RNA–Protein interactions for RNA: ENST00000538966.5

PLXNB3-209, Transcript of plexin B3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PLXNB3, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-209ENST00000538966 RNF25Q96BH1 459 aaPredicted RBP15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 FAM49AQ9H0Q0 323 aaPredicted RBP15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 NMT2O60551 498 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 MCAMP43121 646 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 ARL13BQ3SXY8 428 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 C1orf146Q5VVC0 180 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 FAM167BQ9BTA0 163 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 E9PMD0 336 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 MYO1CO00159 1063 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 IPO5O00410 1097 aaKnown RBP15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 TAC1P20366 129 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 HADHAP40939 763 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 PPP4R4Q6NUP7 873 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 PPP4R3CPQ6ZMV5 832 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 TMEM60Q9H2L4 133 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 SLC24A3Q9HC58 644 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 APOBEC2Q9Y235 224 aaKnown RBP15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 ABCC3O15438 1527 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 CACNB3P54284 484 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 MDM2Q00987 491 aaPredicted RBP15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 UNC13DQ70J99 1090 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 TTC30AQ86WT1 665 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 GIPC2Q8TF65 315 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 YIPF3Q9GZM5 350 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 PI4KBQ9UBF8 816 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 TRPC5Q9UL62 973 aaPredicted RBP15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 ATP8B3O60423 1300 aa15.16■□□□□ 0.02
PLXNB3-209ENST00000538966 CTIFO43310 598 aaKnown RBP15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 ARL6IP4Q66PJ3 421 aaKnown RBP15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 FRA10AC1Q70Z53 315 aa15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 TADA2BQ86TJ2 420 aa15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 FGFR1OP2Q9NVK5 253 aa15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 TMEM260Q9NX78 707 aa15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 KLHL8Q9P2G9 620 aaPredicted RBP15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 MID2Q9UJV3 735 aa15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 PCDHA6Q9UN73 950 aa15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 PCDHA8Q9Y5H6 950 aa15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 KRT37O76014 449 aa15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 HSPA8P11142 646 aaKnown RBP15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 CCDC144BQ3MJ40 725 aa15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 IQGAP3Q86VI3 1631 aa15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 MCF2P10911 925 aa15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 CAPRIN1Q14444 709 aaKnown RBP15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 ABT1Q9ULW3 272 aaKnown RBP15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 LGALS16A8MUM7 142 aa15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 MAGEA9P43362 315 aa15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 ZNF746Q6NUN9 644 aaPredicted RBP15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 ARMCX2Q7L311 632 aa15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 ROBO2Q9HCK4 1378 aa15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 CCDC188H7C350 402 aa15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 E2F6O75461 281 aa15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 NR3C1P04150 777 aa15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 LIFRP42702 1097 aa15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 WDR75Q8IWA0 830 aaKnown RBP15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 FLAD1Q8NFF5 587 aa15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 CDHR1Q96JP9 859 aa15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 ECT2Q9H8V3 914 aa15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 SRP68Q9UHB9 627 aaKnown RBP15.15■□□□□ 0.02
PLXNB3-209ENST00000538966 NUP85Q9BW27 656 aa15.14■□□□□ 0.01
PLXNB3-209ENST00000538966 ZNF341Q9BYN7 854 aa15.14■□□□□ 0.01
PLXNB3-209ENST00000538966 SLC13A4Q9UKG4 626 aa15.14■□□□□ 0.01
PLXNB3-209ENST00000538966 L3MBTL1Q9Y468 752 aa15.14■□□□□ 0.01
PLXNB3-209ENST00000538966 GPC5P78333 572 aa15.14■□□□□ 0.01
PLXNB3-209ENST00000538966 KCNA1Q09470 495 aa15.14■□□□□ 0.01
PLXNB3-209ENST00000538966 TMEM270Q6UE05 265 aa15.14■□□□□ 0.01
PLXNB3-209ENST00000538966 RAPGEF5Q92565 580 aa15.14■□□□□ 0.01
PLXNB3-209ENST00000538966 WARS2Q9UGM6 360 aaKnown RBP15.14■□□□□ 0.01
PLXNB3-209ENST00000538966 SUFUQ9UMX1 484 aa15.14■□□□□ 0.01
PLXNB3-209ENST00000538966 IGSF1Q8N6C5 1336 aa15.14■□□□□ 0.01
PLXNB3-209ENST00000538966 DRP2Q13474 957 aa15.14■□□□□ 0.01
PLXNB3-209ENST00000538966 DHX38Q92620 1227 aaKnown RBP15.14■□□□□ 0.01
PLXNB3-209ENST00000538966 ZCCHC17Q9NP64 241 aaKnown RBP15.14■□□□□ 0.01
PLXNB3-209ENST00000538966 SYNGAP1Q96PV0 1343 aa15.14■□□□□ 0.01
PLXNB3-209ENST00000538966 CREB3O43889 395 aa15.14■□□□□ 0.01
PLXNB3-209ENST00000538966 KRT33BQ14525 404 aa15.14■□□□□ 0.01
PLXNB3-209ENST00000538966 NLGN1Q8N2Q7 840 aa15.14■□□□□ 0.01
PLXNB3-209ENST00000538966 RAD54LQ92698 747 aa15.14■□□□□ 0.01
PLXNB3-209ENST00000538966 OSBPL9Q96SU4 736 aa15.14■□□□□ 0.01
PLXNB3-209ENST00000538966 C11orf70Q9BRQ4 267 aa15.14■□□□□ 0.01
PLXNB3-209ENST00000538966 FAM213AQ9BRX8 229 aa15.14■□□□□ 0.01
PLXNB3-209ENST00000538966 EIF2AQ9BY44 585 aaKnown RBP15.14■□□□□ 0.01
PLXNB3-209ENST00000538966 FAM8A1Q9UBU6 413 aa15.14■□□□□ 0.01
PLXNB3-209ENST00000538966 PCSK1NQ9UHG2 260 aa15.14■□□□□ 0.01
PLXNB3-209ENST00000538966 DIS3Q9Y2L1 958 aaKnown RBP15.14■□□□□ 0.01
PLXNB3-209ENST00000538966 PDCD6IPQ8WUM4 868 aaKnown RBP15.14■□□□□ 0.01
PLXNB3-209ENST00000538966 CDC42BPGQ6DT37 1551 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 SYNDIG1LA6NDD5 238 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 SLC16A4O15374 487 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 COASYQ13057 564 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 ZNF667Q5HYK9 610 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 SARM1Q6SZW1 724 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 DDX47Q9H0S4 455 aaKnown RBP15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 ABCB11O95342 1321 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 LMNAP02545 664 aaKnown RBP15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 KCNH2Q12809 1159 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 SUSD4Q5VX71 490 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 YY1AP1Q9H869 796 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 SUN2Q9UH99 717 aa15.13■□□□□ 0.01
PLXNB3-209ENST00000538966 PAMP19021 973 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms