RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 COG5Q9UP83 839 aa8.38□□□□□ -1.07
CCDC60-203ENST00000536742 ZNF281Q9Y2X9 895 aa8.38□□□□□ -1.07
CCDC60-203ENST00000536742 PCDHA11Q9Y5I1 949 aa8.38□□□□□ -1.07
CCDC60-203ENST00000536742 XIRP2A4UGR9 3374 aa8.38□□□□□ -1.07
CCDC60-203ENST00000536742 H0Y8X5 98 aa8.37□□□□□ -1.07
CCDC60-203ENST00000536742 HMGCRP04035 888 aa8.37□□□□□ -1.07
CCDC60-203ENST00000536742 SYPP08247 313 aa8.37□□□□□ -1.07
CCDC60-203ENST00000536742 SNRPA1P09661 255 aaKnown RBP8.37□□□□□ -1.07
CCDC60-203ENST00000536742 GPSM2P81274 684 aa8.37□□□□□ -1.07
CCDC60-203ENST00000536742 TEKQ02763 1124 aa8.37□□□□□ -1.07
CCDC60-203ENST00000536742 DUSP4Q13115 394 aa8.37□□□□□ -1.07
CCDC60-203ENST00000536742 HSP90AA2PQ14568 343 aaPredicted RBP8.37□□□□□ -1.07
CCDC60-203ENST00000536742 BMS1Q14692 1282 aaKnown RBP8.37□□□□□ -1.07
CCDC60-203ENST00000536742 ATG4DQ86TL0 474 aaPredicted RBP8.37□□□□□ -1.07
CCDC60-203ENST00000536742 ZNF227Q86WZ6 799 aa8.37□□□□□ -1.07
CCDC60-203ENST00000536742 ZNF34Q8IZ26 560 aa8.37□□□□□ -1.07
CCDC60-203ENST00000536742 PPP1R14AQ96A00 147 aa8.37□□□□□ -1.07
CCDC60-203ENST00000536742 CARS2Q9HA77 564 aaKnown RBP8.37□□□□□ -1.07
CCDC60-203ENST00000536742 ZMYM5Q9UJ78 669 aa8.37□□□□□ -1.07
CCDC60-203ENST00000536742 LTBP2Q14767 1821 aa8.37□□□□□ -1.07
CCDC60-203ENST00000536742 MAP3K15Q6ZN16 1313 aa8.36□□□□□ -1.07
CCDC60-203ENST00000536742 BTBD11A6QL63 1104 aa8.36□□□□□ -1.07
CCDC60-203ENST00000536742 TNPO2O14787 897 aaKnown RBP8.36□□□□□ -1.07
CCDC60-203ENST00000536742 ITGAVP06756 1048 aa8.36□□□□□ -1.07
CCDC60-203ENST00000536742 RNASE1P07998 156 aaKnown RBP8.36□□□□□ -1.07
CCDC60-203ENST00000536742 SSRP1Q08945 709 aaKnown RBP8.36□□□□□ -1.07
CCDC60-203ENST00000536742 PPP2R5DQ14738 602 aa8.36□□□□□ -1.07
CCDC60-203ENST00000536742 OGFOD2Q6N063 350 aa8.36□□□□□ -1.07
CCDC60-203ENST00000536742 CRTC3Q6UUV7 619 aa8.36□□□□□ -1.07
CCDC60-203ENST00000536742 KIF6Q6ZMV9 814 aa8.36□□□□□ -1.07
CCDC60-203ENST00000536742 ANKRD23Q86SG2 305 aa8.36□□□□□ -1.07
CCDC60-203ENST00000536742 ZDHHC15Q96MV8 337 aa8.36□□□□□ -1.07
CCDC60-203ENST00000536742 ALPK1Q96QP1 1244 aa8.36□□□□□ -1.07
CCDC60-203ENST00000536742 UTP14AQ9BVJ6 771 aaKnown RBP8.36□□□□□ -1.07
CCDC60-203ENST00000536742 SPATA9Q9BWV2 254 aa8.36□□□□□ -1.07
CCDC60-203ENST00000536742 CARD11Q9BXL7 1154 aa8.36□□□□□ -1.07
CCDC60-203ENST00000536742 MBNL3Q9NUK0 354 aaKnown RBP8.36□□□□□ -1.07
CCDC60-203ENST00000536742 ZFHX4Q86UP3 3567 aa8.36□□□□□ -1.07
CCDC60-203ENST00000536742 ZNF804BA4D1E1 1349 aa8.35□□□□□ -1.07
CCDC60-203ENST00000536742 LRRC37A2A6NM11 1700 aa8.35□□□□□ -1.07
CCDC60-203ENST00000536742 TRBV23OR9-2A0A075B6M9 112 aa8.35□□□□□ -1.07
CCDC60-203ENST00000536742 FAM221BA6H8Z2 402 aa8.35□□□□□ -1.07
CCDC60-203ENST00000536742 MEIS1O00470 390 aa8.35□□□□□ -1.07
CCDC60-203ENST00000536742 MYO1BO43795 1136 aa8.35□□□□□ -1.07
CCDC60-203ENST00000536742 PAPLNO95428 1278 aa8.35□□□□□ -1.07
CCDC60-203ENST00000536742 CPP00450 1065 aa8.35□□□□□ -1.07
CCDC60-203ENST00000536742 HOXC12P31275 282 aa8.35□□□□□ -1.07
CCDC60-203ENST00000536742 VGLL4Q14135 290 aa8.35□□□□□ -1.07
CCDC60-203ENST00000536742 EEF1DP3Q658K8 133 aa8.35□□□□□ -1.07
CCDC60-203ENST00000536742 RCSD1Q6JBY9 416 aa8.35□□□□□ -1.07
CCDC60-203ENST00000536742 BADQ92934 168 aa8.35□□□□□ -1.07
CCDC60-203ENST00000536742 ZBED3Q96IU2 234 aaPredicted RBP8.35□□□□□ -1.07
CCDC60-203ENST00000536742 SLC12A9Q9BXP2 914 aa8.35□□□□□ -1.07
CCDC60-203ENST00000536742 FOXP3Q9BZS1 431 aa8.35□□□□□ -1.07
CCDC60-203ENST00000536742 NKX2-4Q9H2Z4 354 aa8.35□□□□□ -1.07
CCDC60-203ENST00000536742 CWC22Q9HCG8 908 aaKnown RBP8.35□□□□□ -1.07
CCDC60-203ENST00000536742 CYP26B1Q9NR63 512 aa8.35□□□□□ -1.07
CCDC60-203ENST00000536742 OTOFQ9HC10 1997 aa8.35□□□□□ -1.07
CCDC60-203ENST00000536742 CHD6Q8TD26 2715 aa8.34□□□□□ -1.07
CCDC60-203ENST00000536742 CCDC163A0A0D9SF12 145 aa8.34□□□□□ -1.07
CCDC60-203ENST00000536742 A0A1W2PQU0 124 aa8.34□□□□□ -1.07
CCDC60-203ENST00000536742 WASH4PA8MWX3 477 aa8.34□□□□□ -1.07
CCDC60-203ENST00000536742 PDHXO00330 501 aa8.34□□□□□ -1.07
CCDC60-203ENST00000536742 AURKAO14965 403 aa8.34□□□□□ -1.07
CCDC60-203ENST00000536742 CAPNS1P04632 268 aa8.34□□□□□ -1.07
CCDC60-203ENST00000536742 SCG5P05408 212 aa8.34□□□□□ -1.07
CCDC60-203ENST00000536742 GTF2IRD2BQ6EKJ0 949 aa8.34□□□□□ -1.07
CCDC60-203ENST00000536742 CYP2R1Q6VVX0 501 aa8.34□□□□□ -1.07
CCDC60-203ENST00000536742 GTF2IRD2Q86UP8 949 aa8.34□□□□□ -1.07
CCDC60-203ENST00000536742 ERO1BQ86YB8 467 aa8.34□□□□□ -1.07
CCDC60-203ENST00000536742 THAP3Q8WTV1 239 aaPredicted RBP8.34□□□□□ -1.07
CCDC60-203ENST00000536742 COA7Q96BR5 231 aa8.34□□□□□ -1.07
CCDC60-203ENST00000536742 FCRL2Q96LA5 508 aaPredicted RBP8.34□□□□□ -1.07
CCDC60-203ENST00000536742 PARK7Q99497 189 aaKnown RBP8.34□□□□□ -1.07
CCDC60-203ENST00000536742 AARSD1Q9BTE6 412 aaKnown RBP8.34□□□□□ -1.07
CCDC60-203ENST00000536742 IRF2BPLQ9H1B7 796 aa8.34□□□□□ -1.07
CCDC60-203ENST00000536742 ADAMTS6Q9UKP5 1117 aa8.34□□□□□ -1.07
CCDC60-203ENST00000536742 MINPP1Q9UNW1 487 aa8.34□□□□□ -1.07
CCDC60-203ENST00000536742 BACE2Q9Y5Z0 518 aa8.34□□□□□ -1.07
CCDC60-203ENST00000536742 MAST2Q6P0Q8 1798 aa8.34□□□□□ -1.07
CCDC60-203ENST00000536742 ZNF318Q5VUA4 2279 aa8.34□□□□□ -1.07
CCDC60-203ENST00000536742 ZFHX2Q9C0A1 2572 aaPredicted RBP8.34□□□□□ -1.07
CCDC60-203ENST00000536742 MYO9BQ13459 2157 aa8.34□□□□□ -1.08
CCDC60-203ENST00000536742 PTPRZ1P23471 2315 aaPredicted RBP8.34□□□□□ -1.08
CCDC60-203ENST00000536742 DCHS1Q96JQ0 3298 aa8.33□□□□□ -1.08
CCDC60-203ENST00000536742 UFL1O94874 794 aa8.33□□□□□ -1.08
CCDC60-203ENST00000536742 KCNH1O95259 989 aa8.33□□□□□ -1.08
CCDC60-203ENST00000536742 FGFR1P11362 822 aa8.33□□□□□ -1.08
CCDC60-203ENST00000536742 PPP2R2AP63151 447 aa8.33□□□□□ -1.08
CCDC60-203ENST00000536742 DACT2Q5SW24 774 aa8.33□□□□□ -1.08
CCDC60-203ENST00000536742 SPATC1Q76KD6 591 aa8.33□□□□□ -1.08
CCDC60-203ENST00000536742 POU5F2Q8N7G0 328 aa8.33□□□□□ -1.08
CCDC60-203ENST00000536742 ZKSCAN4Q969J2 545 aaPredicted RBP8.33□□□□□ -1.08
CCDC60-203ENST00000536742 DNAJC7Q99615 494 aa8.33□□□□□ -1.08
CCDC60-203ENST00000536742 TMEM59LQ9UK28 342 aa8.33□□□□□ -1.08
CCDC60-203ENST00000536742 DNAH12Q6ZR08 3092 aa8.33□□□□□ -1.08
CCDC60-203ENST00000536742 UNC79Q9P2D8 2635 aa8.33□□□□□ -1.08
CCDC60-203ENST00000536742 TRAV20A0A0B4J274 112 aa8.32□□□□□ -1.08
CCDC60-203ENST00000536742 MED19A0JLT2 244 aaPredicted RBP8.32□□□□□ -1.08
CCDC60-203ENST00000536742 CD3EP07766 207 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms