RNA–Protein interactions for RNA: ENST00000538859.1

NPIPB4-209, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-209ENST00000538859 PRDM16Q9HAZ2 1276 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 FANCLQ9NW38 375 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 GALNT8Q9NY28 637 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 DDX56Q9NY93 547 aaKnown RBP2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 GPRC5BQ9NZH0 403 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 ARHGAP28Q9P2N2 729 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 CDC42EP3Q9UKI2 254 aa2.29□□□□□ -2.04
NPIPB4-209ENST00000538859 COL3A1P02461 1466 aaPredicted RBP2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 FAM47E-STBD1D6RA91 191 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 AGRPO00253 132 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 ENPP3O14638 875 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 NPHP1O15259 732 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 SLC26A4O43511 780 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 DLX3O60479 287 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 DDAH1O94760 285 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 KRT18P05783 430 aaKnown RBP2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 CENPBP07199 599 aaPredicted RBP2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 FGRP09769 529 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 PTGS2P35354 604 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 ADCY8P40145 1251 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 IRX6P78412 446 aaPredicted RBP2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 IL13RA1P78552 427 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 HGFACQ04756 655 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 HDAC1Q13547 482 aaPredicted RBP2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 CNGB1Q14028 1251 aaPredicted RBP2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 PPP2R5AQ15172 486 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 LARP1BQ659C4 914 aaKnown RBP2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 TMED8Q6PL24 325 aaPredicted RBP2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 CRELD2Q6UXH1 353 aaPredicted RBP2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 SMC5Q8IY18 1101 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 GSPT2Q8IYD1 628 aaKnown RBP2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 RTKN2Q8IZC4 609 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 IFNL3Q8IZI9 196 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 NLGN4XQ8N0W4 816 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 PAF1Q8N7H5 531 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 ZNF366Q8N895 744 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 OR14K1Q8NGZ2 314 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 WDR48Q8TAF3 677 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 SH3TC2Q8TF17 1288 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 MKL1Q969V6 931 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 WNK4Q96J92 1243 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 NAP1L4Q99733 375 aaKnown RBP2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 ZFYVE21Q9BQ24 234 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 IER2Q9BTL4 223 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 CD244Q9BZW8 370 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 EPN3Q9H201 632 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 RIOX1Q9H6W3 641 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 ZNF408Q9H9D4 720 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 AGO3Q9H9G7 860 aaKnown RBP2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 INCENPQ9NQS7 918 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 HOMER2Q9NSB8 354 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 SLC52A1Q9NWF4 448 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 ACTR10Q9NZ32 417 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 ZNHIT2Q9UHR6 403 aa2.28□□□□□ -2.04
NPIPB4-209ENST00000538859 XDHP47989 1333 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 A0A0G2JNJ9 132 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 A0A0U1RQG5 324 aaPredicted RBP2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 A0A1W2PQU0 124 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 FAM90A27PA6NNH2 459 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 B2RBV5 119 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 SMAD7O15105 426 aaKnown RBP2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 SOD2P04179 222 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 PDGFRBP09619 1106 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 PTPN1P18031 435 aaKnown RBP2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 PTGS1P23219 599 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 SCNN1GP51170 649 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 TBX4P57082 545 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 GPR85P60893 370 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 PPP2R2AP63151 447 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 FAM50AQ14320 339 aaKnown RBP2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 STILQ15468 1287 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 ZRSR2Q15696 482 aaKnown RBP2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 FXNQ16595 210 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 TNNI3KQ59H18 835 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 WDR78Q5VTH9 848 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 KCNT2Q6UVM3 1135 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 OTOP2Q7RTS6 562 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 MRGPREQ86SM8 312 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 SH3RF2Q8TEC5 729 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 HNRNPLLQ8WVV9 542 aaKnown RBP2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 PMM1Q92871 262 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 MIEF2Q96C03 454 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 SGSM3Q96HU1 749 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 RPS6KC1Q96S38 1066 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 MPHOSPH6Q99547 160 aaKnown RBP2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 BTBD2Q9BX70 525 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 UBA5Q9GZZ9 404 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 TMX4Q9H1E5 349 aaPredicted RBP2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 RIC8BQ9NVN3 520 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 GEMIN8Q9NWZ8 242 aaKnown RBP2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 SNTG2Q9NY99 539 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 Q9UFV3 132 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 PACSIN3Q9UKS6 424 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 FAM184BQ9ULE4 1060 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 SH3BP1Q9Y3L3 701 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 COMMD10Q9Y6G5 202 aa2.27□□□□□ -2.05
NPIPB4-209ENST00000538859 A0A1W2PRX2 142 aa2.26□□□□□ -2.05
NPIPB4-209ENST00000538859 TCRBV5S4A2TA0A5A2 114 aa2.26□□□□□ -2.05
NPIPB4-209ENST00000538859 ZAR1LA6NP61 321 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms