RNA–Protein interactions for RNA: ENST00000537064.5

POLE-210, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 1 (best)

Gene POLE, Length 8,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-210	ENST00000537064	OXER1	Q8TDS5	423 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	SEPT8	Q92599	483 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	CSRNP1	Q96S65	589 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	DCLRE1B	Q9H816	532 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	PIH1D3	Q9NQM4	214 aa	Known RBP	11.47	□□□□□ -0.57
POLE-210	ENST00000537064	ENO4	A6NNW6	628 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064		H0Y3Z8	333 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	ZFX	P17010	805 aa	Predicted RBP	11.47	□□□□□ -0.57
POLE-210	ENST00000537064	KCNA3	P22001	575 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	ZKSCAN4	Q969J2	545 aa	Predicted RBP	11.47	□□□□□ -0.57
POLE-210	ENST00000537064	ACCS	Q96QU6	501 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	PLA2G12B	Q9BX93	195 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	MRGBP	Q9NV56	204 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	DDX20	Q9UHI6	824 aa	Known RBP	11.47	□□□□□ -0.57
POLE-210	ENST00000537064	C15orf41	Q9Y2V0	281 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.47	□□□□□ -0.57
POLE-210	ENST00000537064	MCF2L	O15068	1137 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	SHOX2	O60902	331 aa	Predicted RBP	11.47	□□□□□ -0.57
POLE-210	ENST00000537064	RFC4	P35249	363 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	TMEM154	Q6P9G4	183 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	AIPL1	Q9NZN9	384 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	CEMIP	Q8WUJ3	1361 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	CTCF	P49711	727 aa	Predicted RBP	11.47	□□□□□ -0.57
POLE-210	ENST00000537064	PAPOLA	P51003	745 aa	Known RBP	11.47	□□□□□ -0.57
POLE-210	ENST00000537064	C1orf146	Q5VVC0	180 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	KRT80	Q6KB66	452 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	LRRN4CL	Q8ND94	238 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	WDR11	Q9BZH6	1224 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	PFDN4	Q9NQP4	134 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	AGPAT5	Q9NUQ2	364 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	TACC3	Q9Y6A5	838 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	PLEKHA8P1	O95397	391 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	RARS2	Q5T160	578 aa	Known RBP	11.47	□□□□□ -0.57
POLE-210	ENST00000537064	MCF2L2	Q86YR7	1114 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	ABTB1	Q969K4	478 aa	Predicted RBP	11.47	□□□□□ -0.57
POLE-210	ENST00000537064	ARFIP2	P53365	341 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	COASY	Q13057	564 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	TGFBRAP1	Q8WUH2	860 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	PAPOLB	Q9NRJ5	636 aa	Known RBP	11.47	□□□□□ -0.57
POLE-210	ENST00000537064	TRIM10	Q9UDY6	481 aa		11.47	□□□□□ -0.57
POLE-210	ENST00000537064	MGEA5	O60502	916 aa		11.46	□□□□□ -0.57
POLE-210	ENST00000537064	TTLL1	O95922	423 aa		11.46	□□□□□ -0.57
POLE-210	ENST00000537064	DMP1	Q13316	513 aa	Predicted RBP	11.46	□□□□□ -0.57
POLE-210	ENST00000537064	SNX1	Q13596	522 aa		11.46	□□□□□ -0.57
POLE-210	ENST00000537064	ODR4	Q5SWX8	454 aa		11.46	□□□□□ -0.57
POLE-210	ENST00000537064	CCDC87	Q9NVE4	849 aa		11.46	□□□□□ -0.57
POLE-210	ENST00000537064	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	11.46	□□□□□ -0.57
POLE-210	ENST00000537064	SYF2	O95926	243 aa	Known RBP	11.46	□□□□□ -0.57
POLE-210	ENST00000537064	RXFP1	Q9HBX9	757 aa		11.46	□□□□□ -0.57
POLE-210	ENST00000537064	TRIM33	Q9UPN9	1127 aa		11.46	□□□□□ -0.57
POLE-210	ENST00000537064	SLC1A1	P43005	524 aa		11.46	□□□□□ -0.57
POLE-210	ENST00000537064	YWHAG	P61981	247 aa	Known RBP eCLIP	11.46	□□□□□ -0.57
POLE-210	ENST00000537064	LRRC41	Q15345	812 aa		11.46	□□□□□ -0.57
POLE-210	ENST00000537064	KNOP1	Q1ED39	458 aa	Known RBP	11.46	□□□□□ -0.57
POLE-210	ENST00000537064	EIF2A	Q9BY44	585 aa	Known RBP	11.46	□□□□□ -0.57
POLE-210	ENST00000537064	HSPA8	P11142	646 aa	Known RBP	11.46	□□□□□ -0.57
POLE-210	ENST00000537064	CASP1	P29466	404 aa		11.46	□□□□□ -0.57
POLE-210	ENST00000537064	IL6ST	P40189	918 aa	Predicted RBP	11.46	□□□□□ -0.57
POLE-210	ENST00000537064	CHRND	Q07001	517 aa		11.46	□□□□□ -0.57
POLE-210	ENST00000537064	TRIM28	Q13263	835 aa	Known RBP	11.46	□□□□□ -0.57
POLE-210	ENST00000537064	MS4A14	Q96JA4	679 aa		11.46	□□□□□ -0.57
POLE-210	ENST00000537064	CNOT7	Q9UIV1	285 aa	Known RBP	11.46	□□□□□ -0.57
POLE-210	ENST00000537064	ITGB1BP2	Q9UKP3	347 aa		11.46	□□□□□ -0.57
POLE-210	ENST00000537064	MTO1	Q9Y2Z2	717 aa	Known RBP	11.46	□□□□□ -0.57
POLE-210	ENST00000537064	TTC4	O95801	387 aa		11.46	□□□□□ -0.58
POLE-210	ENST00000537064	SOX5	P35711	763 aa		11.46	□□□□□ -0.58
POLE-210	ENST00000537064	PPP2R5C	Q13362	524 aa		11.46	□□□□□ -0.58
POLE-210	ENST00000537064	CYLC2	Q14093	348 aa	Predicted RBP	11.46	□□□□□ -0.58
POLE-210	ENST00000537064	TBC1D9B	Q66K14	1250 aa		11.46	□□□□□ -0.58
POLE-210	ENST00000537064	FUK	Q8N0W3	1084 aa		11.46	□□□□□ -0.58
POLE-210	ENST00000537064	SMAP	O00193	183 aa		11.46	□□□□□ -0.58
POLE-210	ENST00000537064	CEBPA	P49715	358 aa	Predicted RBP	11.46	□□□□□ -0.58
POLE-210	ENST00000537064	AP3B2	Q13367	1082 aa		11.46	□□□□□ -0.58
POLE-210	ENST00000537064	GRM4	Q14833	912 aa		11.46	□□□□□ -0.58
POLE-210	ENST00000537064	CASC4	Q6P4E1	433 aa		11.46	□□□□□ -0.58
POLE-210	ENST00000537064	CCT6B	Q92526	530 aa		11.46	□□□□□ -0.58
POLE-210	ENST00000537064	MAML1	Q92585	1016 aa		11.46	□□□□□ -0.58
POLE-210	ENST00000537064	ARL8A	Q96BM9	186 aa		11.46	□□□□□ -0.58
POLE-210	ENST00000537064	SDCCAG3	Q96C92	435 aa		11.46	□□□□□ -0.58
POLE-210	ENST00000537064	CCDC17	Q96LX7	622 aa		11.46	□□□□□ -0.58
POLE-210	ENST00000537064	TRIM15	Q9C019	465 aa		11.46	□□□□□ -0.58
POLE-210	ENST00000537064	NPHP4	O75161	1426 aa	Predicted RBP	11.46	□□□□□ -0.58
POLE-210	ENST00000537064		A0A0A6YYK5	440 aa	Predicted RBP	11.46	□□□□□ -0.58
POLE-210	ENST00000537064	LRRC10B	A6NIK2	292 aa		11.46	□□□□□ -0.58
POLE-210	ENST00000537064	NR3C1	P04150	777 aa		11.46	□□□□□ -0.58
POLE-210	ENST00000537064	TMOD1	P28289	359 aa		11.46	□□□□□ -0.58
POLE-210	ENST00000537064	TRIML2	Q8N7C3	387 aa		11.46	□□□□□ -0.58
POLE-210	ENST00000537064	KCNV2	Q8TDN2	545 aa		11.46	□□□□□ -0.58
POLE-210	ENST00000537064	TRAPPC3	O43617	180 aa		11.45	□□□□□ -0.58
POLE-210	ENST00000537064	RASGRF1	Q13972	1273 aa		11.45	□□□□□ -0.58
POLE-210	ENST00000537064	GEN1	Q17RS7	908 aa		11.45	□□□□□ -0.58
POLE-210	ENST00000537064	GRAMD1B	Q3KR37	738 aa		11.45	□□□□□ -0.58
POLE-210	ENST00000537064	CASKIN2	Q8WXE0	1202 aa		11.45	□□□□□ -0.58
POLE-210	ENST00000537064	TEKT3	Q9BXF9	490 aa		11.45	□□□□□ -0.58
POLE-210	ENST00000537064	WWP1	Q9H0M0	922 aa		11.45	□□□□□ -0.58
POLE-210	ENST00000537064	APOBEC2	Q9Y235	224 aa	Known RBP	11.45	□□□□□ -0.58
POLE-210	ENST00000537064	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	11.45	□□□□□ -0.58
POLE-210	ENST00000537064		A0A0G2JND7	137 aa		11.45	□□□□□ -0.58
POLE-210	ENST00000537064	KRT38	O76015	456 aa		11.45	□□□□□ -0.58
POLE-210	ENST00000537064	HARS	P12081	509 aa	Known RBP	11.45	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms