RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 TTC9BQ8N6N2 239 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 LINC00482Q8N8I6 264 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 ARRDC4Q8NCT1 418 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 C1orf162Q8NEQ5 155 aaPredicted RBP1.37□□□□□ -2.19
HIF1A-204ENST00000539097 ATL2Q8NHH9 583 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 PPP1R35Q8TAP8 253 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 PIP4K2CQ8TBX8 421 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 KBTBD7Q8WVZ9 684 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 JADE3Q92613 823 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 UBE2FQ969M7 185 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 FOXRED1Q96CU9 486 aaPredicted RBP1.37□□□□□ -2.19
HIF1A-204ENST00000539097 C1GALT1C1Q96EU7 318 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 MAP6Q96JE9 813 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 HRASLS5Q96KN8 279 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 JMJD8Q96S16 334 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 ACO2Q99798 780 aaKnown RBP1.37□□□□□ -2.19
HIF1A-204ENST00000539097 TREX2Q9BQ50 279 aaPredicted RBP1.37□□□□□ -2.19
HIF1A-204ENST00000539097 ISCA1Q9BUE6 129 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 ENKD1Q9H0I2 346 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 ADAMTS10Q9H324 1103 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 ARNT2Q9HBZ2 717 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 RASSF1Q9NS23 344 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 ZSWIM5Q9P217 1185 aa1.37□□□□□ -2.19
HIF1A-204ENST00000539097 SPATA31A3Q5VYP0 1347 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 SAC3D1A6NKF1 404 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 PIP5K1CO60331 668 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 WNT1P04628 370 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 MYL1P05976 194 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 LPLP06858 475 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 ENO2P09104 434 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-204ENST00000539097 GSTM1P09488 218 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 MED14OSP0DP75 135 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 MYBL2P10244 700 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 PF4V1P10720 104 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 CDH2P19022 906 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-204ENST00000539097 CCT5P48643 541 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 SCNN1BP51168 640 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 CCT2P78371 535 aaKnown RBP1.36□□□□□ -2.19
HIF1A-204ENST00000539097 SRSF2Q01130 221 aaKnown RBP1.36□□□□□ -2.19
HIF1A-204ENST00000539097 CNGB1Q14028 1251 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-204ENST00000539097 MSMPQ1L6U9 139 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 NRN1LQ496H8 165 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 PITRM1Q5JRX3 1037 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 TMEM200BQ69YZ2 307 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 KIAA1841Q6NSI8 718 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 XRRA1Q6P2D8 792 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 ATG4DQ86TL0 474 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-204ENST00000539097 MAGEB6Q8N7X4 407 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 PLBD2Q8NHP8 589 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 LMBR1Q8WVP7 490 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 SLC9A6Q92581 669 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 SHISA4Q96DD7 197 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 AJUBAQ96IF1 538 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 MPHOSPH6Q99547 160 aaKnown RBP1.36□□□□□ -2.19
HIF1A-204ENST00000539097 BOCQ9BWV1 1114 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 CDADC1Q9BWV3 514 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 GTPBP4Q9BZE4 634 aaKnown RBP1.36□□□□□ -2.19
HIF1A-204ENST00000539097 WDCPQ9H6R7 721 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 ZNF552Q9H707 407 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-204ENST00000539097 RSAD1Q9HA92 442 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 LRRC4CQ9HCJ2 640 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 CCM2LQ9NUG4 571 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-204ENST00000539097 LIMCH1Q9UPQ0 1083 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 DNM3Q9UQ16 869 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 PPP2R3BQ9Y5P8 575 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 SH3D21A4FU49 640 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 LRRC14BA6NHZ5 514 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 TAF4O00268 1085 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 CYBBP04839 570 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 ALDH2P05091 517 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 CEACAM5P06731 702 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 SYPP08247 313 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 MYL3P08590 195 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 GLI4P10075 376 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 HSD3B1P14060 373 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 C5AR1P21730 350 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 MC3RP41968 323 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 GATA4P43694 442 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 LLGL1Q15334 1064 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 PLA2G4EQ3MJ16 856 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 CT47A1Q5JQC4 288 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-204ENST00000539097 TIGD7Q6NT04 549 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-204ENST00000539097 ESPNLQ6ZVH7 1005 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 DOK3Q7L591 496 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 DGKHQ86XP1 1220 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 ZDHHC13Q8IUH4 622 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 SLC41A1Q8IVJ1 513 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 CMTR2Q8IYT2 770 aaKnown RBP1.36□□□□□ -2.19
HIF1A-204ENST00000539097 MYO1HQ8N1T3 1032 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 SHKBP1Q8TBC3 707 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 CALML6Q8TD86 181 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 TSPEARQ8WU66 669 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 FUBP3Q96I24 572 aaKnown RBP eCLIP1.36□□□□□ -2.196e-6■□□□□ 8.1
HIF1A-204ENST00000539097 TAAR9Q96RI9 348 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 MPHOSPH9Q99550 1183 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 DSCC1Q9BVC3 393 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 NUP62CLQ9H1M0 184 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 SERHLQ9NQF3 203 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 MARCH2Q9P0N8 246 aa1.36□□□□□ -2.19
HIF1A-204ENST00000539097 PIM2Q9P1W9 311 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms