIP1-212ENST00000540304 ATP6V0A1Q93050 837 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 CRACR2AQ9BSW2 395 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 AGPAT3Q9NRZ7 376 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 ARHGAP20Q9P2F6 1191 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 SCN4AP35499 1836 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 TMEM150BA6NC51 233 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 COQ9O75208 318 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 PSAPP07602 524 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 SCP2P22307 547 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 PPIL2Q13356 520 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 PLA2G4FQ68DD2 849 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 OTUD6AQ7L8S5 288 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 CCDC91Q7Z6B0 441 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 KIAA1328Q86T90 577 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 FAM186BQ8IYM0 893 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 SYCP3Q8IZU3 236 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 SH2D3AQ9BRG2 576 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 SPATC1LQ9H0A9 340 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 TMEM206Q9H813 350 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 NLRC4Q9NPP4 1024 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 DMAC2Q9NW81 257 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 GABBR1Q9UBS5 961 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 SLC9A2Q9UBY0 812 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 LCMT1Q9UIC8 334 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 KCNH4Q9UQ05 1017 aa10.55□□□□□ -0.72
CLIP1-212ENST00000540304 H0YHG0 523 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 PEX10O60683 326 aa10.54□□□□□ -0.72
CLIP1-212ENST00000540304 EIF3JO75822 258 aaKnown RBP10.54□□□□□ -0.72
CLIP1-212ENST00000540304 PLEKP08567 350 aaPredicted RBP10.54□□□□□ -0.72
CLIP1-212ENST00000540304 ALDH5A1P51649 535 aaPredicted RBP10.54□□□□□ -0.72
CLIP1-212ENST00000540304 POLR2FP61218 127 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms