RNA–Protein interactions for RNA: ENST00000534290.1

NCAPD3-212, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 2

Gene NCAPD3, Length 352 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-212ENST00000534290 OTOP2Q7RTS6 562 aa11.84□□□□□ -0.51
NCAPD3-212ENST00000534290 APTXQ7Z2E3 356 aaKnown RBP11.84□□□□□ -0.51
NCAPD3-212ENST00000534290 SMYD4Q8IYR2 804 aaPredicted RBP11.84□□□□□ -0.51
NCAPD3-212ENST00000534290 MYOCDQ8IZQ8 938 aa11.84□□□□□ -0.51
NCAPD3-212ENST00000534290 CPLX3Q8WVH0 158 aa11.84□□□□□ -0.51
NCAPD3-212ENST00000534290 PLIN2Q99541 437 aa11.84□□□□□ -0.51
NCAPD3-212ENST00000534290 AP5M1Q9H0R1 490 aa11.84□□□□□ -0.51
NCAPD3-212ENST00000534290 TRPV6Q9H1D0 765 aa11.84□□□□□ -0.51
NCAPD3-212ENST00000534290 MTIF3Q9H2K0 278 aaKnown RBP11.84□□□□□ -0.51
NCAPD3-212ENST00000534290 HIPK3Q9H422 1215 aa11.84□□□□□ -0.51
NCAPD3-212ENST00000534290 L2HGDHQ9H9P8 463 aa11.84□□□□□ -0.51
NCAPD3-212ENST00000534290 SLC28A3Q9HAS3 691 aa11.84□□□□□ -0.51
NCAPD3-212ENST00000534290 A1CFQ9NQ94 594 aaKnown RBP11.84□□□□□ -0.51
NCAPD3-212ENST00000534290 INTS13Q9NVM9 706 aa11.84□□□□□ -0.51
NCAPD3-212ENST00000534290 DNAI1Q9UI46 699 aa11.84□□□□□ -0.51
NCAPD3-212ENST00000534290 CAPN11Q9UMQ6 739 aa11.84□□□□□ -0.51
NCAPD3-212ENST00000534290 DNM3Q9UQ16 869 aa11.84□□□□□ -0.51
NCAPD3-212ENST00000534290 GNEQ9Y223 722 aaKnown RBP11.84□□□□□ -0.51
NCAPD3-212ENST00000534290 GDAQ9Y2T3 454 aa11.84□□□□□ -0.51
NCAPD3-212ENST00000534290 ASTN1O14525 1302 aa11.84□□□□□ -0.51
NCAPD3-212ENST00000534290 ZNF536O15090 1300 aa11.84□□□□□ -0.51
NCAPD3-212ENST00000534290 GRIN2DO15399 1336 aa11.84□□□□□ -0.51
NCAPD3-212ENST00000534290 TRANK1O15050 2925 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 A0A1W2PQJ5 194 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 USP27XA6NNY8 438 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 ADAMTS3O15072 1205 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 TEX33O43247 280 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 ZEB2O60315 1214 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 TDP2O95551 362 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 TUBBP07437 444 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 IDEP14735 1019 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 SMPD1P17405 629 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 COL9A1P20849 921 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 FECHP22830 423 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 CASP14P31944 242 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 CIITAP33076 1130 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 KRT9P35527 623 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 CCL23P55773 120 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 MRPS5P82675 430 aaKnown RBP11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 ARHGAP4P98171 946 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 RBM10P98175 930 aaKnown RBP11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 PPP2R3AQ06190 1150 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 IQSEC1Q6DN90 963 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 TTI2Q6NXR4 508 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 RASGRP2Q7LDG7 609 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 REXO1L1PQ8IX06 675 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 CCDC170Q8IYT3 715 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 ANKRD7Q92527 254 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 UBXN4Q92575 508 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 CEP63Q96MT8 703 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 TRERF1Q96PN7 1200 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 MED15Q96RN5 788 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 NOC4LQ9BVI4 516 aaKnown RBP11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 NKX2-4Q9H2Z4 354 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 LUC7LQ9NQ29 371 aaKnown RBP11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 PDGFCQ9NRA1 345 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 RNF146Q9NTX7 359 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 PANK4Q9NVE7 773 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 TAB2Q9NYJ8 693 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 MAP3K20Q9NYL2 800 aaKnown RBP11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 THEGQ9P2T0 379 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 BDP1A6H8Y1 2624 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 UMODL1Q5DID0 1318 aa11.83□□□□□ -0.52
NCAPD3-212ENST00000534290 GCOM1H8Y6P7 765 aaPredicted RBP11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 URI1O94763 535 aaPredicted RBP11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 POLR2MP0CAP2 368 aa11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 ALAS1P13196 640 aa11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 TRIM21P19474 475 aaKnown RBP11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 SREBF1P36956 1147 aa11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 SNAP25P60880 206 aa11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 ZBED6P86452 979 aa11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 FKBP3Q00688 224 aaKnown RBP11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 MCM6Q14566 821 aa11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 MAN2A1Q16706 1144 aa11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 UBE2SQ16763 222 aa11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 TKFCQ3LXA3 575 aa11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 TMEM63BQ5T3F8 832 aa11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 STXBP4Q6ZWJ1 553 aa11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 TLK2Q86UE8 772 aa11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 MCF2L2Q86YR7 1114 aa11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 TMEM139Q8IV31 216 aa11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 RPUSD2Q8IZ73 545 aaKnown RBP11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 CEP112Q8N8E3 955 aa11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 ADAMTS19Q8TE59 1207 aa11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 PNMA5Q96PV4 448 aa11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 MMTAG2Q9BU76 263 aaKnown RBP11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 SEZ6LQ9BYH1 1024 aa11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 KCNMB3Q9NPA1 279 aa11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 ABHD10Q9NUJ1 306 aa11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 MAPK8IP1Q9UQF2 711 aa11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 YBX2Q9Y2T7 364 aaKnown RBP11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 SLC4A7Q9Y6M7 1214 aa11.82□□□□□ -0.52
NCAPD3-212ENST00000534290 EFCAB8A8MWE9 144 aa11.81□□□□□ -0.52
NCAPD3-212ENST00000534290 SLC37A4O43826 429 aa11.81□□□□□ -0.52
NCAPD3-212ENST00000534290 B4GALT4O60513 344 aa11.81□□□□□ -0.52
NCAPD3-212ENST00000534290 PPP1R11O60927 126 aaPredicted RBP11.81□□□□□ -0.52
NCAPD3-212ENST00000534290 RPL13P26373 211 aaKnown RBP11.81□□□□□ -0.52
NCAPD3-212ENST00000534290 RABGGTBP53611 331 aa11.81□□□□□ -0.52
NCAPD3-212ENST00000534290 PSMC6P62333 389 aa11.81□□□□□ -0.52
NCAPD3-212ENST00000534290 CDK17Q00537 523 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms