RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 RBM5P52756 815 aaKnown RBP eCLIP3.64□□□□□ -1.83
CSDE1-216ENST00000534389 ANAPC15P60006 121 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 IL2P60568 153 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 UBE2HP62256 183 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 IQCB1Q15051 598 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 ZNF174Q15697 407 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 MLANAQ16655 118 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 DALRD3Q5D0E6 543 aaKnown RBP3.64□□□□□ -1.83
CSDE1-216ENST00000534389 TRIM61Q5EBN2 209 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 FYB2Q5VWT5 728 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 TTLL5Q6EMB2 1281 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 ZCCHC8Q6NZY4 707 aaKnown RBP3.64□□□□□ -1.83
CSDE1-216ENST00000534389 TRIM65Q6PJ69 517 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 TMCO3Q6UWJ1 677 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 NOL8Q76FK4 1167 aaKnown RBP3.64□□□□□ -1.83
CSDE1-216ENST00000534389 DDX46Q7L014 1031 aaKnown RBP3.64□□□□□ -1.83
CSDE1-216ENST00000534389 TMC6Q7Z403 805 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.64□□□□□ -1.83
CSDE1-216ENST00000534389 TADA2BQ86TJ2 420 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 MORC1Q86VD1 984 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 TRIM48Q8IWZ4 208 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 UBR7Q8N806 425 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 PRPF38AQ8NAV1 312 aaKnown RBP3.64□□□□□ -1.83
CSDE1-216ENST00000534389 NETO2Q8NC67 525 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 NLGN2Q8NFZ4 835 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 OR2W6PQ8NHA6 318 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 ATL2Q8NHH9 583 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 WDR48Q8TAF3 677 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 PIP4K2CQ8TBX8 421 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 PPM1EQ8WY54 764 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 ALG3Q92685 438 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 ITFG2Q969R8 447 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 MIEF2Q96C03 454 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 CCDC34Q96HJ3 373 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 PPP1R13BQ96KQ4 1090 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 KRTAP4-9Q9BYQ8 210 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 C19orf73Q9NVV2 129 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 CWC15Q9P013 229 aaKnown RBP3.64□□□□□ -1.83
CSDE1-216ENST00000534389 PPARGC1AQ9UBK2 798 aaKnown RBP3.64□□□□□ -1.83
CSDE1-216ENST00000534389 ADGRE2Q9UHX3 823 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 FBXL7Q9UJT9 491 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 ZNF281Q9Y2X9 895 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 PCDHB4Q9Y5E5 795 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 USP16Q9Y5T5 823 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 MED14O60244 1454 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 CCDC141Q6ZP82 1450 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 MYOM1P52179 1685 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 PIK3R4Q99570 1358 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 CADPSQ9ULU8 1353 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 REREQ9P2R6 1566 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 RNF17Q9BXT8 1623 aaKnown RBP3.63□□□□□ -1.83
CSDE1-216ENST00000534389 PPRC1Q5VV67 1664 aaKnown RBP3.63□□□□□ -1.83
CSDE1-216ENST00000534389 RAD54L2Q9Y4B4 1467 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 hCG_2014768A0A024R1R8 64 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 A0A087WUV0 522 aaPredicted RBP3.63□□□□□ -1.83
CSDE1-216ENST00000534389 H7C1D1 291 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 EXOC5O00471 708 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 SGSM2O43147 1006 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 FIBPO43427 364 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 DNAJC8O75937 253 aaPredicted RBP3.63□□□□□ -1.83
CSDE1-216ENST00000534389 NPTXRO95502 500 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 IVLP07476 585 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 DBHP09172 617 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 IFIT2P09913 472 aaKnown RBP3.63□□□□□ -1.83
CSDE1-216ENST00000534389 CCDC192P0DO97 292 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 PDE6AP16499 860 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 CASTP20810 708 aaKnown RBP3.63□□□□□ -1.83
CSDE1-216ENST00000534389 CHMLP26374 656 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 FNTAP49354 379 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 CCNHP51946 323 aaPredicted RBP3.63□□□□□ -1.83
CSDE1-216ENST00000534389 SRSF3P84103 164 aaKnown RBP3.63□□□□□ -1.83
CSDE1-216ENST00000534389 CYP4F3Q08477 520 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 STRN3Q13033 797 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 GPS2Q13227 327 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 ZNF460Q14592 562 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 SLC9A5Q14940 896 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 TESK1Q15569 626 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 GPR19Q15760 415 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 ANO6Q4KMQ2 910 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 TMEM177Q53S58 311 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 CCDC158Q5M9N0 1113 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 CCDC30Q5VVM6 783 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 CDCA2Q69YH5 1023 aaPredicted RBP3.63□□□□□ -1.83
CSDE1-216ENST00000534389 ARHGAP36Q6ZRI8 547 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 RBM43Q6ZSC3 357 aaKnown RBP3.63□□□□□ -1.83
CSDE1-216ENST00000534389 C16orf59Q7L2K0 433 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 RSRC2Q7L4I2 434 aaKnown RBP3.63□□□□□ -1.83
CSDE1-216ENST00000534389 ZC3H18Q86VM9 953 aaKnown RBP3.63□□□□□ -1.83
CSDE1-216ENST00000534389 OSTM1Q86WC4 334 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 IRF2BP1Q8IU81 584 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 PASD1Q8IV76 773 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 DRC7Q8IY82 874 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 NLGN4XQ8N0W4 816 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 GSTCDQ8NEC7 633 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 PCDH19Q8TAB3 1148 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 PLEKHO2Q8TD55 490 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 DPF3Q92784 378 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 GCC1Q96CN9 775 aa3.63□□□□□ -1.83
CSDE1-216ENST00000534389 LIN37Q96GY3 246 aaPredicted RBP3.63□□□□□ -1.83
CSDE1-216ENST00000534389 TARS2Q9BW92 718 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms