RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 DCAF8Q5TAQ9 597 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 DAAM2Q86T65 1068 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 SYT2Q8N9I0 419 aaPredicted RBP13.19□□□□□ -0.3
CPSF7-218ENST00000537641 GIMAP7Q8NHV1 300 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 CHMP6Q96FZ7 201 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 GOLPH3Q9H4A6 298 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 RGPD3A6NKT7 1758 aaPredicted RBP13.19□□□□□ -0.3
CPSF7-218ENST00000537641 RGPD4Q7Z3J3 1758 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 TBX3O15119 743 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 DDX3YO15523 660 aaKnown RBP13.19□□□□□ -0.3
CPSF7-218ENST00000537641 NR3C1P04150 777 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 HLA-DOAP06340 250 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 HSPA6P17066 643 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 PPATQ06203 517 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 AP3B2Q13367 1082 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 ITIH4Q14624 930 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 DOK7Q18PE1 504 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 DCAF17Q5H9S7 520 aaPredicted RBP13.19□□□□□ -0.3
CPSF7-218ENST00000537641 CDC42EP5Q6NZY7 148 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 CPLX4Q7Z7G2 160 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 SFR1Q86XK3 245 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 KCTD17Q8N5Z5 321 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 SLC30A5Q8TAD4 765 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 LNX1Q8TBB1 728 aaPredicted RBP13.19□□□□□ -0.3
CPSF7-218ENST00000537641 U2AF1L4Q8WU68 220 aaKnown RBP13.19□□□□□ -0.3
CPSF7-218ENST00000537641 CCT6BQ92526 530 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 PGM2Q96G03 612 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 PSTPIP2Q9H939 334 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 GCNT4Q9P109 453 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 RASAL2Q9UJF2 1139 aa13.19□□□□□ -0.3
CPSF7-218ENST00000537641 ASTN1O14525 1302 aa13.18□□□□□ -0.3
CPSF7-218ENST00000537641 TULP1O00294 542 aaPredicted RBP13.18□□□□□ -0.3
CPSF7-218ENST00000537641 DNM1LO00429 736 aa13.18□□□□□ -0.3
CPSF7-218ENST00000537641 ASAP2O43150 1006 aa13.18□□□□□ -0.3
CPSF7-218ENST00000537641 MMP10P09238 476 aa13.18□□□□□ -0.3
CPSF7-218ENST00000537641 SLC8A1P32418 973 aa13.18□□□□□ -0.3
CPSF7-218ENST00000537641 SHMT1P34896 483 aa13.18□□□□□ -0.3
CPSF7-218ENST00000537641 SCNN1DP51172 638 aa13.18□□□□□ -0.3
CPSF7-218ENST00000537641 CASP5P51878 434 aa13.18□□□□□ -0.3
CPSF7-218ENST00000537641 GALCP54803 685 aa13.18□□□□□ -0.3
CPSF7-218ENST00000537641 DRG2P55039 364 aaKnown RBP13.18□□□□□ -0.3
CPSF7-218ENST00000537641 NBPF9Q3BBW0 867 aa13.18□□□□□ -0.3
CPSF7-218ENST00000537641 DUPD1Q68J44 220 aa13.18□□□□□ -0.3
CPSF7-218ENST00000537641 APOBEC3HQ6NTF7 200 aaKnown RBP13.18□□□□□ -0.3
CPSF7-218ENST00000537641 PODNQ7Z5L7 613 aa13.18□□□□□ -0.3
CPSF7-218ENST00000537641 CCDC197Q8NCU1 140 aa13.18□□□□□ -0.3
CPSF7-218ENST00000537641 OLIG1Q8TAK6 271 aa13.18□□□□□ -0.3
CPSF7-218ENST00000537641 NEK9Q8TD19 979 aa13.18□□□□□ -0.3
CPSF7-218ENST00000537641 SLC35C1Q96A29 364 aa13.18□□□□□ -0.3
CPSF7-218ENST00000537641 HVCN1Q96D96 273 aa13.18□□□□□ -0.3
CPSF7-218ENST00000537641 ANO3Q9BYT9 981 aa13.18□□□□□ -0.3
CPSF7-218ENST00000537641 DPH5Q9H2P9 285 aa13.18□□□□□ -0.3
CPSF7-218ENST00000537641 ZHX3Q9H4I2 956 aa13.18□□□□□ -0.3
CPSF7-218ENST00000537641 CCDC134Q9H6E4 229 aa13.18□□□□□ -0.3
CPSF7-218ENST00000537641 AJAP1Q9UKB5 411 aaPredicted RBP13.18□□□□□ -0.3
CPSF7-218ENST00000537641 SCN9AQ15858 1988 aa13.17□□□□□ -0.3
CPSF7-218ENST00000537641 POTEFA5A3E0 1075 aa13.17□□□□□ -0.3
CPSF7-218ENST00000537641 CCDC169A6NNP5 214 aa13.17□□□□□ -0.3
CPSF7-218ENST00000537641 KIF1CO43896 1103 aaKnown RBP13.17□□□□□ -0.3
CPSF7-218ENST00000537641 AKAP3O75969 853 aa13.17□□□□□ -0.3
CPSF7-218ENST00000537641 FGGP02679 453 aa13.17□□□□□ -0.3
CPSF7-218ENST00000537641 POTEIP0CG38 1075 aa13.17□□□□□ -0.3
CPSF7-218ENST00000537641 RPA1P27694 616 aa13.17□□□□□ -0.3
CPSF7-218ENST00000537641 SOX5P35711 763 aa13.17□□□□□ -0.3
CPSF7-218ENST00000537641 FKBP1AP62942 108 aaKnown RBP13.17□□□□□ -0.3
CPSF7-218ENST00000537641 POTEGQ6S5H5 508 aa13.17□□□□□ -0.3
CPSF7-218ENST00000537641 POTEEQ6S8J3 1075 aa13.17□□□□□ -0.3
CPSF7-218ENST00000537641 GJA10Q969M2 543 aa13.17□□□□□ -0.3
CPSF7-218ENST00000537641 CCDC17Q96LX7 622 aa13.17□□□□□ -0.3
CPSF7-218ENST00000537641 ZDHHC15Q96MV8 337 aa13.17□□□□□ -0.3
CPSF7-218ENST00000537641 ERP44Q9BS26 406 aa13.17□□□□□ -0.3
CPSF7-218ENST00000537641 MRIQ9BWK5 157 aa13.17□□□□□ -0.3
CPSF7-218ENST00000537641 CELF4Q9BZC1 486 aaKnown RBP13.17□□□□□ -0.3
CPSF7-218ENST00000537641 ZDHHC18Q9NUE0 388 aa13.17□□□□□ -0.3
CPSF7-218ENST00000537641 HAUS2Q9NVX0 235 aa13.17□□□□□ -0.3
CPSF7-218ENST00000537641 DNM3Q9UQ16 869 aa13.17□□□□□ -0.3
CPSF7-218ENST00000537641 UBE4BO95155 1302 aa13.17□□□□□ -0.3
CPSF7-218ENST00000537641 CCT8L1PA6NM43 557 aa13.16□□□□□ -0.3
CPSF7-218ENST00000537641 EIF3DO15371 548 aaKnown RBP eCLIP13.16□□□□□ -0.3
CPSF7-218ENST00000537641 BUB1BO60566 1050 aaPredicted RBP13.16□□□□□ -0.3
CPSF7-218ENST00000537641 GAP43P17677 238 aa13.16□□□□□ -0.3
CPSF7-218ENST00000537641 ELF1P32519 619 aa13.16□□□□□ -0.3
CPSF7-218ENST00000537641 NF2P35240 595 aa13.16□□□□□ -0.3
CPSF7-218ENST00000537641 HOXD13P35453 343 aa13.16□□□□□ -0.3
CPSF7-218ENST00000537641 MMP13P45452 471 aa13.16□□□□□ -0.3
CPSF7-218ENST00000537641 CRKP46108 304 aa13.16□□□□□ -0.3
CPSF7-218ENST00000537641 HADHBP55084 474 aaKnown RBP13.16□□□□□ -0.3
CPSF7-218ENST00000537641 EIF6P56537 245 aaKnown RBP13.16□□□□□ -0.3
CPSF7-218ENST00000537641 DR1Q01658 176 aa13.16□□□□□ -0.3
CPSF7-218ENST00000537641 ADCY2Q08462 1091 aa13.16□□□□□ -0.3
CPSF7-218ENST00000537641 SPIRE1Q08AE8 756 aa13.16□□□□□ -0.3
CPSF7-218ENST00000537641 PLS1Q14651 629 aa13.16□□□□□ -0.3
CPSF7-218ENST00000537641 SPRED3Q2MJR0 410 aa13.16□□□□□ -0.3
CPSF7-218ENST00000537641 TCERG1LQ5VWI1 586 aa13.16□□□□□ -0.3
CPSF7-218ENST00000537641 DENND2CQ68D51 928 aa13.16□□□□□ -0.3
CPSF7-218ENST00000537641 BTNL9Q6UXG8 535 aa13.16□□□□□ -0.3
CPSF7-218ENST00000537641 ANKS4BQ8N8V4 417 aa13.16□□□□□ -0.3
CPSF7-218ENST00000537641 CTNNBL1Q8WYA6 563 aaPredicted RBP13.16□□□□□ -0.3
CPSF7-218ENST00000537641 REEP2Q9BRK0 252 aa13.16□□□□□ -0.3
CPSF7-218ENST00000537641 TRIM51Q9BSJ1 452 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms