RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 IGSF9Q9P2J2 1179 aa12.7□□□□□ -0.38
CLPB-208ENST00000538021 WNT16Q9UBV4 365 aa12.7□□□□□ -0.38
CLPB-208ENST00000538021 EVPLQ92817 2033 aa12.7□□□□□ -0.38
CLPB-208ENST00000538021 KMT2BQ9UMN6 2715 aaPredicted RBP12.7□□□□□ -0.38
CLPB-208ENST00000538021 CEP250Q9BV73 2442 aa12.7□□□□□ -0.38
CLPB-208ENST00000538021 COL1A2P08123 1366 aa12.69□□□□□ -0.38
CLPB-208ENST00000538021 ZC3H11AO75152 810 aaKnown RBP eCLIP12.69□□□□□ -0.38
CLPB-208ENST00000538021 GPR32O75388 356 aa12.69□□□□□ -0.38
CLPB-208ENST00000538021 ATG7O95352 703 aa12.69□□□□□ -0.38
CLPB-208ENST00000538021 SP9P0CG40 484 aa12.69□□□□□ -0.38
CLPB-208ENST00000538021 CTSAP10619 480 aa12.69□□□□□ -0.38
CLPB-208ENST00000538021 KIF5BP33176 963 aa12.69□□□□□ -0.38
CLPB-208ENST00000538021 TBC1D8BQ0IIM8 1120 aa12.69□□□□□ -0.38
CLPB-208ENST00000538021 ITGB3BPQ13352 177 aaPredicted RBP12.69□□□□□ -0.38
CLPB-208ENST00000538021 LETM2Q2VYF4 491 aa12.69□□□□□ -0.38
CLPB-208ENST00000538021 PDXDC2PQ6P474 469 aa12.69□□□□□ -0.38
CLPB-208ENST00000538021 PPFIBP1Q86W92 1011 aa12.69□□□□□ -0.38
CLPB-208ENST00000538021 TMEM173Q86WV6 379 aaPredicted RBP12.69□□□□□ -0.38
CLPB-208ENST00000538021 CKAP2LQ8IYA6 745 aa12.69□□□□□ -0.38
CLPB-208ENST00000538021 CMTR1Q8N1G2 835 aaKnown RBP12.69□□□□□ -0.38
CLPB-208ENST00000538021 RSAD2Q8WXG1 361 aa12.69□□□□□ -0.38
CLPB-208ENST00000538021 MRPL9Q9BYD2 267 aaKnown RBP12.69□□□□□ -0.38
CLPB-208ENST00000538021 TBC1D17Q9HA65 648 aa12.69□□□□□ -0.38
CLPB-208ENST00000538021 AGO4Q9HCK5 861 aaKnown RBP12.69□□□□□ -0.38
CLPB-208ENST00000538021 ZNF302Q9NR11 478 aa12.69□□□□□ -0.38
CLPB-208ENST00000538021 DENND4AQ7Z401 1863 aa12.69□□□□□ -0.38
CLPB-208ENST00000538021 CFAP47Q6ZTR5 3102 aa12.68□□□□□ -0.38
CLPB-208ENST00000538021 hCG_1642624A0A1W2PR95 340 aa12.68□□□□□ -0.38
CLPB-208ENST00000538021 ZBTB42B2RXF5 422 aa12.68□□□□□ -0.38
CLPB-208ENST00000538021 PLEKHA8P1O95397 391 aa12.68□□□□□ -0.38
CLPB-208ENST00000538021 C22orf31O95567 290 aa12.68□□□□□ -0.38
CLPB-208ENST00000538021 GBP2P32456 591 aaPredicted RBP12.68□□□□□ -0.38
CLPB-208ENST00000538021 NLRP11P59045 1033 aaKnown RBP12.68□□□□□ -0.38
CLPB-208ENST00000538021 NONOQ15233 471 aaKnown RBP eCLIP12.68□□□□□ -0.38
CLPB-208ENST00000538021 B4GALNT3Q6L9W6 998 aa12.68□□□□□ -0.38
CLPB-208ENST00000538021 C1orf210Q8IVY1 113 aa12.68□□□□□ -0.38
CLPB-208ENST00000538021 CCDC60Q8IWA6 550 aaPredicted RBP12.68□□□□□ -0.38
CLPB-208ENST00000538021 ZNF668Q96K58 619 aaPredicted RBP12.68□□□□□ -0.38
CLPB-208ENST00000538021 AKT3Q9Y243 479 aa12.68□□□□□ -0.38
CLPB-208ENST00000538021 IRAK3Q9Y616 596 aa12.68□□□□□ -0.38
CLPB-208ENST00000538021 OTOGLQ3ZCN5 2332 aa12.67□□□□□ -0.38
CLPB-208ENST00000538021 IGKV6D-21A0A0A0MT36 114 aa12.67□□□□□ -0.38
CLPB-208ENST00000538021 A0A0U1RQF3 1178 aa12.67□□□□□ -0.38
CLPB-208ENST00000538021 KINO60870 393 aaKnown RBP12.67□□□□□ -0.38
CLPB-208ENST00000538021 CCNE2O96020 404 aa12.67□□□□□ -0.38
CLPB-208ENST00000538021 CYP21A2P08686 494 aa12.67□□□□□ -0.38
CLPB-208ENST00000538021 KLRC2P26717 231 aa12.67□□□□□ -0.38
CLPB-208ENST00000538021 SMARCA1P28370 1054 aa12.67□□□□□ -0.38
CLPB-208ENST00000538021 CLCN3P51790 818 aa12.67□□□□□ -0.38
CLPB-208ENST00000538021 POLGP54098 1239 aaPredicted RBP12.67□□□□□ -0.38
CLPB-208ENST00000538021 CEP55Q53EZ4 464 aa12.67□□□□□ -0.38
CLPB-208ENST00000538021 SWSAP1Q6NVH7 229 aa12.67□□□□□ -0.38
CLPB-208ENST00000538021 ABHD15Q6UXT9 468 aa12.67□□□□□ -0.38
CLPB-208ENST00000538021 DDX53Q86TM3 631 aaKnown RBP12.67□□□□□ -0.38
CLPB-208ENST00000538021 ZNF654Q8IZM8 581 aa12.67□□□□□ -0.38
CLPB-208ENST00000538021 SRBD1Q8N5C6 995 aaKnown RBP12.67□□□□□ -0.38
CLPB-208ENST00000538021 NCOA7Q8NI08 942 aa12.67□□□□□ -0.38
CLPB-208ENST00000538021 IGSF21Q96ID5 467 aa12.67□□□□□ -0.38
CLPB-208ENST00000538021 PGBD1Q96JS3 809 aa12.67□□□□□ -0.38
CLPB-208ENST00000538021 SCLT1Q96NL6 688 aa12.67□□□□□ -0.38
CLPB-208ENST00000538021 LZTS2Q9BRK4 669 aa12.67□□□□□ -0.38
CLPB-208ENST00000538021 IL25Q9H293 177 aa12.67□□□□□ -0.38
CLPB-208ENST00000538021 NCDNQ9UBB6 729 aa12.67□□□□□ -0.38
CLPB-208ENST00000538021 SIT1Q9Y3P8 196 aa12.67□□□□□ -0.38
CLPB-208ENST00000538021 U3KPZ7 1027 aaPredicted RBP12.67□□□□□ -0.38
CLPB-208ENST00000538021 CACNA1GO43497 2377 aa12.66□□□□□ -0.38
CLPB-208ENST00000538021 ACACBO00763 2458 aa12.66□□□□□ -0.38
CLPB-208ENST00000538021 DDAH1O94760 285 aa12.66□□□□□ -0.38
CLPB-208ENST00000538021 SSBP05455 408 aaKnown RBP eCLIP12.66□□□□□ -0.38
CLPB-208ENST00000538021 ATP4AP20648 1035 aa12.66□□□□□ -0.38
CLPB-208ENST00000538021 FGFR4P22455 802 aa12.66□□□□□ -0.38
CLPB-208ENST00000538021 EIF4BP23588 611 aaKnown RBP12.66□□□□□ -0.38
CLPB-208ENST00000538021 ZNF76P36508 570 aa12.66□□□□□ -0.38
CLPB-208ENST00000538021 GNAQP50148 359 aa12.66□□□□□ -0.38
CLPB-208ENST00000538021 ATXN1P54253 815 aaKnown RBP12.66□□□□□ -0.38
CLPB-208ENST00000538021 HDAC1Q13547 482 aaPredicted RBP12.66□□□□□ -0.38
CLPB-208ENST00000538021 PTPN14Q15678 1187 aa12.66□□□□□ -0.38
CLPB-208ENST00000538021 ST3GAL2Q16842 350 aa12.66□□□□□ -0.38
CLPB-208ENST00000538021 LONRF3Q496Y0 759 aa12.66□□□□□ -0.38
CLPB-208ENST00000538021 MIS18BP1Q6P0N0 1132 aa12.66□□□□□ -0.38
CLPB-208ENST00000538021 HEATR3Q7Z4Q2 680 aa12.66□□□□□ -0.38
CLPB-208ENST00000538021 ZNF598Q86UK7 904 aaKnown RBP12.66□□□□□ -0.38
CLPB-208ENST00000538021 PLEKHM2Q8IWE5 1019 aa12.66□□□□□ -0.38
CLPB-208ENST00000538021 CCDC82Q8N4S0 544 aa12.66□□□□□ -0.38
CLPB-208ENST00000538021 GPR152Q8TDT2 470 aa12.66□□□□□ -0.38
CLPB-208ENST00000538021 IGDCC4Q8TDY8 1250 aa12.66□□□□□ -0.38
CLPB-208ENST00000538021 BBXQ8WY36 941 aaPredicted RBP12.66□□□□□ -0.38
CLPB-208ENST00000538021 MAP7D2Q96T17 732 aa12.66□□□□□ -0.38
CLPB-208ENST00000538021 MAP3K14Q99558 947 aa12.66□□□□□ -0.38
CLPB-208ENST00000538021 EMILIN2Q9BXX0 1053 aa12.66□□□□□ -0.38
CLPB-208ENST00000538021 SPTBN2O15020 2390 aa12.65□□□□□ -0.38
CLPB-208ENST00000538021 C2orf16Q68DN1 1984 aa12.65□□□□□ -0.38
CLPB-208ENST00000538021 E7EWF7 191 aa12.65□□□□□ -0.38
CLPB-208ENST00000538021 N4BP1O75113 896 aaKnown RBP12.65□□□□□ -0.38
CLPB-208ENST00000538021 MYBP10242 640 aa12.65□□□□□ -0.38
CLPB-208ENST00000538021 SRFP11831 508 aa12.65□□□□□ -0.38
CLPB-208ENST00000538021 RXRAP19793 462 aa12.65□□□□□ -0.38
CLPB-208ENST00000538021 SDHBP21912 280 aa12.65□□□□□ -0.38
CLPB-208ENST00000538021 TMOD1P28289 359 aa12.65□□□□□ -0.38
CLPB-208ENST00000538021 CLCN4P51793 760 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms