RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 RALGAPA2Q2PPJ7 1873 aa24.04■■□□□ 1.44
CCDC78-215ENST00000538176 C9IYK1 514 aa24.04■■□□□ 1.44
CCDC78-215ENST00000538176 GAS2O43903 313 aaKnown RBP24.04■■□□□ 1.44
CCDC78-215ENST00000538176 NEMFO60524 1076 aa24.04■■□□□ 1.44
CCDC78-215ENST00000538176 DARSP14868 501 aaKnown RBP24.04■■□□□ 1.44
CCDC78-215ENST00000538176 CTNNB1P35222 781 aa24.04■■□□□ 1.44
CCDC78-215ENST00000538176 TIGD5Q53EQ6 642 aa24.04■■□□□ 1.44
CCDC78-215ENST00000538176 ZNF410Q86VK4 478 aa24.04■■□□□ 1.44
CCDC78-215ENST00000538176 FBXO18Q8NFZ0 1043 aa24.04■■□□□ 1.44
CCDC78-215ENST00000538176 NLRP7Q8WX94 980 aa24.04■■□□□ 1.44
CCDC78-215ENST00000538176 P2RX5Q93086 422 aa24.04■■□□□ 1.44
CCDC78-215ENST00000538176 TMEM161AQ9NX61 479 aa24.04■■□□□ 1.44
CCDC78-215ENST00000538176 KIF3AQ9Y496 699 aa24.04■■□□□ 1.44
CCDC78-215ENST00000538176 HOXA2O43364 376 aa24.03■■□□□ 1.44
CCDC78-215ENST00000538176 RFC5P40937 340 aa24.03■■□□□ 1.44
CCDC78-215ENST00000538176 SPIRE1Q08AE8 756 aa24.03■■□□□ 1.44
CCDC78-215ENST00000538176 NCAPH2Q6IBW4 605 aa24.03■■□□□ 1.44
CCDC78-215ENST00000538176 CEP170P1Q96L14 293 aa24.03■■□□□ 1.44
CCDC78-215ENST00000538176 PPP1R16BQ96T49 567 aa24.03■■□□□ 1.44
CCDC78-215ENST00000538176 TTC12Q9H892 705 aaPredicted RBP24.03■■□□□ 1.44
CCDC78-215ENST00000538176 CHST12Q9NRB3 414 aa24.03■■□□□ 1.44
CCDC78-215ENST00000538176 DACT1Q9NYF0 836 aa24.03■■□□□ 1.44
CCDC78-215ENST00000538176 FAM205CA6NFA0 338 aa24.02■■□□□ 1.44
CCDC78-215ENST00000538176 YWHABP31946 246 aaKnown RBP24.02■■□□□ 1.44
CCDC78-215ENST00000538176 DSC3Q14574 896 aa24.02■■□□□ 1.44
CCDC78-215ENST00000538176 LXNQ9BS40 222 aa24.02■■□□□ 1.44
CCDC78-215ENST00000538176 ATP6V0A4Q9HBG4 840 aa24.02■■□□□ 1.44
CCDC78-215ENST00000538176 AAASQ9NRG9 546 aa24.02■■□□□ 1.44
CCDC78-215ENST00000538176 SUCLA2Q9P2R7 463 aaPredicted RBP24.02■■□□□ 1.44
CCDC78-215ENST00000538176 ASAP2O43150 1006 aa24.01■■□□□ 1.43
CCDC78-215ENST00000538176 NCK2O43639 380 aa24.01■■□□□ 1.43
CCDC78-215ENST00000538176 MGEA5O60502 916 aa24.01■■□□□ 1.43
CCDC78-215ENST00000538176 LYPLA2O95372 231 aa24.01■■□□□ 1.43
CCDC78-215ENST00000538176 LINC00271P0C7V0 271 aa24.01■■□□□ 1.43
CCDC78-215ENST00000538176 TCP11Q8WWU5 503 aa24.01■■□□□ 1.43
CCDC78-215ENST00000538176 RSPH1Q8WYR4 309 aa24.01■■□□□ 1.43
CCDC78-215ENST00000538176 MTMR9Q96QG7 549 aa24.01■■□□□ 1.43
CCDC78-215ENST00000538176 DHX33Q9H6R0 707 aaKnown RBP24.01■■□□□ 1.43
CCDC78-215ENST00000538176 NLRC5Q86WI3 1866 aa24■■□□□ 1.43
CCDC78-215ENST00000538176 COL4A4P53420 1690 aaPredicted RBP24■■□□□ 1.43
CCDC78-215ENST00000538176 RBAK-RBAKDNI3L0D1 243 aa24■■□□□ 1.43
CCDC78-215ENST00000538176 SLITRK3O94933 977 aa24■■□□□ 1.43
CCDC78-215ENST00000538176 XRCC6P12956 609 aaKnown RBP eCLIP24■■□□□ 1.43
CCDC78-215ENST00000538176 SFPQP23246 707 aaKnown RBP eCLIP24■■□□□ 1.43
CCDC78-215ENST00000538176 TXKP42681 527 aa24■■□□□ 1.43
CCDC78-215ENST00000538176 TRAPPC10P48553 1259 aa24■■□□□ 1.43
CCDC78-215ENST00000538176 MCM2P49736 904 aa24■■□□□ 1.43
CCDC78-215ENST00000538176 POLGP54098 1239 aaPredicted RBP24■■□□□ 1.43
CCDC78-215ENST00000538176 GNL2Q13823 731 aaKnown RBP24■■□□□ 1.43
CCDC78-215ENST00000538176 HSD17B14Q9BPX1 270 aa24■■□□□ 1.43
CCDC78-215ENST00000538176 EOMESO95936 686 aa23.99■■□□□ 1.43
CCDC78-215ENST00000538176 SKIP12755 728 aa23.99■■□□□ 1.43
CCDC78-215ENST00000538176 FOSBP53539 338 aa23.99■■□□□ 1.43
CCDC78-215ENST00000538176 CSPP1Q1MSJ5 1256 aa23.99■■□□□ 1.43
CCDC78-215ENST00000538176 RHPN2Q8IUC4 686 aa23.99■■□□□ 1.43
CCDC78-215ENST00000538176 TPH2Q8IWU9 490 aa23.99■■□□□ 1.43
CCDC78-215ENST00000538176 DYDC2Q96IM9 177 aa23.99■■□□□ 1.43
CCDC78-215ENST00000538176 EIF2AK1Q9BQI3 630 aaKnown RBP23.99■■□□□ 1.43
CCDC78-215ENST00000538176 NSUN3Q9H649 340 aaKnown RBP23.99■■□□□ 1.43
CCDC78-215ENST00000538176 RGL1Q9NZL6 768 aa23.99■■□□□ 1.43
CCDC78-215ENST00000538176 MRPL42Q9Y6G3 142 aaKnown RBP23.99■■□□□ 1.43
CCDC78-215ENST00000538176 CUL9Q8IWT3 2517 aa23.98■■□□□ 1.43
CCDC78-215ENST00000538176 A0A0U1RQF3 1178 aa23.98■■□□□ 1.43
CCDC78-215ENST00000538176 TMEM150BA6NC51 233 aa23.98■■□□□ 1.43
CCDC78-215ENST00000538176 NPEPPSP55786 919 aa23.98■■□□□ 1.43
CCDC78-215ENST00000538176 GUCY1B3Q02153 619 aa23.98■■□□□ 1.43
CCDC78-215ENST00000538176 DRP2Q13474 957 aa23.98■■□□□ 1.43
CCDC78-215ENST00000538176 PLA2G4FQ68DD2 849 aa23.98■■□□□ 1.43
CCDC78-215ENST00000538176 PSPC1Q8WXF1 523 aaKnown RBP23.98■■□□□ 1.43
CCDC78-215ENST00000538176 SH2D3AQ9BRG2 576 aa23.98■■□□□ 1.43
CCDC78-215ENST00000538176 TRAIPQ9BWF2 469 aa23.98■■□□□ 1.43
CCDC78-215ENST00000538176 ANKEF1Q9NU02 776 aa23.98■■□□□ 1.43
CCDC78-215ENST00000538176 NOL7Q9UMY1 257 aaKnown RBP23.98■■□□□ 1.43
CCDC78-215ENST00000538176 PCDHB12Q9Y5F1 795 aa23.98■■□□□ 1.43
CCDC78-215ENST00000538176 A0A087WZ62 844 aa23.97■■□□□ 1.43
CCDC78-215ENST00000538176 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.97■■□□□ 1.43
CCDC78-215ENST00000538176 CTTNQ14247 550 aaKnown RBP23.97■■□□□ 1.43
CCDC78-215ENST00000538176 PCBP1Q15365 356 aaKnown RBP eCLIP23.97■■□□□ 1.43
CCDC78-215ENST00000538176 XKR9Q5GH70 373 aa23.97■■□□□ 1.43
CCDC78-215ENST00000538176 NOSTRINQ8IVI9 506 aa23.97■■□□□ 1.43
CCDC78-215ENST00000538176 PPP2R3CQ969Q6 453 aa23.97■■□□□ 1.43
CCDC78-215ENST00000538176 FDXACB1Q9BRP7 624 aaPredicted RBP23.97■■□□□ 1.43
CCDC78-215ENST00000538176 TMEM117Q9H0C3 514 aa23.97■■□□□ 1.43
CCDC78-215ENST00000538176 WRAP73Q9P2S5 460 aaPredicted RBP23.97■■□□□ 1.43
CCDC78-215ENST00000538176 PLAGL2Q9UPG8 496 aa23.97■■□□□ 1.43
CCDC78-215ENST00000538176 COL4A3BPQ9Y5P4 624 aa23.97■■□□□ 1.43
CCDC78-215ENST00000538176 TBKBP1A7MCY6 615 aa23.96■■□□□ 1.43
CCDC78-215ENST00000538176 BMP1P13497 986 aa23.96■■□□□ 1.43
CCDC78-215ENST00000538176 MCM7P33993 719 aa23.96■■□□□ 1.43
CCDC78-215ENST00000538176 CYP4A11Q02928 519 aa23.96■■□□□ 1.43
CCDC78-215ENST00000538176 MXD4Q14582 209 aaPredicted RBP23.96■■□□□ 1.43
CCDC78-215ENST00000538176 PAN2Q504Q3 1202 aaKnown RBP23.96■■□□□ 1.43
CCDC78-215ENST00000538176 SRGAP1Q7Z6B7 1085 aa23.96■■□□□ 1.43
CCDC78-215ENST00000538176 ABI1Q8IZP0 508 aa23.96■■□□□ 1.43
CCDC78-215ENST00000538176 CARNS1A5YM72 827 aa23.95■■□□□ 1.42
CCDC78-215ENST00000538176 DGAT1O75907 488 aa23.95■■□□□ 1.42
CCDC78-215ENST00000538176 ATP2B1P20020 1258 aa23.95■■□□□ 1.42
CCDC78-215ENST00000538176 TFF2Q03403 129 aa23.95■■□□□ 1.42
CCDC78-215ENST00000538176 UBE3AQ05086 875 aa23.95■■□□□ 1.42
CCDC78-215ENST00000538176 SPOUT1Q5T280 376 aaKnown RBP23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms