RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 BTNL9Q6UXG8 535 aa13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 FRMD5Q7Z6J6 570 aa13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 CYFIP2Q96F07 1278 aa13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 FAM20AQ96MK3 541 aa13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 HSD17B14Q9BPX1 270 aa13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 ZMYM2Q9UBW7 1377 aa13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 SLITRK3O94933 977 aa13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 COG2Q14746 738 aa13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 ASIC2Q16515 512 aa13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 ZC2HC1CQ53FD0 456 aaPredicted RBP13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 DCAF17Q5H9S7 520 aaPredicted RBP13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 RINT1Q6NUQ1 792 aa13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 CCDC121Q6ZUS5 278 aa13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 SLC35C1Q96A29 364 aa13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 BORCS6Q96GS4 357 aa13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 GDF3Q9NR23 364 aa13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 DDX20Q9UHI6 824 aaKnown RBP13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 FBXL5Q9UKA1 691 aa13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 PDXKO00764 312 aa13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 SLC26A4O43511 780 aa13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 NR3C1P04150 777 aa13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 NMT1P30419 496 aaKnown RBP13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 MAGOHP61326 146 aaKnown RBP13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 ITGB3BPQ13352 177 aaPredicted RBP13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 UAP1Q16222 522 aaPredicted RBP13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 OTOP1Q7RTM1 612 aa13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 OLIG1Q8TAK6 271 aa13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 CAVIN3Q969G5 261 aa13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 MAGOHBQ96A72 148 aaKnown RBP13.68□□□□□ -0.22
SFSWAP-208ENST00000539506 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.68□□□□□ -0.221e-11■■■■■ 182.2
SFSWAP-208ENST00000539506 ATRNL1Q5VV63 1379 aa13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 SKAP2O75563 359 aaPredicted RBP13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 GCNT3O95395 438 aa13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 AFPP02771 609 aaKnown RBP13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 EPS15P42566 896 aa13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 BMT2Q1RMZ1 405 aa13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 KDM7AQ6ZMT4 941 aa13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 CDAN1Q8IWY9 1227 aa13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 GIMAP7Q8NHV1 300 aa13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 ERMNQ8TAM6 284 aa13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 TAF4BQ92750 862 aa13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 INPP4AQ96PE3 977 aaPredicted RBP13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 CSRNP1Q96S65 589 aa13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 OSBPL7Q9BZF2 842 aa13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 CHORDC1Q9UHD1 332 aaPredicted RBP13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 GCOM1H8Y6P7 765 aaPredicted RBP13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 CHMP2AO43633 222 aa13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 NPM3O75607 178 aaKnown RBP13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 CYP3A4P08684 503 aa13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 MYZAPP0CAP1 466 aa13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 FKBP1AP62942 108 aaKnown RBP13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 EXOC3L4Q17RC7 722 aa13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 UBAP2Q5T6F2 1119 aaKnown RBP13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 N4BP2L2Q92802 583 aaPredicted RBP13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 FIZ1Q96SL8 496 aa13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 TRIM51Q9BSJ1 452 aa13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 PLCB1Q9NQ66 1216 aa13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 RABGAP1Q9Y3P9 1069 aa13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 NR2E1Q9Y466 385 aa13.67□□□□□ -0.22
SFSWAP-208ENST00000539506 FOSP01100 380 aaPredicted RBP13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 CDR1P51861 262 aa13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 RBM26Q5T8P6 1007 aaKnown RBP13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 TCERG1LQ5VWI1 586 aa13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 C7orf43Q8WVR3 580 aa13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 DYDC2Q96IM9 177 aa13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 POLR3CQ9BUI4 534 aaPredicted RBP13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 TMX4Q9H1E5 349 aaPredicted RBP13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 ATP8A1Q9Y2Q0 1164 aa13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 PCDHB13Q9Y5F0 798 aa13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 PIK3CDO00329 1044 aa13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 TTI1O43156 1089 aa13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 EYA4O95677 639 aa13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 CFBP00751 764 aa13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 ZBTB48P10074 688 aaPredicted RBP13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 EPB41P11171 864 aaKnown RBP13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 XRCC5P13010 732 aaKnown RBP13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 JAM2P57087 298 aa13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 KRT71Q3SY84 523 aa13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 C1orf186Q6ZWK4 172 aa13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 TPH2Q8IWU9 490 aa13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 TYW1Q9NV66 732 aaKnown RBP13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 NAGPAQ9UK23 515 aa13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 SUFUQ9UMX1 484 aa13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 NENFQ9UMX5 172 aa13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 PSMD10O75832 226 aa13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 DHX9Q08211 1270 aaKnown RBP13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 RPS6KA1Q15418 735 aa13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 SWT1Q5T5J6 900 aaKnown RBP13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 CPLX4Q7Z7G2 160 aa13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 CCDC113Q9H0I3 377 aa13.66□□□□□ -0.22
SFSWAP-208ENST00000539506 TCP10L2B9ZVM9 353 aa13.65□□□□□ -0.22
SFSWAP-208ENST00000539506 SART1O43290 800 aaKnown RBP13.65□□□□□ -0.22
SFSWAP-208ENST00000539506 BUB1BO60566 1050 aaPredicted RBP13.65□□□□□ -0.22
SFSWAP-208ENST00000539506 ZNF76P36508 570 aa13.65□□□□□ -0.22
SFSWAP-208ENST00000539506 SLCO1A2P46721 670 aa13.65□□□□□ -0.22
SFSWAP-208ENST00000539506 ZNF844Q08AG5 666 aa13.65□□□□□ -0.22
SFSWAP-208ENST00000539506 CCDC174Q6PII3 467 aa13.65□□□□□ -0.22
SFSWAP-208ENST00000539506 LRRC57Q8N9N7 239 aa13.65□□□□□ -0.22
SFSWAP-208ENST00000539506 CALUO43852 315 aaPredicted RBP13.65□□□□□ -0.22
SFSWAP-208ENST00000539506 ABCB4P21439 1286 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms