RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 CCDC42Q96M95 316 aa8.97□□□□□ -0.97
ABCA4-207ENST00000536513 KCNMB3Q9NPA1 279 aa8.97□□□□□ -0.97
ABCA4-207ENST00000536513 AKT3Q9Y243 479 aa8.97□□□□□ -0.97
ABCA4-207ENST00000536513 DDX60LQ5H9U9 1706 aaKnown RBP8.97□□□□□ -0.97
ABCA4-207ENST00000536513 PLIN4Q96Q06 1357 aa8.97□□□□□ -0.97
ABCA4-207ENST00000536513 BTBD19C9JJ37 291 aa8.97□□□□□ -0.97
ABCA4-207ENST00000536513 KLRC4O43908 158 aa8.97□□□□□ -0.97
ABCA4-207ENST00000536513 TUBB4AP04350 444 aa8.97□□□□□ -0.97
ABCA4-207ENST00000536513 KRT19P08727 400 aa8.97□□□□□ -0.97
ABCA4-207ENST00000536513 EPB41P11171 864 aaKnown RBP8.97□□□□□ -0.97
ABCA4-207ENST00000536513 XRCC5P13010 732 aaKnown RBP8.97□□□□□ -0.97
ABCA4-207ENST00000536513 GBP2P32456 591 aaPredicted RBP8.97□□□□□ -0.97
ABCA4-207ENST00000536513 SARSP49591 514 aaKnown RBP8.97□□□□□ -0.97
ABCA4-207ENST00000536513 ACOT2P49753 483 aa8.97□□□□□ -0.97
ABCA4-207ENST00000536513 SMTNP53814 917 aa8.97□□□□□ -0.97
ABCA4-207ENST00000536513 GIT2Q14161 759 aa8.97□□□□□ -0.97
ABCA4-207ENST00000536513 PPP2R5AQ15172 486 aa8.97□□□□□ -0.97
ABCA4-207ENST00000536513 CYP4F22Q6NT55 531 aa8.97□□□□□ -0.97
ABCA4-207ENST00000536513 APBB1IPQ7Z5R6 666 aaPredicted RBP8.97□□□□□ -0.97
ABCA4-207ENST00000536513 FAM114A1Q8IWE2 563 aa8.97□□□□□ -0.97
ABCA4-207ENST00000536513 GIMAP8Q8ND71 665 aaPredicted RBP8.97□□□□□ -0.97
ABCA4-207ENST00000536513 DEPTORQ8TB45 409 aa8.97□□□□□ -0.97
ABCA4-207ENST00000536513 AFAP1L1Q8TED9 768 aa8.97□□□□□ -0.97
ABCA4-207ENST00000536513 INTS13Q9NVM9 706 aa8.97□□□□□ -0.97
ABCA4-207ENST00000536513 TRIM10Q9UDY6 481 aa8.97□□□□□ -0.97
ABCA4-207ENST00000536513 PLEKP08567 350 aaPredicted RBP8.96□□□□□ -0.97
ABCA4-207ENST00000536513 KRT13P13646 458 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 ABCB4P21439 1286 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 TCF7P36402 384 aaPredicted RBP8.96□□□□□ -0.97
ABCA4-207ENST00000536513 ADCYAP1R1P41586 468 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 SSR1P43307 286 aaKnown RBP8.96□□□□□ -0.97
ABCA4-207ENST00000536513 FKBP3Q00688 224 aaKnown RBP8.96□□□□□ -0.97
ABCA4-207ENST00000536513 HSDL1Q3SXM5 330 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 ARSHQ5FYA8 562 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 SRLQ86TD4 932 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 MTMR8Q96EF0 704 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 IFT74Q96LB3 600 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 NCAPGQ9BPX3 1015 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 NDST4Q9H3R1 872 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 AGO4Q9HCK5 861 aaKnown RBP8.96□□□□□ -0.97
ABCA4-207ENST00000536513 DOCK2Q92608 1830 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 IGLV3-22A0A075B6J6 115 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 FRMD3A2A2Y4 597 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 TMEM110-MUSTN1A8MSY1 372 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 RNF225M0QZC1 329 aaPredicted RBP8.96□□□□□ -0.97
ABCA4-207ENST00000536513 BUB1O43683 1085 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 NEBLO76041 1014 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 RHOBTB3O94955 611 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 FGFR1OPO95684 399 aaKnown RBP8.96□□□□□ -0.97
ABCA4-207ENST00000536513 CCDC175P0C221 793 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 ADORA2AP29274 412 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 PLA2G4AP47712 749 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 CCT5P48643 541 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 SP2Q02086 613 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 DMP1Q13316 513 aaPredicted RBP8.96□□□□□ -0.97
ABCA4-207ENST00000536513 NAA25Q14CX7 972 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 SPA17Q15506 151 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 ZNF394Q53GI3 561 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 CCDC181Q5TID7 509 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 FASTKD5Q7L8L6 764 aaKnown RBP8.96□□□□□ -0.97
ABCA4-207ENST00000536513 PPM1KQ8N3J5 372 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 FAM133AQ8N9E0 248 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 ZSWIM2Q8NEG5 633 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 GPRC5AQ8NFJ5 357 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 MICAL1Q8TDZ2 1067 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 SCFD1Q8WVM8 642 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 EXOC4Q96A65 974 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 ZNF302Q9NR11 478 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 LCMT1Q9UIC8 334 aa8.96□□□□□ -0.97
ABCA4-207ENST00000536513 TNPO2O14787 897 aaKnown RBP8.96□□□□□ -0.98
ABCA4-207ENST00000536513 FGFR4P22455 802 aa8.96□□□□□ -0.98
ABCA4-207ENST00000536513 LIG4P49917 911 aa8.96□□□□□ -0.98
ABCA4-207ENST00000536513 STAT5BP51692 787 aa8.96□□□□□ -0.98
ABCA4-207ENST00000536513 CLCN3P51790 818 aa8.96□□□□□ -0.98
ABCA4-207ENST00000536513 MAP2K1Q02750 393 aaPredicted RBP8.96□□□□□ -0.98
ABCA4-207ENST00000536513 TTC19Q6DKK2 380 aaPredicted RBP8.96□□□□□ -0.98
ABCA4-207ENST00000536513 CEP112Q8N8E3 955 aa8.96□□□□□ -0.98
ABCA4-207ENST00000536513 PIK3R5Q8WYR1 880 aa8.96□□□□□ -0.98
ABCA4-207ENST00000536513 ATP6V0A1Q93050 837 aa8.96□□□□□ -0.98
ABCA4-207ENST00000536513 RNF25Q96BH1 459 aaPredicted RBP8.96□□□□□ -0.98
ABCA4-207ENST00000536513 ZIC5Q96T25 663 aa8.96□□□□□ -0.98
ABCA4-207ENST00000536513 JADE2Q9NQC1 790 aa8.96□□□□□ -0.98
ABCA4-207ENST00000536513 ECM29Q5VYK3 1845 aa8.96□□□□□ -0.98
ABCA4-207ENST00000536513 PSMD10O75832 226 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 TFRCP02786 760 aaKnown RBP8.95□□□□□ -0.98
ABCA4-207ENST00000536513 PSAPP07602 524 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 KRT5P13647 590 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 MAGEA9P43362 315 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 ERVK-9P63128 1117 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 ERVK-24P63145 666 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 EPHA7Q15375 998 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 OTUD6AQ7L8S5 288 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 HAUS6Q7Z4H7 955 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 SH3RF1Q7Z6J0 888 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 FAM186BQ8IYM0 893 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 C7orf25Q9BPX7 421 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 CBWD1Q9BRT8 395 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 FAM213AQ9BRX8 229 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 HSD3B7Q9H2F3 369 aa8.95□□□□□ -0.98
ABCA4-207ENST00000536513 RBPJLQ9UBG7 517 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms