RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 MBOAT7Q96N66 472 aa14.76□□□□□ -0.05
RTN3-207ENST00000536011 DACT1Q9NYF0 836 aa14.76□□□□□ -0.05
RTN3-207ENST00000536011 SSUH2Q9Y2M2 353 aa14.76□□□□□ -0.05
RTN3-207ENST00000536011 WDR81Q562E7 1941 aa14.75□□□□□ -0.05
RTN3-207ENST00000536011 CSPG5O95196 566 aa14.75□□□□□ -0.05
RTN3-207ENST00000536011 ALADP13716 330 aa14.75□□□□□ -0.05
RTN3-207ENST00000536011 DARSP14868 501 aaKnown RBP14.75□□□□□ -0.05
RTN3-207ENST00000536011 GATMP50440 423 aa14.75□□□□□ -0.05
RTN3-207ENST00000536011 GPC3P51654 580 aa14.75□□□□□ -0.05
RTN3-207ENST00000536011 SMAD4Q13485 552 aaKnown RBP14.75□□□□□ -0.05
RTN3-207ENST00000536011 DSC3Q14574 896 aa14.75□□□□□ -0.05
RTN3-207ENST00000536011 LETM2Q2VYF4 491 aa14.75□□□□□ -0.05
RTN3-207ENST00000536011 ERICH6BQ5W0A0 696 aa14.75□□□□□ -0.05
RTN3-207ENST00000536011 EXOC8Q8IYI6 725 aa14.75□□□□□ -0.05
RTN3-207ENST00000536011 THNSL1Q8IYQ7 743 aa14.75□□□□□ -0.05
RTN3-207ENST00000536011 LRRC43Q8N309 656 aa14.75□□□□□ -0.05
RTN3-207ENST00000536011 FAM20AQ96MK3 541 aa14.75□□□□□ -0.05
RTN3-207ENST00000536011 LARP6Q9BRS8 491 aaKnown RBP14.75□□□□□ -0.05
RTN3-207ENST00000536011 PHF20Q9BVI0 1012 aa14.75□□□□□ -0.05
RTN3-207ENST00000536011 NIFKQ9BYG3 293 aaKnown RBP14.75□□□□□ -0.05
RTN3-207ENST00000536011 GCOM2Q9BZD3 368 aaPredicted RBP14.75□□□□□ -0.05
RTN3-207ENST00000536011 TMEM117Q9H0C3 514 aa14.75□□□□□ -0.05
RTN3-207ENST00000536011 ADAMTS10Q9H324 1103 aa14.75□□□□□ -0.05
RTN3-207ENST00000536011 IGFLR1Q9H665 355 aa14.75□□□□□ -0.05
RTN3-207ENST00000536011 BRMS1Q9HCU9 246 aa14.75□□□□□ -0.05
RTN3-207ENST00000536011 HCN4Q9Y3Q4 1203 aa14.75□□□□□ -0.05
RTN3-207ENST00000536011 MYO7AQ13402 2215 aa14.75□□□□□ -0.05
RTN3-207ENST00000536011 ATG2AQ2TAZ0 1938 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 PI4K2BG5E9Z4 385 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 EDIL3O43854 480 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 MARCH6O60337 910 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 PFKFB2O60825 505 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 SRGAP2BP0DMP2 458 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 SFPQP23246 707 aaKnown RBP eCLIP14.74□□□□□ -0.05
RTN3-207ENST00000536011 PPM1AP35813 382 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 LTBRP36941 435 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 PSMC5P62195 406 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 SCRN1Q12765 414 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 CAMK1Q14012 370 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 TARBP2Q15633 366 aaKnown RBP14.74□□□□□ -0.05
RTN3-207ENST00000536011 NPY5RQ15761 445 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 SMAD2Q15796 467 aaKnown RBP14.74□□□□□ -0.05
RTN3-207ENST00000536011 INF2Q27J81 1249 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 MTERF2Q49AM1 385 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 FAM102BQ5T8I3 360 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 PPP4R3AQ6IN85 833 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 B3GNT9Q6UX72 402 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 NEK8Q86SG6 692 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 ADHFE1Q8IWW8 467 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 EFHBQ8N7U6 833 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 COLGALT1Q8NBJ5 622 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 MICAL1Q8TDZ2 1067 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 AIFM3Q96NN9 605 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 INO80BQ9C086 356 aaPredicted RBP14.74□□□□□ -0.05
RTN3-207ENST00000536011 EPHX3Q9H6B9 360 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 TLR9Q9NR96 1032 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 PPP4R2Q9NY27 417 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 PUF60Q9UHX1 559 aaKnown RBP14.74□□□□□ -0.05
RTN3-207ENST00000536011 CD207Q9UJ71 328 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 PPME1Q9Y570 386 aa14.74□□□□□ -0.05
RTN3-207ENST00000536011 FNDC1Q4ZHG4 1894 aaPredicted RBP14.74□□□□□ -0.05
RTN3-207ENST00000536011 CARNS1A5YM72 827 aa14.73□□□□□ -0.05
RTN3-207ENST00000536011 TBX3O15119 743 aa14.73□□□□□ -0.05
RTN3-207ENST00000536011 GPR37L1O60883 481 aa14.73□□□□□ -0.05
RTN3-207ENST00000536011 FGF18O76093 207 aa14.73□□□□□ -0.05
RTN3-207ENST00000536011 FGFR1P11362 822 aa14.73□□□□□ -0.05
RTN3-207ENST00000536011 DNAJB1P25685 340 aa14.73□□□□□ -0.05
RTN3-207ENST00000536011 NRIP1P48552 1158 aa14.73□□□□□ -0.05
RTN3-207ENST00000536011 ZP2Q05996 745 aa14.73□□□□□ -0.05
RTN3-207ENST00000536011 PPP2R5CQ13362 524 aa14.73□□□□□ -0.05
RTN3-207ENST00000536011 ADAM15Q13444 863 aa14.73□□□□□ -0.05
RTN3-207ENST00000536011 ZNF410Q86VK4 478 aa14.73□□□□□ -0.05
RTN3-207ENST00000536011 SLC7A3Q8WY07 619 aa14.73□□□□□ -0.05
RTN3-207ENST00000536011 GJA10Q969M2 543 aa14.73□□□□□ -0.05
RTN3-207ENST00000536011 CDCA3Q99618 268 aaPredicted RBP14.73□□□□□ -0.05
RTN3-207ENST00000536011 MRPL9Q9BYD2 267 aaKnown RBP14.73□□□□□ -0.05
RTN3-207ENST00000536011 TLE6Q9H808 572 aa14.73□□□□□ -0.05
RTN3-207ENST00000536011 CHST12Q9NRB3 414 aa14.73□□□□□ -0.05
RTN3-207ENST00000536011 TYW1Q9NV66 732 aaKnown RBP14.73□□□□□ -0.05
RTN3-207ENST00000536011 KCNJ14Q9UNX9 436 aa14.73□□□□□ -0.05
RTN3-207ENST00000536011 LZTS1Q9Y250 596 aa14.73□□□□□ -0.05
RTN3-207ENST00000536011 DDX11L8A8MPP1 907 aa14.72□□□□□ -0.05
RTN3-207ENST00000536011 CCNT1O60563 726 aaKnown RBP14.72□□□□□ -0.05
RTN3-207ENST00000536011 TBX10O75333 385 aa14.72□□□□□ -0.05
RTN3-207ENST00000536011 EOMESO95936 686 aa14.72□□□□□ -0.05
RTN3-207ENST00000536011 SKIP12755 728 aa14.72□□□□□ -0.05
RTN3-207ENST00000536011 QARSP47897 775 aaKnown RBP14.72□□□□□ -0.05
RTN3-207ENST00000536011 KRT17Q04695 432 aa14.72□□□□□ -0.05
RTN3-207ENST00000536011 CLUL1Q15846 466 aa14.72□□□□□ -0.05
RTN3-207ENST00000536011 ECHDC2Q86YB7 292 aa14.72□□□□□ -0.05
RTN3-207ENST00000536011 RNF169Q8NCN4 708 aa14.72□□□□□ -0.05
RTN3-207ENST00000536011 ZNF558Q96NG5 402 aa14.72□□□□□ -0.05
RTN3-207ENST00000536011 LRFN3Q9BTN0 628 aa14.72□□□□□ -0.05
RTN3-207ENST00000536011 KCNMB3Q9NPA1 279 aa14.72□□□□□ -0.05
RTN3-207ENST00000536011 CD320Q9NPF0 282 aa14.72□□□□□ -0.05
RTN3-207ENST00000536011 ORC3Q9UBD5 711 aaPredicted RBP14.72□□□□□ -0.05
RTN3-207ENST00000536011 TPCN1Q9ULQ1 816 aa14.72□□□□□ -0.05
RTN3-207ENST00000536011 C5orf42Q9H799 3197 aa14.72□□□□□ -0.05
RTN3-207ENST00000536011 IGKV6-21A0A0C4DH24 114 aa14.71□□□□□ -0.05
RTN3-207ENST00000536011 A0A0U1RQF3 1178 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms