RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 SOWAHBA6NEL2 793 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 SUPT20HL2P0C7V6 817 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 PON1P27169 355 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 COPB2P35606 906 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 KIF11P52732 1056 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 SNRPFP62306 86 aaKnown RBP16.21■□□□□ 0.19
ATL3-203ENST00000538786 SP2Q02086 613 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 APBA1Q02410 837 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 PPP2R5AQ15172 486 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 SLC9C1Q4G0N8 1177 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 HGSNATQ68CP4 663 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 GBP6Q6ZN66 633 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 CCDC60Q8IWA6 550 aaPredicted RBP16.21■□□□□ 0.19
ATL3-203ENST00000538786 SLC35F6Q8N357 371 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 FAM133AQ8N9E0 248 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 EHBP1Q8NDI1 1231 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 KIFAP3Q92845 792 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 JAKMIP2Q96AA8 810 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 CEP170P1Q96L14 293 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 DEF6Q9H4E7 631 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 GUCA1BQ9UMX6 200 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 TELO2Q9Y4R8 837 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 IGSF9BQ9UPX0 1349 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 CTAGE9A4FU28 777 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 ZNF263O14978 683 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 AKR1B10O60218 316 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 EXOC3O60645 756 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 ATG7O95352 703 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 SERPING1P05155 500 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 SLC9A1P19634 815 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 OSBPP22059 807 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 VAV2P52735 878 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 SMTNP53814 917 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 PEX3P56589 373 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 PRKCEQ02156 737 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 CYP27A1Q02318 531 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 SP4Q02446 784 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 TUBB2AQ13885 445 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 NAA30Q147X3 362 aaPredicted RBP16.21■□□□□ 0.19
ATL3-203ENST00000538786 ASTE1Q2TB18 679 aaPredicted RBP16.21■□□□□ 0.19
ATL3-203ENST00000538786 LDLRAD1Q5T700 205 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 KLHDC7AQ5VTJ3 777 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 PNMA8AQ86V59 439 aaPredicted RBP16.21■□□□□ 0.19
ATL3-203ENST00000538786 TUBB2BQ9BVA1 445 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 TSGA10Q9BZW7 698 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 C17orf75Q9HAS0 396 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 AIPL1Q9NZN9 384 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 TRIM10Q9UDY6 481 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 FBXL5Q9UKA1 691 aa16.21■□□□□ 0.19
ATL3-203ENST00000538786 LCTP09848 1927 aa16.2■□□□□ 0.18
ATL3-203ENST00000538786 SLC16A4O15374 487 aa16.2■□□□□ 0.18
ATL3-203ENST00000538786 TLR2O60603 784 aa16.2■□□□□ 0.18
ATL3-203ENST00000538786 DGAT1O75907 488 aa16.2■□□□□ 0.18
ATL3-203ENST00000538786 UCHL3P15374 230 aa16.2■□□□□ 0.18
ATL3-203ENST00000538786 DMP1Q13316 513 aaPredicted RBP16.2■□□□□ 0.18
ATL3-203ENST00000538786 GPR162Q16538 588 aa16.2■□□□□ 0.18
ATL3-203ENST00000538786 SEPT14Q6ZU15 432 aa16.2■□□□□ 0.18
ATL3-203ENST00000538786 CYFIP1Q7L576 1253 aa16.2■□□□□ 0.18
ATL3-203ENST00000538786 MTERF4Q7Z6M4 381 aaKnown RBP16.2■□□□□ 0.18
ATL3-203ENST00000538786 MNS1Q8NEH6 495 aa16.2■□□□□ 0.18
ATL3-203ENST00000538786 SPIRE2Q8WWL2 714 aa16.2■□□□□ 0.18
ATL3-203ENST00000538786 HVCN1Q96D96 273 aa16.2■□□□□ 0.18
ATL3-203ENST00000538786 RBPJLQ9UBG7 517 aa16.2■□□□□ 0.18
ATL3-203ENST00000538786 RCCD1A6NED2 376 aa16.19■□□□□ 0.18
ATL3-203ENST00000538786 ACTN1P12814 892 aa16.19■□□□□ 0.18
ATL3-203ENST00000538786 KIF5AQ12840 1032 aa16.19■□□□□ 0.18
ATL3-203ENST00000538786 XKR3Q5GH77 459 aa16.19■□□□□ 0.18
ATL3-203ENST00000538786 MCPH1Q8NEM0 835 aa16.19■□□□□ 0.18
ATL3-203ENST00000538786 NAPGQ99747 312 aaPredicted RBP16.19■□□□□ 0.18
ATL3-203ENST00000538786 NTPCRQ9BSD7 190 aaKnown RBP16.19■□□□□ 0.18
ATL3-203ENST00000538786 IFIH1Q9BYX4 1025 aaKnown RBP16.19■□□□□ 0.18
ATL3-203ENST00000538786 LACRTQ9GZZ8 138 aa16.19■□□□□ 0.18
ATL3-203ENST00000538786 PDLIM7Q9NR12 457 aa16.19■□□□□ 0.18
ATL3-203ENST00000538786 CYP26B1Q9NR63 512 aa16.19■□□□□ 0.18
ATL3-203ENST00000538786 GCNT4Q9P109 453 aa16.19■□□□□ 0.18
ATL3-203ENST00000538786 MYO6Q9UM54 1294 aa16.19■□□□□ 0.18
ATL3-203ENST00000538786 PCDHA13Q9Y5I0 950 aa16.19■□□□□ 0.18
ATL3-203ENST00000538786 SYNGAP1Q96PV0 1343 aa16.19■□□□□ 0.18
ATL3-203ENST00000538786 RBAK-RBAKDNI3L0D1 243 aa16.19■□□□□ 0.18
ATL3-203ENST00000538786 NPTX2P47972 431 aa16.19■□□□□ 0.18
ATL3-203ENST00000538786 FMO5P49326 533 aa16.19■□□□□ 0.18
ATL3-203ENST00000538786 RTP1P59025 263 aa16.19■□□□□ 0.18
ATL3-203ENST00000538786 RAPGEF1Q13905 1077 aa16.19■□□□□ 0.18
ATL3-203ENST00000538786 TDRD12Q587J7 1177 aaKnown RBP16.19■□□□□ 0.18
ATL3-203ENST00000538786 GPAT2Q6NUI2 795 aa16.19■□□□□ 0.18
ATL3-203ENST00000538786 LRRN4CLQ8ND94 238 aa16.19■□□□□ 0.18
ATL3-203ENST00000538786 TMEM161BQ8NDZ6 487 aa16.19■□□□□ 0.18
ATL3-203ENST00000538786 MPHOSPH6Q99547 160 aaKnown RBP16.19■□□□□ 0.18
ATL3-203ENST00000538786 CARD6Q9BX69 1037 aa16.19■□□□□ 0.18
ATL3-203ENST00000538786 TXNRD2Q9NNW7 524 aa16.19■□□□□ 0.18
ATL3-203ENST00000538786 SIX2Q9NPC8 291 aa16.19■□□□□ 0.18
ATL3-203ENST00000538786 SEPT9Q9UHD8 586 aaPredicted RBP16.19■□□□□ 0.18
ATL3-203ENST00000538786 TFR2Q9UP52 801 aa16.19■□□□□ 0.18
ATL3-203ENST00000538786 EXOC7Q9UPT5 735 aa16.19■□□□□ 0.18
ATL3-203ENST00000538786 MAFBQ9Y5Q3 323 aaPredicted RBP16.19■□□□□ 0.18
ATL3-203ENST00000538786 UNCXA6NJT0 531 aa16.18■□□□□ 0.18
ATL3-203ENST00000538786 CCDC169A6NNP5 214 aa16.18■□□□□ 0.18
ATL3-203ENST00000538786 SOCS7O14512 581 aa16.18■□□□□ 0.18
ATL3-203ENST00000538786 SORBS3O60504 671 aa16.18■□□□□ 0.18
ATL3-203ENST00000538786 TGFB3P10600 412 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms