RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 PTGDRQ13258 359 aa12.75□□□□□ -0.37
CHRNB1-202ENST00000536404 PKN1Q16512 942 aa12.75□□□□□ -0.37
CHRNB1-202ENST00000536404 TMEM63BQ5T3F8 832 aa12.75□□□□□ -0.37
CHRNB1-202ENST00000536404 PDXDC2PQ6P474 469 aa12.75□□□□□ -0.37
CHRNB1-202ENST00000536404 EEPD1Q7L9B9 569 aa12.75□□□□□ -0.37
CHRNB1-202ENST00000536404 ANKRD33Q7Z3H0 272 aa12.75□□□□□ -0.37
CHRNB1-202ENST00000536404 KIAA1328Q86T90 577 aa12.75□□□□□ -0.37
CHRNB1-202ENST00000536404 SLC17A8Q8NDX2 589 aa12.75□□□□□ -0.37
CHRNB1-202ENST00000536404 VTI1AQ96AJ9 217 aa12.75□□□□□ -0.37
CHRNB1-202ENST00000536404 ZKSCAN3Q9BRR0 538 aa12.75□□□□□ -0.37
CHRNB1-202ENST00000536404 VPS16Q9H269 839 aa12.75□□□□□ -0.37
CHRNB1-202ENST00000536404 SPC25Q9HBM1 224 aa12.75□□□□□ -0.37
CHRNB1-202ENST00000536404 SH3GLB2Q9NR46 395 aa12.75□□□□□ -0.37
CHRNB1-202ENST00000536404 TAB2Q9NYJ8 693 aa12.75□□□□□ -0.37
CHRNB1-202ENST00000536404 VPS54Q9P1Q0 977 aa12.75□□□□□ -0.37
CHRNB1-202ENST00000536404 A0A0C4DFX4 3053 aa12.75□□□□□ -0.37
CHRNB1-202ENST00000536404 DCDC2CA8MYV0 355 aa12.74□□□□□ -0.37
CHRNB1-202ENST00000536404 ERLIN2O94905 339 aa12.74□□□□□ -0.37
CHRNB1-202ENST00000536404 PARP1P09874 1014 aaKnown RBP12.74□□□□□ -0.37
CHRNB1-202ENST00000536404 PDHBP11177 359 aa12.74□□□□□ -0.37
CHRNB1-202ENST00000536404 KIF5BP33176 963 aa12.74□□□□□ -0.37
CHRNB1-202ENST00000536404 CDK7P50613 346 aa12.74□□□□□ -0.37
CHRNB1-202ENST00000536404 CDK17Q00537 523 aa12.74□□□□□ -0.37
CHRNB1-202ENST00000536404 ITIH3Q06033 890 aa12.74□□□□□ -0.37
CHRNB1-202ENST00000536404 BAATQ14032 418 aaPredicted RBP12.74□□□□□ -0.37
CHRNB1-202ENST00000536404 CCDC122Q5T0U0 273 aa12.74□□□□□ -0.37
CHRNB1-202ENST00000536404 TAPT1Q6NXT6 567 aa12.74□□□□□ -0.37
CHRNB1-202ENST00000536404 TMTC3Q6ZXV5 915 aa12.74□□□□□ -0.37
CHRNB1-202ENST00000536404 CCDC82Q8N4S0 544 aa12.74□□□□□ -0.37
CHRNB1-202ENST00000536404 PCSK9Q8NBP7 692 aaKnown RBP12.74□□□□□ -0.37
CHRNB1-202ENST00000536404 TNFRSF25Q93038 417 aa12.74□□□□□ -0.37
CHRNB1-202ENST00000536404 DHTKD1Q96HY7 919 aaPredicted RBP12.74□□□□□ -0.37
CHRNB1-202ENST00000536404 GLT1D1Q96MS3 346 aa12.74□□□□□ -0.37
CHRNB1-202ENST00000536404 FAM161BQ96MY7 647 aa12.74□□□□□ -0.37
CHRNB1-202ENST00000536404 TOX2Q96NM4 488 aa12.74□□□□□ -0.37
CHRNB1-202ENST00000536404 V9GY48 417 aaPredicted RBP12.74□□□□□ -0.37
CHRNB1-202ENST00000536404 LAD1O00515 517 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 NFIBO00712 420 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 DYNC1LI2O43237 492 aaPredicted RBP12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 USO1O60763 962 aaKnown RBP12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 SMPD1P17405 629 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 NLRP5P59047 1200 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 FUT2Q10981 343 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 ZNF174Q15697 407 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 MEA1Q16626 185 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 FAM109BQ6ICB4 259 aaPredicted RBP12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 GALNT17Q6IS24 598 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 FAM43BQ6ZT52 329 aaPredicted RBP12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 FBXO16Q8IX29 292 aaPredicted RBP12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 OTUD6BQ8N6M0 293 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 CAGE1Q8TC20 777 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 COG1Q8WTW3 980 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 JAKMIP2Q96AA8 810 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 PAIP2Q9BPZ3 127 aaKnown RBP12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 GUCA1BQ9UMX6 200 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 GNEQ9Y223 722 aaKnown RBP12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 STXBP5LQ9Y2K9 1186 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 LCTP09848 1927 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 ARVCFO00192 962 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 RNF40O75150 1001 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 GOLGA8HP0CJ92 632 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 RDXP35241 583 aaKnown RBP12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 STAT6P42226 847 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 NKX3-2P78367 333 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 ZBED6P86452 979 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 ZNF543Q08ER8 600 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 BIRC2Q13490 618 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 CCDC178Q5BJE1 867 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 FIGNQ5HY92 759 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 ADSSL1Q8N142 457 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 CCDC155Q8N6L0 562 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 ENAHQ8N8S7 591 aaPredicted RBP12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 CLEC4DQ8WXI8 215 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 GUCD1Q96NT3 240 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 UBA5Q9GZZ9 404 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 CPVLQ9H3G5 476 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 FAM204AQ9H8W3 233 aa12.73□□□□□ -0.37
CHRNB1-202ENST00000536404 A0A1W2PQJ5 194 aa12.72□□□□□ -0.37
CHRNB1-202ENST00000536404 ANKRD33BA6NCL7 494 aa12.72□□□□□ -0.37
CHRNB1-202ENST00000536404 GOLGA8KD6RF30 607 aa12.72□□□□□ -0.37
CHRNB1-202ENST00000536404 OPA1O60313 960 aa12.72□□□□□ -0.37
CHRNB1-202ENST00000536404 SNHG28P0DPA3 235 aa12.72□□□□□ -0.37
CHRNB1-202ENST00000536404 SCG2P13521 617 aa12.72□□□□□ -0.37
CHRNB1-202ENST00000536404 PRLRP16471 622 aa12.72□□□□□ -0.37
CHRNB1-202ENST00000536404 GNAQP50148 359 aa12.72□□□□□ -0.37
CHRNB1-202ENST00000536404 FPGSQ05932 587 aa12.72□□□□□ -0.37
CHRNB1-202ENST00000536404 CRYMQ14894 314 aa12.72□□□□□ -0.37
CHRNB1-202ENST00000536404 IQSEC1Q6DN90 963 aa12.72□□□□□ -0.37
CHRNB1-202ENST00000536404 CXCL17Q6UXB2 119 aa12.72□□□□□ -0.37
CHRNB1-202ENST00000536404 SLC30A10Q6XR72 485 aa12.72□□□□□ -0.37
CHRNB1-202ENST00000536404 TLK2Q86UE8 772 aa12.72□□□□□ -0.37
CHRNB1-202ENST00000536404 MICALL1Q8N3F8 863 aa12.72□□□□□ -0.37
CHRNB1-202ENST00000536404 MORC4Q8TE76 937 aa12.72□□□□□ -0.37
CHRNB1-202ENST00000536404 MIEF2Q96C03 454 aa12.72□□□□□ -0.37
CHRNB1-202ENST00000536404 EXOC1Q9NV70 894 aa12.72□□□□□ -0.37
CHRNB1-202ENST00000536404 TBX21Q9UL17 535 aa12.72□□□□□ -0.37
CHRNB1-202ENST00000536404 HPCAL4Q9UM19 191 aa12.72□□□□□ -0.37
CHRNB1-202ENST00000536404 ATXN2Q99700 1313 aaKnown RBP12.71□□□□□ -0.37
CHRNB1-202ENST00000536404 LRRIQ3A6PVS8 624 aaPredicted RBP12.71□□□□□ -0.37
CHRNB1-202ENST00000536404 TIMP1P01033 207 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms