RNA–Protein interactions for RNA: ENST00000539722.5

PRKCQ-203, Transcript of protein kinase C theta, humanhuman

TSL 2 BASIC

Gene PRKCQ, Length 3,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCQ-203ENST00000539722 ECEL1O95672 775 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 FGFR1OPO95684 399 aaKnown RBP13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 CYP2D6P10635 497 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 GNAT2P19087 354 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 KCNJ1P48048 391 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 GNAQP50148 359 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 PUM3Q15397 648 aaKnown RBP13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 EXOC3L4Q17RC7 722 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 RFWD3Q6PCD5 774 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 VSTM1Q6UX27 236 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 COL23A1Q86Y22 540 aaPredicted RBP13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 ASAP3Q8TDY4 903 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 DDX12PQ92771 950 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 POP1Q99575 1024 aaKnown RBP13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 TMX4Q9H1E5 349 aaPredicted RBP13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 VCXQ9H320 206 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 BLOC1S4Q9NUP1 217 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 SCOCQ9UIL1 159 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 PFASO15067 1338 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 MAGEB6P1A0A0J9YX57 407 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 TMEM110-MUSTN1A8MSY1 372 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 NVLO15381 856 aaKnown RBP13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 RIPK2O43353 540 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 ATP9AO75110 1047 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 IRF2BP2Q7Z5L9 587 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 ADAM33Q9BZ11 813 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 CCDC134Q9H6E4 229 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 SEPT11Q9NVA2 429 aaKnown RBP13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 AMFRQ9UKV5 643 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 USH1CQ9Y6N9 552 aa13.17□□□□□ -0.3
PRKCQ-203ENST00000539722 BAZ2AQ9UIF9 1905 aaKnown RBP13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 PCDH11XQ9BZA7 1347 aa13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 MEGF6O75095 1541 aa13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 H2AFZP0C0S5 128 aa13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 BRAFP15056 766 aa13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 CACNA2D1P54289 1103 aa13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 MEX3CQ5U5Q3 659 aaKnown RBP13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 RASIP1Q5U651 963 aa13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 SPTY2D1Q68D10 685 aaPredicted RBP13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 H2AFVQ71UI9 128 aa13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 GUF1Q8N442 669 aaKnown RBP13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 ZBTB38Q8NAP3 1195 aaPredicted RBP13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 RBM46Q8TBY0 533 aaKnown RBP13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 ARMCX3Q9UH62 379 aaPredicted RBP13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 FBXO3Q9UK99 471 aa13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 AJAP1Q9UKB5 411 aaPredicted RBP13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 ASAP1Q9ULH1 1129 aa13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 TBX22Q9Y458 520 aa13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 LMTK3Q96Q04 1460 aa13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 IRS4O14654 1257 aaPredicted RBP13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 CALM1P0DP23 149 aa13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 CALM2P0DP24 149 aa13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 CALM3P0DP25 149 aa13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 CCNB1P14635 433 aa13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 RASA1P20936 1047 aa13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 PTENP60484 403 aa13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 GRB10Q13322 594 aa13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 LBRQ14739 615 aaKnown RBP13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 CERKLQ49MI3 558 aaPredicted RBP13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 KHDC1Q4VXA5 237 aaKnown RBP13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 UNC13DQ70J99 1090 aa13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 SRRM1Q8IYB3 904 aaKnown RBP13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 ZFAND2BQ8WV99 257 aa13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 LARP4BQ92615 738 aaKnown RBP13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 PREBQ9HCU5 417 aa13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 SLCO1B3Q9NPD5 702 aa13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 GRHL1Q9NZI5 618 aa13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 IGSF9BQ9UPX0 1349 aa13.16□□□□□ -0.3
PRKCQ-203ENST00000539722 TSPY2A6NKD2 308 aa13.15□□□□□ -0.3
PRKCQ-203ENST00000539722 GSTT1P30711 240 aa13.15□□□□□ -0.3
PRKCQ-203ENST00000539722 CTSWP56202 376 aa13.15□□□□□ -0.3
PRKCQ-203ENST00000539722 FKBP3Q00688 224 aaKnown RBP13.15□□□□□ -0.3
PRKCQ-203ENST00000539722 LRRC63Q05C16 580 aa13.15□□□□□ -0.3
PRKCQ-203ENST00000539722 DCAF17Q5H9S7 520 aaPredicted RBP13.15□□□□□ -0.3
PRKCQ-203ENST00000539722 TCERG1LQ5VWI1 586 aa13.15□□□□□ -0.3
PRKCQ-203ENST00000539722 RASGEF1CQ8N431 466 aa13.15□□□□□ -0.3
PRKCQ-203ENST00000539722 CABLES1Q8TDN4 633 aa13.15□□□□□ -0.3
PRKCQ-203ENST00000539722 NDNQ99608 321 aa13.15□□□□□ -0.3
PRKCQ-203ENST00000539722 PITPNM3Q9BZ71 974 aa13.15□□□□□ -0.3
PRKCQ-203ENST00000539722 TRMT112Q9UI30 125 aaKnown RBP13.15□□□□□ -0.3
PRKCQ-203ENST00000539722 SLIT3O75094 1523 aa13.15□□□□□ -0.3
PRKCQ-203ENST00000539722 CES2O00748 559 aa13.15□□□□□ -0.3
PRKCQ-203ENST00000539722 DDAH1O94760 285 aa13.15□□□□□ -0.3
PRKCQ-203ENST00000539722 KCNH2Q12809 1159 aa13.15□□□□□ -0.3
PRKCQ-203ENST00000539722 DNAJC3Q13217 504 aa13.15□□□□□ -0.3
PRKCQ-203ENST00000539722 MYOCDQ8IZQ8 938 aa13.15□□□□□ -0.3
PRKCQ-203ENST00000539722 LRRC8CQ8TDW0 803 aa13.15□□□□□ -0.3
PRKCQ-203ENST00000539722 ALG3Q92685 438 aa13.15□□□□□ -0.3
PRKCQ-203ENST00000539722 ZNF512BQ96KM6 892 aaPredicted RBP13.15□□□□□ -0.3
PRKCQ-203ENST00000539722 PWWP2AQ96N64 755 aa13.15□□□□□ -0.3
PRKCQ-203ENST00000539722 EDEM3Q9BZQ6 932 aa13.15□□□□□ -0.3
PRKCQ-203ENST00000539722 VAT1LQ9HCJ6 419 aa13.15□□□□□ -0.3
PRKCQ-203ENST00000539722 RHBDL2Q9NX52 303 aa13.15□□□□□ -0.3
PRKCQ-203ENST00000539722 AIPL1Q9NZN9 384 aa13.15□□□□□ -0.3
PRKCQ-203ENST00000539722 PRKAG3Q9UGI9 489 aa13.15□□□□□ -0.3
PRKCQ-203ENST00000539722 TULP1O00294 542 aaPredicted RBP13.15□□□□□ -0.31
PRKCQ-203ENST00000539722 MARCKSL1P49006 195 aa13.15□□□□□ -0.31
PRKCQ-203ENST00000539722 GALCP54803 685 aa13.15□□□□□ -0.31
PRKCQ-203ENST00000539722 MAPK7Q13164 816 aa13.15□□□□□ -0.31
PRKCQ-203ENST00000539722 PRUNE1Q86TP1 453 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms