RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 MFSD5Q6N075 450 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 NFRKBQ6P4R8 1299 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 KCNV1Q6PIU1 500 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 ARHGEF18Q6ZSZ5 1173 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 CYFIP1Q7L576 1253 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 SLFN11Q7Z7L1 901 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 SLFN12Q8IYM2 578 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 ZNF34Q8IZ26 560 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 REXO1Q8N1G1 1221 aaKnown RBP6.31□□□□□ -1.4
CHD4-206ENST00000536999 ARHGAP18Q8N392 663 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 LCORLQ8N3X6 602 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 RIBC1Q8N443 379 aaPredicted RBP6.31□□□□□ -1.4
CHD4-206ENST00000536999 SRBD1Q8N5C6 995 aaKnown RBP6.31□□□□□ -1.4
CHD4-206ENST00000536999 PNMA1Q8ND90 353 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 WDR66Q8TBY9 1149 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 CD99L2Q8TCZ2 262 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 UBLCP1Q8WVY7 318 aaPredicted RBP6.31□□□□□ -1.4
CHD4-206ENST00000536999 ATXN2LQ8WWM7 1075 aaKnown RBP6.31□□□□□ -1.4
CHD4-206ENST00000536999 CTNNBL1Q8WYA6 563 aaPredicted RBP6.31□□□□□ -1.4
CHD4-206ENST00000536999 RIN2Q8WYP3 895 aaPredicted RBP6.31□□□□□ -1.4
CHD4-206ENST00000536999 CCT6BQ92526 530 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 KAT2BQ92831 832 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 RPGRQ92834 1020 aaKnown RBP6.31□□□□□ -1.4
CHD4-206ENST00000536999 ARL8AQ96BM9 186 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 TBC1D31Q96DN5 1066 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 KIF12Q96FN5 646 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 SNX27Q96L92 541 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 INPP4AQ96PE3 977 aaPredicted RBP6.31□□□□□ -1.4
CHD4-206ENST00000536999 MTRQ99707 1265 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.31□□□□□ -1.4
CHD4-206ENST00000536999 EBF2Q9HAK2 575 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 FAM207AQ9NSI2 230 aaPredicted RBP6.31□□□□□ -1.4
CHD4-206ENST00000536999 TXLNGQ9NUQ3 528 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 INTS9Q9NV88 658 aaKnown RBP6.31□□□□□ -1.4
CHD4-206ENST00000536999 BSDC1Q9NW68 430 aaPredicted RBP6.31□□□□□ -1.4
CHD4-206ENST00000536999 GGA3Q9NZ52 723 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 SENP1Q9P0U3 644 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 CTTNBP2NLQ9P2B4 639 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 CPSF2Q9P2I0 782 aaKnown RBP6.31□□□□□ -1.4
CHD4-206ENST00000536999 LARSQ9P2J5 1176 aaKnown RBP6.31□□□□□ -1.4
CHD4-206ENST00000536999 SLC12A6Q9UHW9 1150 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.31□□□□□ -1.4
CHD4-206ENST00000536999 SAMM50Q9Y512 469 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 ACTL7BQ9Y614 415 aa6.31□□□□□ -1.4
CHD4-206ENST00000536999 RPTORQ8N122 1335 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 PIEZO1Q92508 2521 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 PPEF1O14829 653 aaPredicted RBP6.3□□□□□ -1.4
CHD4-206ENST00000536999 ZNF185O15231 689 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 CEP104O60308 925 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 CCNT1O60563 726 aaKnown RBP6.3□□□□□ -1.4
CHD4-206ENST00000536999 CTNND1O60716 968 aaKnown RBP6.3□□□□□ -1.4
CHD4-206ENST00000536999 ZMYND10O75800 440 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 GLI1P08151 1106 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 GSTA2P09210 222 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 TSPY3P0CV98 308 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 TSPY8P0CW00 308 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 XRCC5P13010 732 aaKnown RBP6.3□□□□□ -1.4
CHD4-206ENST00000536999 RARGP13631 454 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 MUTP22033 750 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 CDC25AP30304 524 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 STAT1P42224 750 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 MMP13P45452 471 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 ATP1A2P50993 1020 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 SLC18A1P54219 525 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 PTENP60484 403 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 MRPS35P82673 323 aaKnown RBP6.3□□□□□ -1.4
CHD4-206ENST00000536999 SLC7A5Q01650 507 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 EHHADHQ08426 723 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 NPY5RQ15761 445 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 NFIL3Q16649 462 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 SKIDA1Q1XH10 827 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 TSNAXIP1Q2TAA8 658 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 HYIQ5T013 277 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 MOXD1Q6UVY6 613 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 TRPM8Q7Z2W7 1104 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 PIGWQ7Z7B1 504 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 ANKRD35Q8N283 1001 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 SUPT20HQ8NEM7 779 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 GRK7Q8WTQ7 553 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 DYDC1Q8WWB3 177 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 BAP1Q92560 729 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 RAD54LQ92698 747 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 TLCD1Q96CP7 247 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 DTNBP1Q96EV8 351 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 MS4A3Q96HJ5 214 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 SCLT1Q96NL6 688 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 SERPINB12Q96P63 405 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 XPO6Q96QU8 1125 aaKnown RBP6.3□□□□□ -1.4
CHD4-206ENST00000536999 RPS6KC1Q96S38 1066 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 ZKSCAN3Q9BRR0 538 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 RIOK1Q9BRS2 568 aaKnown RBP6.3□□□□□ -1.4
CHD4-206ENST00000536999 ERP44Q9BS26 406 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 MKNK1Q9BUB5 465 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 NYXQ9GZU5 481 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 VPS33BQ9H267 617 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 UBN1Q9NPG3 1134 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 KLHL14Q9P2G3 628 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 TRIM10Q9UDY6 481 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 ARMCX3Q9UH62 379 aaPredicted RBP6.3□□□□□ -1.4
CHD4-206ENST00000536999 CORO1CQ9ULV4 474 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms