RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 RABGAP1Q9Y3P9 1069 aa7.24□□□□□ -1.25
MRE11-209ENST00000540013 RWDD3Q9Y3V2 267 aa7.24□□□□□ -1.25
MRE11-209ENST00000540013 NPHP4O75161 1426 aaPredicted RBP7.24□□□□□ -1.25
MRE11-209ENST00000540013 MED14O60244 1454 aa7.24□□□□□ -1.25
MRE11-209ENST00000540013 PIK3C2BO00750 1634 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 ROCK1Q13464 1354 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 TET3O43151 1660 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 KDM5AP29375 1690 aaKnown RBP7.23□□□□□ -1.25
MRE11-209ENST00000540013 GCC2Q8IWJ2 1684 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 EFCAB14O75071 495 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 DNAJC8O75937 253 aaPredicted RBP7.23□□□□□ -1.25
MRE11-209ENST00000540013 ZRANB2O95218 330 aaKnown RBP eCLIP7.23□□□□□ -1.25
MRE11-209ENST00000540013 MSL3P1P0C860 447 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 GALK1P51570 392 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 GPR85P60893 370 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 YBX1P67809 324 aaKnown RBP7.23□□□□□ -1.25
MRE11-209ENST00000540013 TMPRSS15P98073 1019 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 BIRC3Q13489 604 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 RAB3GAP1Q15042 981 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 KIZQ2M2Z5 673 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 CCDC93Q567U6 631 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 DENND5AQ6IQ26 1287 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 PRR23BQ6ZRT6 265 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 DCP2Q8IU60 420 aaKnown RBP7.23□□□□□ -1.25
MRE11-209ENST00000540013 RIOX2Q8IUF8 465 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 Q8N1Y9 231 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 NGDNQ8NEJ9 315 aaKnown RBP7.23□□□□□ -1.25
MRE11-209ENST00000540013 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.23□□□□□ -1.25
MRE11-209ENST00000540013 COG1Q8WTW3 980 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 ERP27Q96DN0 273 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 PEX11GQ96HA9 241 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 CHAMP1Q96JM3 812 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 FAM84AQ96KN4 292 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 PPP1R16BQ96T49 567 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 SLC38A3Q99624 504 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 MENTQ9BUN1 341 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 DDX21Q9NR30 783 aaKnown RBP eCLIP7.23□□□□□ -1.25
MRE11-209ENST00000540013 KLHL11Q9NVR0 708 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.23□□□□□ -1.25
MRE11-209ENST00000540013 TMEFF2Q9UIK5 374 aaPredicted RBP7.23□□□□□ -1.25
MRE11-209ENST00000540013 DBR1Q9UK59 544 aaKnown RBP7.23□□□□□ -1.25
MRE11-209ENST00000540013 PCDHA2Q9Y5H9 948 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 MORC2Q9Y6X9 1032 aaPredicted RBP7.23□□□□□ -1.25
MRE11-209ENST00000540013 UNC13BO14795 1591 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 RPGRIP1LQ68CZ1 1315 aa7.23□□□□□ -1.25
MRE11-209ENST00000540013 MYO5BQ9ULV0 1848 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 SLIT1O75093 1534 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 SYNMO15061 1565 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 NOS1P29475 1434 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 ZEB2O60315 1214 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 SEMA7AO75326 666 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 FUCA1P04066 466 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 DBHP09172 617 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 GLI4P10075 376 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 TACR1P25103 407 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 MAPKAPK2P49137 400 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 GRM3Q14832 879 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 SLC9A5Q14940 896 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 KIR3DS1Q14943 382 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 PCBP1Q15365 356 aaKnown RBP eCLIP7.22□□□□□ -1.25
MRE11-209ENST00000540013 CHRNA2Q15822 529 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 SEPT7Q16181 437 aaKnown RBP7.22□□□□□ -1.25
MRE11-209ENST00000540013 PTPN21Q16825 1174 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 CCDC184Q52MB2 194 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 GPR158Q5T848 1215 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 C1orf228Q6PIY5 440 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 ZNF605Q86T29 641 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 BHLHE22Q8NFJ8 381 aaPredicted RBP7.22□□□□□ -1.25
MRE11-209ENST00000540013 USP7Q93009 1102 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 CLIP3Q96DZ5 547 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 ALG1Q9BT22 464 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 AP5M1Q9H0R1 490 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 IFT22Q9H7X7 185 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 IFT122Q9HBG6 1241 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 NLRC4Q9NPP4 1024 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 MAN1C1Q9NR34 630 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 BTG4Q9NY30 223 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 CLIC5Q9NZA1 410 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 NOL7Q9UMY1 257 aaKnown RBP7.22□□□□□ -1.25
MRE11-209ENST00000540013 APOBEC2Q9Y235 224 aaKnown RBP7.22□□□□□ -1.25
MRE11-209ENST00000540013 ANKRD6Q9Y2G4 727 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 DGKBQ9Y6T7 804 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 RPRD2Q5VT52 1461 aaKnown RBP7.22□□□□□ -1.25
MRE11-209ENST00000540013 SCAF11Q99590 1463 aaKnown RBP7.22□□□□□ -1.25
MRE11-209ENST00000540013 ARHGAP23Q9P227 1491 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 CPS1P31327 1500 aa7.22□□□□□ -1.25
MRE11-209ENST00000540013 NUDT19A8MXV4 375 aa7.21□□□□□ -1.26
MRE11-209ENST00000540013 C22orf46C9J442 243 aa7.21□□□□□ -1.26
MRE11-209ENST00000540013 SNUPNO95149 360 aaKnown RBP7.21□□□□□ -1.26
MRE11-209ENST00000540013 ZBTB7AO95365 584 aa7.21□□□□□ -1.26
MRE11-209ENST00000540013 BPIP17213 487 aa7.21□□□□□ -1.26
MRE11-209ENST00000540013 CYP2C19P33261 490 aa7.21□□□□□ -1.26
MRE11-209ENST00000540013 BCL6P41182 706 aa7.21□□□□□ -1.26
MRE11-209ENST00000540013 GTF2H3Q13889 308 aa7.21□□□□□ -1.26
MRE11-209ENST00000540013 CCDC96Q2M329 555 aa7.21□□□□□ -1.26
MRE11-209ENST00000540013 TRIM61Q5EBN2 209 aa7.21□□□□□ -1.26
MRE11-209ENST00000540013 TMEM132EQ6IEE7 984 aa7.21□□□□□ -1.26
MRE11-209ENST00000540013 ZC3H14Q6PJT7 736 aaKnown RBP7.21□□□□□ -1.26
MRE11-209ENST00000540013 CEP68Q76N32 757 aa7.21□□□□□ -1.26
MRE11-209ENST00000540013 KRT77Q7Z794 578 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms