RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 GOLPH3Q9H4A6 298 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 ZFP69BQ9UJL9 534 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 USTQ9Y2C2 406 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 TNS3Q68CZ2 1445 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 PFASO15067 1338 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.36□□□□□ -1.23
SCAPER-203ENST00000538941 C21orf2O43822 256 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 BAG2O95816 211 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 GALCP54803 685 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 MIIPQ5JXC2 388 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 TPH2Q8IWU9 490 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 SLC35G2Q8TBE7 412 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.36□□□□□ -1.237e-8■■■■■ 186.3
SCAPER-203ENST00000538941 TMEM260Q9NX78 707 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 EXOC7Q9UPT5 735 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 SIK3Q9Y2K2 1263 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 PCDHGC5Q9Y5F6 944 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 SOX5P35711 763 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 GPC5P78333 572 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 PDCD2Q16342 344 aaPredicted RBP7.36□□□□□ -1.23
SCAPER-203ENST00000538941 EDRF1Q3B7T1 1238 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 WDR44Q5JSH3 913 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 ZNF572Q7Z3I7 529 aaPredicted RBP7.36□□□□□ -1.23
SCAPER-203ENST00000538941 GLYCTKQ8IVS8 523 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 FGD4Q96M96 766 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 CENPKQ9BS16 269 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 ARHGAP23Q9P227 1491 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 PIK3C2AO00443 1686 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 KDM4FA0A1W2PPD8 638 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 TMEM120BA0PK00 339 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 HNRNPCL1O60812 293 aaKnown RBP7.36□□□□□ -1.23
SCAPER-203ENST00000538941 TDP2O95551 362 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 ACTN1P12814 892 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 CA4P22748 312 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 BTDP43251 543 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 CDR2Q01850 454 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 UBE2SQ16763 222 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 BTNL9Q6UXG8 535 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 CAPN12Q6ZSI9 719 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 TRMT1LQ7Z2T5 733 aaKnown RBP7.36□□□□□ -1.23
SCAPER-203ENST00000538941 SREK1Q8WXA9 508 aaKnown RBP7.36□□□□□ -1.23
SCAPER-203ENST00000538941 FAM210AQ96ND0 272 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 WNT8AQ9H1J5 351 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 KANSL2Q9H9L4 492 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 ZFATQ9P243 1243 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 DBR1Q9UK59 544 aaKnown RBP7.36□□□□□ -1.23
SCAPER-203ENST00000538941 AGTPBP1Q9UPW5 1226 aa7.36□□□□□ -1.23
SCAPER-203ENST00000538941 MST1RQ04912 1400 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 TXNDC9O14530 226 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 FOXP2O15409 715 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 SLC16A3O15427 465 aaKnown RBP7.35□□□□□ -1.23
SCAPER-203ENST00000538941 CREB3O43889 395 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 SKAP2O75563 359 aaPredicted RBP7.35□□□□□ -1.23
SCAPER-203ENST00000538941 MAPK4P31152 587 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 CTCFP49711 727 aaPredicted RBP7.35□□□□□ -1.23
SCAPER-203ENST00000538941 FXR2P51116 673 aaKnown RBP eCLIP7.35□□□□□ -1.23
SCAPER-203ENST00000538941 MFAP3P55082 362 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 CYP4A11Q02928 519 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 TRIP13Q15645 432 aaPredicted RBP7.35□□□□□ -1.23
SCAPER-203ENST00000538941 PPP1R18Q6NYC8 613 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 SFR1Q86XK3 245 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 IRF2BP1Q8IU81 584 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 KIAA0895Q8NCT3 520 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 PIGBQ92521 554 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 CARD9Q9H257 536 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 DNAJC17Q9NVM6 304 aaKnown RBP7.35□□□□□ -1.23
SCAPER-203ENST00000538941 NAGPAQ9UK23 515 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 KAT6BQ8WYB5 2073 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 UBOX5O94941 541 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 TMEM253P0C7T8 217 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 NPEPPSP55786 919 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 DRAP1Q14919 205 aaPredicted RBP7.35□□□□□ -1.23
SCAPER-203ENST00000538941 LONRF1Q17RB8 773 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 SBK1Q52WX2 424 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 GPATCH4Q5T3I0 446 aaKnown RBP7.35□□□□□ -1.23
SCAPER-203ENST00000538941 BARGINQ6ZT62 677 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 ARHGAP18Q8N392 663 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 PPM1KQ8N3J5 372 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 CCDC110Q8TBZ0 833 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 SNF8Q96H20 258 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 PAGR1Q9BTK6 254 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 UBE2TQ9NPD8 197 aaPredicted RBP7.35□□□□□ -1.23
SCAPER-203ENST00000538941 BSDC1Q9NW68 430 aaPredicted RBP7.35□□□□□ -1.23
SCAPER-203ENST00000538941 RAB20Q9NX57 234 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 ZNF804BA4D1E1 1349 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 FAM205AQ6ZU69 1335 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 SPEF2Q9C093 1822 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 NID2Q14112 1375 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 PNMA6FA0A0J9YX94 578 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 F8W031 263 aaPredicted RBP7.35□□□□□ -1.23
SCAPER-203ENST00000538941 MEIS1O00470 390 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 KLRC4O43908 158 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 XRCC4Q13426 336 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 LACTB2Q53H82 288 aaPredicted RBP7.35□□□□□ -1.23
SCAPER-203ENST00000538941 LGSNQ5TDP6 509 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 EP400NLQ6ZTU2 488 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 KSR1Q8IVT5 923 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 PALM2Q8IXS6 379 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 CCDC89Q8N998 374 aa7.35□□□□□ -1.23
SCAPER-203ENST00000538941 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms