RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 ADRA2BP18089 450 aa20.77■□□□□ 0.92
SMPD1-210ENST00000534405 TNNI2P48788 182 aa20.77■□□□□ 0.92
SMPD1-210ENST00000534405 ATP11AP98196 1134 aa20.77■□□□□ 0.92
SMPD1-210ENST00000534405 GALNTL6Q49A17 601 aa20.77■□□□□ 0.92
SMPD1-210ENST00000534405 ADGRF4Q8IZF3 695 aa20.77■□□□□ 0.92
SMPD1-210ENST00000534405 SNX29Q8TEQ0 813 aa20.77■□□□□ 0.92
SMPD1-210ENST00000534405 RAD54LQ92698 747 aa20.77■□□□□ 0.92
SMPD1-210ENST00000534405 CCDC42Q96M95 316 aa20.77■□□□□ 0.92
SMPD1-210ENST00000534405 KRT12Q99456 494 aa20.77■□□□□ 0.92
SMPD1-210ENST00000534405 MXD3Q9BW11 206 aa20.77■□□□□ 0.92
SMPD1-210ENST00000534405 ECT2Q9H8V3 914 aa20.77■□□□□ 0.92
SMPD1-210ENST00000534405 ARHGEF3Q9NR81 526 aa20.77■□□□□ 0.92
SMPD1-210ENST00000534405 EP400Q96L91 3159 aa20.77■□□□□ 0.91
SMPD1-210ENST00000534405 UBR3Q6ZT12 1888 aa20.77■□□□□ 0.91
SMPD1-210ENST00000534405 A0A1W2PQJ5 194 aa20.76■□□□□ 0.91
SMPD1-210ENST00000534405 DCDC2CA8MYV0 355 aa20.76■□□□□ 0.91
SMPD1-210ENST00000534405 KRT16P08779 473 aa20.76■□□□□ 0.91
SMPD1-210ENST00000534405 GNAZP19086 355 aa20.76■□□□□ 0.91
SMPD1-210ENST00000534405 MSH2P43246 934 aa20.76■□□□□ 0.91
SMPD1-210ENST00000534405 TRIM68Q6AZZ1 485 aa20.76■□□□□ 0.91
SMPD1-210ENST00000534405 GPIHBP1Q8IV16 184 aa20.76■□□□□ 0.91
SMPD1-210ENST00000534405 TLCD1Q96CP7 247 aa20.76■□□□□ 0.91
SMPD1-210ENST00000534405 SAMD15Q9P1V8 674 aa20.76■□□□□ 0.91
SMPD1-210ENST00000534405 PVALEFA0A1B0GWK0 134 aa20.76■□□□□ 0.91
SMPD1-210ENST00000534405 ATP6V1C1P21283 382 aa20.76■□□□□ 0.91
SMPD1-210ENST00000534405 HOXA10P31260 410 aaPredicted RBP20.76■□□□□ 0.91
SMPD1-210ENST00000534405 LACTBP83111 547 aaPredicted RBP20.76■□□□□ 0.91
SMPD1-210ENST00000534405 MTMR3Q13615 1198 aa20.76■□□□□ 0.91
SMPD1-210ENST00000534405 LRRC41Q15345 812 aa20.76■□□□□ 0.91
SMPD1-210ENST00000534405 VWA3BQ502W6 1294 aa20.76■□□□□ 0.91
SMPD1-210ENST00000534405 CDK5RAP3Q96JB5 506 aa20.76■□□□□ 0.91
SMPD1-210ENST00000534405 FAM207AQ9NSI2 230 aaPredicted RBP20.76■□□□□ 0.91
SMPD1-210ENST00000534405 ABCF3Q9NUQ8 709 aa20.76■□□□□ 0.91
SMPD1-210ENST00000534405 LTBP1Q14766 1721 aa20.76■□□□□ 0.91
SMPD1-210ENST00000534405 E7ENQ6 273 aa20.75■□□□□ 0.91
SMPD1-210ENST00000534405 CREB3O43889 395 aa20.75■□□□□ 0.91
SMPD1-210ENST00000534405 UBOX5O94941 541 aa20.75■□□□□ 0.91
SMPD1-210ENST00000534405 LCA5LO95447 670 aa20.75■□□□□ 0.91
SMPD1-210ENST00000534405 SLC16A2P36021 539 aa20.75■□□□□ 0.91
SMPD1-210ENST00000534405 ZNF543Q08ER8 600 aa20.75■□□□□ 0.91
SMPD1-210ENST00000534405 CUL1Q13616 776 aa20.75■□□□□ 0.91
SMPD1-210ENST00000534405 TMEM266Q2M3C6 531 aa20.75■□□□□ 0.91
SMPD1-210ENST00000534405 KLHDC7AQ5VTJ3 777 aa20.75■□□□□ 0.91
SMPD1-210ENST00000534405 DDX12PQ92771 950 aa20.75■□□□□ 0.91
SMPD1-210ENST00000534405 HAS1Q92839 578 aa20.75■□□□□ 0.91
SMPD1-210ENST00000534405 TRAPPC9Q96Q05 1148 aa20.75■□□□□ 0.91
SMPD1-210ENST00000534405 DNAAF2Q9NVR5 837 aaKnown RBP20.75■□□□□ 0.91
SMPD1-210ENST00000534405 ARHGAP20Q9P2F6 1191 aa20.75■□□□□ 0.91
SMPD1-210ENST00000534405 PHF24Q9UPV7 400 aa20.75■□□□□ 0.91
SMPD1-210ENST00000534405 SP100P23497 879 aaPredicted RBP20.75■□□□□ 0.91
SMPD1-210ENST00000534405 EHHADHQ08426 723 aa20.75■□□□□ 0.91
SMPD1-210ENST00000534405 TMEM119Q4V9L6 283 aa20.75■□□□□ 0.91
SMPD1-210ENST00000534405 LRRC55Q6ZSA7 311 aa20.75■□□□□ 0.91
SMPD1-210ENST00000534405 GUF1Q8N442 669 aaKnown RBP20.75■□□□□ 0.91
SMPD1-210ENST00000534405 IFT43Q96FT9 208 aa20.75■□□□□ 0.91
SMPD1-210ENST00000534405 UBE2OQ9C0C9 1292 aaKnown RBP20.75■□□□□ 0.91
SMPD1-210ENST00000534405 RAB17Q9H0T7 212 aa20.75■□□□□ 0.91
SMPD1-210ENST00000534405 MMADHCQ9H3L0 296 aaPredicted RBP20.75■□□□□ 0.91
SMPD1-210ENST00000534405 ZWILCHQ9H900 591 aa20.75■□□□□ 0.91
SMPD1-210ENST00000534405 RIC8AQ9NPQ8 531 aa20.75■□□□□ 0.91
SMPD1-210ENST00000534405 RAD51CO43502 376 aa20.74■□□□□ 0.91
SMPD1-210ENST00000534405 CLK2P49760 499 aaKnown RBP20.74■□□□□ 0.91
SMPD1-210ENST00000534405 MYLK4Q86YV6 388 aaPredicted RBP20.74■□□□□ 0.91
SMPD1-210ENST00000534405 MDM1Q8TC05 714 aa20.74■□□□□ 0.91
SMPD1-210ENST00000534405 MAIP1Q8WWC4 291 aa20.74■□□□□ 0.91
SMPD1-210ENST00000534405 KIFAP3Q92845 792 aa20.74■□□□□ 0.91
SMPD1-210ENST00000534405 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.74■□□□□ 0.91
SMPD1-210ENST00000534405 PLAGL2Q9UPG8 496 aa20.74■□□□□ 0.91
SMPD1-210ENST00000534405 PNMA6FA0A0J9YX94 578 aa20.74■□□□□ 0.91
SMPD1-210ENST00000534405 PJA2O43164 708 aa20.74■□□□□ 0.91
SMPD1-210ENST00000534405 SHMT1P34896 483 aa20.74■□□□□ 0.91
SMPD1-210ENST00000534405 MYBPC3Q14896 1274 aa20.74■□□□□ 0.91
SMPD1-210ENST00000534405 KCNV2Q8TDN2 545 aa20.74■□□□□ 0.91
SMPD1-210ENST00000534405 KLHL29Q96CT2 875 aa20.74■□□□□ 0.91
SMPD1-210ENST00000534405 UIMC1Q96RL1 719 aa20.74■□□□□ 0.91
SMPD1-210ENST00000534405 TTLL1O95922 423 aa20.73■□□□□ 0.91
SMPD1-210ENST00000534405 HNRNPH3P31942 346 aaKnown RBP20.73■□□□□ 0.91
SMPD1-210ENST00000534405 KRT79Q5XKE5 535 aa20.73■□□□□ 0.91
SMPD1-210ENST00000534405 C2CD5Q86YS7 1000 aa20.73■□□□□ 0.91
SMPD1-210ENST00000534405 ATXN2LQ8WWM7 1075 aaKnown RBP20.73■□□□□ 0.91
SMPD1-210ENST00000534405 MYH7BA7E2Y1 1941 aa20.73■□□□□ 0.91
SMPD1-210ENST00000534405 ADAMTSL1Q8N6G6 1762 aa20.73■□□□□ 0.91
SMPD1-210ENST00000534405 PSMC4P43686 418 aa20.73■□□□□ 0.91
SMPD1-210ENST00000534405 COPS2P61201 443 aa20.73■□□□□ 0.91
SMPD1-210ENST00000534405 ERVK-9P63128 1117 aa20.73■□□□□ 0.91
SMPD1-210ENST00000534405 BNIP1Q12981 228 aa20.73■□□□□ 0.91
SMPD1-210ENST00000534405 HLTFQ14527 1009 aaKnown RBP eCLIP20.73■□□□□ 0.91
SMPD1-210ENST00000534405 PABPC1LQ4VXU2 614 aaKnown RBP20.73■□□□□ 0.91
SMPD1-210ENST00000534405 ACBD5Q5T8D3 534 aaPredicted RBP20.73■□□□□ 0.91
SMPD1-210ENST00000534405 DPY19L2Q6NUT2 758 aa20.73■□□□□ 0.91
SMPD1-210ENST00000534405 MAEAQ7L5Y9 396 aa20.73■□□□□ 0.91
SMPD1-210ENST00000534405 LRRC34Q8IZ02 419 aa20.73■□□□□ 0.91
SMPD1-210ENST00000534405 GBP7Q8N8V2 638 aaPredicted RBP20.73■□□□□ 0.91
SMPD1-210ENST00000534405 MIPOL1Q8TD10 442 aa20.73■□□□□ 0.91
SMPD1-210ENST00000534405 IFT74Q96LB3 600 aa20.73■□□□□ 0.91
SMPD1-210ENST00000534405 CRAMP1Q96RY5 1269 aa20.73■□□□□ 0.91
SMPD1-210ENST00000534405 CTNNAL1Q9UBT7 734 aa20.73■□□□□ 0.91
SMPD1-210ENST00000534405 SERPINB13Q9UIV8 391 aa20.73■□□□□ 0.91
SMPD1-210ENST00000534405 USP17L10C9JJH3 530 aa20.72■□□□□ 0.91
SMPD1-210ENST00000534405 BHMG1C9JSJ3 638 aaPredicted RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms