RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 TMEM60Q9H2L4 133 aa16.9■□□□□ 0.3
CHFR-213ENST00000536843 NLRC4Q9NPP4 1024 aa16.9■□□□□ 0.3
CHFR-213ENST00000536843 GGA1Q9UJY5 639 aa16.9■□□□□ 0.3
CHFR-213ENST00000536843 STK38LQ9Y2H1 464 aa16.9■□□□□ 0.3
CHFR-213ENST00000536843 MYH1P12882 1939 aa16.9■□□□□ 0.3
CHFR-213ENST00000536843 PALM3A6NDB9 673 aaPredicted RBP16.89■□□□□ 0.29
CHFR-213ENST00000536843 LAD1O00515 517 aa16.89■□□□□ 0.29
CHFR-213ENST00000536843 RGS16O15492 202 aaPredicted RBP16.89■□□□□ 0.29
CHFR-213ENST00000536843 HIP1RO75146 1068 aa16.89■□□□□ 0.29
CHFR-213ENST00000536843 GJB6O95452 261 aa16.89■□□□□ 0.29
CHFR-213ENST00000536843 ITGA4P13612 1032 aa16.89■□□□□ 0.29
CHFR-213ENST00000536843 CCNB1P14635 433 aa16.89■□□□□ 0.29
CHFR-213ENST00000536843 ADRA2BP18089 450 aa16.89■□□□□ 0.29
CHFR-213ENST00000536843 ATP6V1C1P21283 382 aa16.89■□□□□ 0.29
CHFR-213ENST00000536843 CDK8P49336 464 aa16.89■□□□□ 0.29
CHFR-213ENST00000536843 PSMD2Q13200 908 aa16.89■□□□□ 0.29
CHFR-213ENST00000536843 RPUSD2Q8IZ73 545 aaKnown RBP16.89■□□□□ 0.29
CHFR-213ENST00000536843 TBC1D16Q8TBP0 767 aa16.89■□□□□ 0.29
CHFR-213ENST00000536843 EZH1Q92800 747 aaPredicted RBP16.89■□□□□ 0.29
CHFR-213ENST00000536843 CPVLQ9H3G5 476 aa16.89■□□□□ 0.29
CHFR-213ENST00000536843 CCDC194A0A1B0GVG4 234 aa16.89■□□□□ 0.29
CHFR-213ENST00000536843 IL1R1P14778 569 aa16.89■□□□□ 0.29
CHFR-213ENST00000536843 ALDH3A1P30838 453 aa16.89■□□□□ 0.29
CHFR-213ENST00000536843 GBP1P32455 592 aa16.89■□□□□ 0.29
CHFR-213ENST00000536843 AMPD3Q01432 767 aa16.89■□□□□ 0.29
CHFR-213ENST00000536843 LRRC63Q05C16 580 aa16.89■□□□□ 0.29
CHFR-213ENST00000536843 CNGA2Q16280 664 aa16.89■□□□□ 0.29
CHFR-213ENST00000536843 CRY2Q49AN0 593 aa16.89■□□□□ 0.29
CHFR-213ENST00000536843 LRRC55Q6ZSA7 311 aa16.89■□□□□ 0.29
CHFR-213ENST00000536843 RBM17Q96I25 401 aaKnown RBP16.89■□□□□ 0.29
CHFR-213ENST00000536843 ZMYND12Q9H0C1 365 aa16.89■□□□□ 0.29
CHFR-213ENST00000536843 DPH5Q9H2P9 285 aa16.89■□□□□ 0.29
CHFR-213ENST00000536843 RXFP1Q9HBX9 757 aa16.89■□□□□ 0.29
CHFR-213ENST00000536843 WDR35Q9P2L0 1181 aa16.89■□□□□ 0.29
CHFR-213ENST00000536843 CD2APQ9Y5K6 639 aa16.89■□□□□ 0.29
CHFR-213ENST00000536843 SPDYE5A6NIY4 337 aa16.88■□□□□ 0.29
CHFR-213ENST00000536843 INF2Q27J81 1249 aa16.88■□□□□ 0.29
CHFR-213ENST00000536843 TNFAIP8L3Q5GJ75 292 aa16.88■□□□□ 0.29
CHFR-213ENST00000536843 C6orf118Q5T5N4 469 aa16.88■□□□□ 0.29
CHFR-213ENST00000536843 DENND2CQ68D51 928 aa16.88■□□□□ 0.29
CHFR-213ENST00000536843 POTEAQ6S8J7 498 aa16.88■□□□□ 0.29
CHFR-213ENST00000536843 KCNV2Q8TDN2 545 aa16.88■□□□□ 0.29
CHFR-213ENST00000536843 AK8Q96MA6 479 aa16.88■□□□□ 0.29
CHFR-213ENST00000536843 EYA3Q99504 573 aa16.88■□□□□ 0.29
CHFR-213ENST00000536843 TMEM109Q9BVC6 243 aa16.88■□□□□ 0.29
CHFR-213ENST00000536843 AZI2Q9H6S1 392 aa16.88■□□□□ 0.29
CHFR-213ENST00000536843 ZDHHC18Q9NUE0 388 aa16.88■□□□□ 0.29
CHFR-213ENST00000536843 AIPL1Q9NZN9 384 aa16.88■□□□□ 0.29
CHFR-213ENST00000536843 CTNNAL1Q9UBT7 734 aa16.88■□□□□ 0.29
CHFR-213ENST00000536843 PLSCR1O15162 318 aa16.88■□□□□ 0.29
CHFR-213ENST00000536843 RNF8O76064 485 aa16.88■□□□□ 0.29
CHFR-213ENST00000536843 PMS2P54278 862 aa16.88■□□□□ 0.29
CHFR-213ENST00000536843 IFI35P80217 286 aaPredicted RBP16.88■□□□□ 0.29
CHFR-213ENST00000536843 TRIM68Q6AZZ1 485 aa16.88■□□□□ 0.29
CHFR-213ENST00000536843 FOXR2Q6PJQ5 311 aa16.88■□□□□ 0.29
CHFR-213ENST00000536843 APBB1IPQ7Z5R6 666 aaPredicted RBP16.88■□□□□ 0.29
CHFR-213ENST00000536843 CABP7Q86V35 215 aa16.88■□□□□ 0.29
CHFR-213ENST00000536843 GUF1Q8N442 669 aaKnown RBP16.88■□□□□ 0.29
CHFR-213ENST00000536843 RAB3IPQ96QF0 476 aaPredicted RBP16.88■□□□□ 0.29
CHFR-213ENST00000536843 RNPEPL1Q9HAU8 725 aa16.88■□□□□ 0.29
CHFR-213ENST00000536843 BARHL2Q9NY43 387 aa16.88■□□□□ 0.29
CHFR-213ENST00000536843 POLLQ9UGP5 575 aa16.88■□□□□ 0.29
CHFR-213ENST00000536843 ADAMTS1Q9UHI8 967 aa16.88■□□□□ 0.29
CHFR-213ENST00000536843 GGT7Q9UJ14 662 aa16.88■□□□□ 0.29
CHFR-213ENST00000536843 ARL2BPQ9Y2Y0 163 aa16.88■□□□□ 0.29
CHFR-213ENST00000536843 KLRF2D3W0D1 207 aa16.87■□□□□ 0.29
CHFR-213ENST00000536843 TUBP50607 506 aa16.87■□□□□ 0.29
CHFR-213ENST00000536843 PDIA5Q14554 519 aa16.87■□□□□ 0.29
CHFR-213ENST00000536843 PPP1R15BQ5SWA1 713 aa16.87■□□□□ 0.29
CHFR-213ENST00000536843 C16orf86Q6ZW13 317 aa16.87■□□□□ 0.29
CHFR-213ENST00000536843 FBF1Q8TES7 1133 aa16.87■□□□□ 0.29
CHFR-213ENST00000536843 GORASP1Q9BQQ3 440 aa16.87■□□□□ 0.29
CHFR-213ENST00000536843 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.87■□□□□ 0.29
CHFR-213ENST00000536843 CELF4Q9BZC1 486 aaKnown RBP16.87■□□□□ 0.29
CHFR-213ENST00000536843 STMN4Q9H169 189 aaPredicted RBP16.87■□□□□ 0.29
CHFR-213ENST00000536843 CNOT7Q9UIV1 285 aaKnown RBP16.87■□□□□ 0.29
CHFR-213ENST00000536843 C2CD2Q9Y426 696 aa16.87■□□□□ 0.29
CHFR-213ENST00000536843 UPP2O95045 317 aa16.87■□□□□ 0.29
CHFR-213ENST00000536843 CALB2P22676 271 aa16.87■□□□□ 0.29
CHFR-213ENST00000536843 RHBDL3P58872 404 aa16.87■□□□□ 0.29
CHFR-213ENST00000536843 KLHL30Q0D2K2 578 aa16.87■□□□□ 0.29
CHFR-213ENST00000536843 ADAM9Q13443 819 aa16.87■□□□□ 0.29
CHFR-213ENST00000536843 TXNRD1Q16881 649 aa16.87■□□□□ 0.29
CHFR-213ENST00000536843 MFSD14BQ5SR56 506 aa16.87■□□□□ 0.29
CHFR-213ENST00000536843 NUGGCQ68CJ6 796 aa16.87■□□□□ 0.29
CHFR-213ENST00000536843 BTNL9Q6UXG8 535 aa16.87■□□□□ 0.29
CHFR-213ENST00000536843 DAGLBQ8NCG7 672 aa16.87■□□□□ 0.29
CHFR-213ENST00000536843 HPS3Q969F9 1004 aa16.87■□□□□ 0.29
CHFR-213ENST00000536843 RNF25Q96BH1 459 aaPredicted RBP16.87■□□□□ 0.29
CHFR-213ENST00000536843 EPAS1Q99814 870 aa16.87■□□□□ 0.29
CHFR-213ENST00000536843 SYT15Q9BQS2 421 aa16.87■□□□□ 0.29
CHFR-213ENST00000536843 MAP3K13O43283 966 aa16.86■□□□□ 0.29
CHFR-213ENST00000536843 IFNAR2P48551 515 aa16.86■□□□□ 0.29
CHFR-213ENST00000536843 SLFN11Q7Z7L1 901 aa16.86■□□□□ 0.29
CHFR-213ENST00000536843 FITM2Q8N6M3 262 aa16.86■□□□□ 0.29
CHFR-213ENST00000536843 NEDD1Q8NHV4 660 aa16.86■□□□□ 0.29
CHFR-213ENST00000536843 B4GALNT2Q8NHY0 566 aa16.86■□□□□ 0.29
CHFR-213ENST00000536843 BICD1Q96G01 975 aa16.86■□□□□ 0.29
CHFR-213ENST00000536843 TRIM7Q9C029 511 aa16.86■□□□□ 0.29
CHFR-213ENST00000536843 PIDD1Q9HB75 910 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms