RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 MIS18AQ9NYP9 233 aa7.4□□□□□ -1.22
USP28-202ENST00000535607 RTEL1Q9NZ71 1219 aa7.4□□□□□ -1.22
USP28-202ENST00000535607 PRR13Q9NZ81 148 aa7.4□□□□□ -1.22
USP28-202ENST00000535607 PFDN2Q9UHV9 154 aa7.4□□□□□ -1.22
USP28-202ENST00000535607 CAPN6Q9Y6Q1 641 aa7.4□□□□□ -1.22
USP28-202ENST00000535607 TMEM265A0A087WTH1 108 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 LRRN2O75325 713 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 PPFIA4O75335 1185 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 STARD3NLO95772 234 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 CPP00450 1065 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 FURINP09958 794 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 CCDC175P0C221 793 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 MMP14P50281 582 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 CLCN7P51798 805 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 CORO7P57737 925 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 TNK2Q07912 1038 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 TRDNQ13061 729 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 SLC39A6Q13433 755 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 ADCK5Q3MIX3 580 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 CFAP100Q494V2 611 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 CT47A1Q5JQC4 288 aaPredicted RBP7.39□□□□□ -1.23
USP28-202ENST00000535607 ARMCX5Q6P1M9 558 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 MMS22LQ6ZRQ5 1243 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 RSRC2Q7L4I2 434 aaKnown RBP7.39□□□□□ -1.23
USP28-202ENST00000535607 SRGAP1Q7Z6B7 1085 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 LRRN4CLQ8ND94 238 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 ENGASEQ8NFI3 743 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 ADCY4Q8NFM4 1077 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 ENOX1Q8TC92 643 aaKnown RBP7.39□□□□□ -1.23
USP28-202ENST00000535607 BAG1Q99933 345 aaPredicted RBP7.39□□□□□ -1.23
USP28-202ENST00000535607 FUT8Q9BYC5 575 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 PARD6BQ9BYG5 372 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 PRDM14Q9GZV8 571 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 PIF1Q9H611 641 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 VIPAS39Q9H9C1 493 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 CHST7Q9NS84 486 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 GFOD1Q9NXC2 390 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 VPS18Q9P253 973 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 MYO1AQ9UBC5 1043 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 ASAP1Q9ULH1 1129 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 AKT3Q9Y243 479 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 PPP2R2CQ9Y2T4 447 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 ZNF451Q9Y4E5 1061 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 MRFAP1Q9Y605 127 aa7.39□□□□□ -1.23
USP28-202ENST00000535607 TAF1LQ8IZX4 1826 aa7.38□□□□□ -1.23
USP28-202ENST00000535607 NUP188Q5SRE5 1749 aa7.38□□□□□ -1.23
USP28-202ENST00000535607 SCN7AQ01118 1682 aa7.38□□□□□ -1.23
USP28-202ENST00000535607 CNTNAP4Q9C0A0 1308 aa7.38□□□□□ -1.23
USP28-202ENST00000535607 MEIS1O00470 390 aa7.38□□□□□ -1.23
USP28-202ENST00000535607 MAP2K7O14733 419 aa7.38□□□□□ -1.23
USP28-202ENST00000535607 KCNQ3O43525 872 aa7.38□□□□□ -1.23
USP28-202ENST00000535607 SIGLEC6O43699 453 aa7.38□□□□□ -1.23
USP28-202ENST00000535607 DDX58O95786 925 aaKnown RBP7.38□□□□□ -1.23
USP28-202ENST00000535607 CPA1P15085 419 aa7.38□□□□□ -1.23
USP28-202ENST00000535607 FOSL1P15407 271 aa7.38□□□□□ -1.23
USP28-202ENST00000535607 STK3Q13188 491 aa7.38□□□□□ -1.23
USP28-202ENST00000535607 TOB2Q14106 344 aaPredicted RBP7.38□□□□□ -1.23
USP28-202ENST00000535607 PPP2R5DQ14738 602 aa7.38□□□□□ -1.23
USP28-202ENST00000535607 WHAMMP3Q1A5X7 153 aa7.38□□□□□ -1.23
USP28-202ENST00000535607 MCTP2Q6DN12 878 aa7.38□□□□□ -1.23
USP28-202ENST00000535607 TTLL5Q6EMB2 1281 aa7.38□□□□□ -1.23
USP28-202ENST00000535607 IQCEQ6IPM2 695 aa7.38□□□□□ -1.23
USP28-202ENST00000535607 AACSQ86V21 672 aa7.38□□□□□ -1.23
USP28-202ENST00000535607 VSTM4Q8IW00 320 aa7.38□□□□□ -1.23
USP28-202ENST00000535607 ELOA2Q8IYF1 753 aaPredicted RBP7.38□□□□□ -1.23
USP28-202ENST00000535607 BVESQ8NE79 360 aa7.38□□□□□ -1.23
USP28-202ENST00000535607 RPGRIP1Q96KN7 1286 aa7.38□□□□□ -1.23
USP28-202ENST00000535607 DNAJC7Q99615 494 aa7.38□□□□□ -1.23
USP28-202ENST00000535607 KLHL25Q9H0H3 589 aa7.38□□□□□ -1.23
USP28-202ENST00000535607 TMX1Q9H3N1 280 aa7.38□□□□□ -1.23
USP28-202ENST00000535607 NOL6Q9H6R4 1146 aaKnown RBP7.38□□□□□ -1.23
USP28-202ENST00000535607 DDX21Q9NR30 783 aaKnown RBP eCLIP7.38□□□□□ -1.23
USP28-202ENST00000535607 C9orf78Q9NZ63 289 aaPredicted RBP7.38□□□□□ -1.23
USP28-202ENST00000535607 DIS3Q9Y2L1 958 aaKnown RBP7.38□□□□□ -1.23
USP28-202ENST00000535607 ARFGEF2Q9Y6D5 1785 aa7.38□□□□□ -1.23
USP28-202ENST00000535607 C4BP0C0L5 1744 aa7.38□□□□□ -1.23
USP28-202ENST00000535607 MED23Q9ULK4 1368 aa7.37□□□□□ -1.23
USP28-202ENST00000535607 A0A087WZG4 1122 aa7.37□□□□□ -1.23
USP28-202ENST00000535607 SHTN1A0MZ66 631 aa7.37□□□□□ -1.23
USP28-202ENST00000535607 CTAGE9A4FU28 777 aa7.37□□□□□ -1.23
USP28-202ENST00000535607 FAM221BA6H8Z2 402 aa7.37□□□□□ -1.23
USP28-202ENST00000535607 PRR33A8MZF0 331 aa7.37□□□□□ -1.23
USP28-202ENST00000535607 EIF3CLB5ME19 914 aaKnown RBP7.37□□□□□ -1.23
USP28-202ENST00000535607 H3BS24 57 aa7.37□□□□□ -1.23
USP28-202ENST00000535607 CMA1P23946 247 aa7.37□□□□□ -1.23
USP28-202ENST00000535607 OXCT1P55809 520 aa7.37□□□□□ -1.23
USP28-202ENST00000535607 ST5P78524 1137 aa7.37□□□□□ -1.23
USP28-202ENST00000535607 ST3GAL1Q11201 340 aa7.37□□□□□ -1.23
USP28-202ENST00000535607 SLC10A6Q3KNW5 377 aa7.37□□□□□ -1.23
USP28-202ENST00000535607 MRM1Q6IN84 353 aaKnown RBP7.37□□□□□ -1.23
USP28-202ENST00000535607 FAM173BQ6P4H8 233 aa7.37□□□□□ -1.23
USP28-202ENST00000535607 INTS5Q6P9B9 1019 aaKnown RBP7.37□□□□□ -1.23
USP28-202ENST00000535607 TRIM65Q6PJ69 517 aa7.37□□□□□ -1.23
USP28-202ENST00000535607 GBP6Q6ZN66 633 aa7.37□□□□□ -1.23
USP28-202ENST00000535607 Q6ZUG5 572 aa7.37□□□□□ -1.23
USP28-202ENST00000535607 MICALCLQ6ZW33 695 aa7.37□□□□□ -1.23
USP28-202ENST00000535607 ZDHHC13Q8IUH4 622 aa7.37□□□□□ -1.23
USP28-202ENST00000535607 SHISA5Q8N114 240 aa7.37□□□□□ -1.23
USP28-202ENST00000535607 FIBCD1Q8N539 461 aa7.37□□□□□ -1.23
USP28-202ENST00000535607 MSANTD4Q8NCY6 345 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms