RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 CHD9Q3L8U1 2897 aa17.28■□□□□ 0.36
UBXN1-217ENST00000534176 FAM205CA6NFA0 338 aa17.27■□□□□ 0.36
UBXN1-217ENST00000534176 MCM7P33993 719 aa17.27■□□□□ 0.36
UBXN1-217ENST00000534176 GUCY1B3Q02153 619 aa17.27■□□□□ 0.36
UBXN1-217ENST00000534176 GRB10Q13322 594 aa17.27■□□□□ 0.36
UBXN1-217ENST00000534176 MXD4Q14582 209 aaPredicted RBP17.27■□□□□ 0.36
UBXN1-217ENST00000534176 CSPP1Q1MSJ5 1256 aa17.27■□□□□ 0.36
UBXN1-217ENST00000534176 EPC2Q52LR7 807 aa17.27■□□□□ 0.36
UBXN1-217ENST00000534176 FAM228AQ86W67 206 aa17.27■□□□□ 0.36
UBXN1-217ENST00000534176 TMEM192Q8IY95 271 aa17.27■□□□□ 0.36
UBXN1-217ENST00000534176 CRIPAKQ8N1N5 446 aa17.27■□□□□ 0.36
UBXN1-217ENST00000534176 TMEM40Q8WWA1 233 aa17.27■□□□□ 0.36
UBXN1-217ENST00000534176 PSPC1Q8WXF1 523 aaKnown RBP17.27■□□□□ 0.36
UBXN1-217ENST00000534176 ADAM2Q99965 735 aa17.27■□□□□ 0.36
UBXN1-217ENST00000534176 LMAN2LQ9H0V9 348 aa17.27■□□□□ 0.36
UBXN1-217ENST00000534176 RC3H2Q9HBD1 1191 aaKnown RBP17.27■□□□□ 0.36
UBXN1-217ENST00000534176 TUFT1Q9NNX1 390 aa17.27■□□□□ 0.36
UBXN1-217ENST00000534176 TMEM161AQ9NX61 479 aa17.27■□□□□ 0.36
UBXN1-217ENST00000534176 SUCLA2Q9P2R7 463 aaPredicted RBP17.27■□□□□ 0.36
UBXN1-217ENST00000534176 COG5Q9UP83 839 aa17.27■□□□□ 0.36
UBXN1-217ENST00000534176 RALGAPA2Q2PPJ7 1873 aa17.27■□□□□ 0.35
UBXN1-217ENST00000534176 H3BNC9 293 aa17.26■□□□□ 0.35
UBXN1-217ENST00000534176 DGAT1O75907 488 aa17.26■□□□□ 0.35
UBXN1-217ENST00000534176 SLITRK3O94933 977 aa17.26■□□□□ 0.35
UBXN1-217ENST00000534176 OR52Z1P0C646 297 aa17.26■□□□□ 0.35
UBXN1-217ENST00000534176 FOSBP53539 338 aa17.26■□□□□ 0.35
UBXN1-217ENST00000534176 RILPL1Q5EBL4 403 aa17.26■□□□□ 0.35
UBXN1-217ENST00000534176 TTC38Q5R3I4 469 aa17.26■□□□□ 0.35
UBXN1-217ENST00000534176 TPH2Q8IWU9 490 aa17.26■□□□□ 0.35
UBXN1-217ENST00000534176 P2RX5Q93086 422 aa17.26■□□□□ 0.35
UBXN1-217ENST00000534176 DYDC2Q96IM9 177 aa17.26■□□□□ 0.35
UBXN1-217ENST00000534176 TRAIPQ9BWF2 469 aa17.26■□□□□ 0.35
UBXN1-217ENST00000534176 TMX1Q9H3N1 280 aa17.26■□□□□ 0.35
UBXN1-217ENST00000534176 CERS4Q9HA82 394 aa17.26■□□□□ 0.35
UBXN1-217ENST00000534176 AAASQ9NRG9 546 aa17.26■□□□□ 0.35
UBXN1-217ENST00000534176 THEGQ9P2T0 379 aa17.26■□□□□ 0.35
UBXN1-217ENST00000534176 SMC3Q9UQE7 1217 aa17.26■□□□□ 0.35
UBXN1-217ENST00000534176 C9IYK1 514 aa17.25■□□□□ 0.35
UBXN1-217ENST00000534176 H3BQV1 296 aa17.25■□□□□ 0.35
UBXN1-217ENST00000534176 EOMESO95936 686 aa17.25■□□□□ 0.35
UBXN1-217ENST00000534176 PDCP20941 246 aa17.25■□□□□ 0.35
UBXN1-217ENST00000534176 BMPR1AP36894 532 aa17.25■□□□□ 0.35
UBXN1-217ENST00000534176 FAM189BP81408 668 aa17.25■□□□□ 0.35
UBXN1-217ENST00000534176 POU5F1BQ06416 359 aa17.25■□□□□ 0.35
UBXN1-217ENST00000534176 PDIA5Q14554 519 aa17.25■□□□□ 0.35
UBXN1-217ENST00000534176 TIGD5Q53EQ6 642 aa17.25■□□□□ 0.35
UBXN1-217ENST00000534176 XKR9Q5GH70 373 aa17.25■□□□□ 0.35
UBXN1-217ENST00000534176 SRGAP1Q7Z6B7 1085 aa17.25■□□□□ 0.35
UBXN1-217ENST00000534176 RTN4RL1Q86UN2 441 aaPredicted RBP17.25■□□□□ 0.35
UBXN1-217ENST00000534176 RHPN2Q8IUC4 686 aa17.25■□□□□ 0.35
UBXN1-217ENST00000534176 KCTD17Q8N5Z5 321 aa17.25■□□□□ 0.35
UBXN1-217ENST00000534176 LINC01599Q8WXQ3 324 aa17.25■□□□□ 0.35
UBXN1-217ENST00000534176 MRPL38Q96DV4 380 aaKnown RBP17.25■□□□□ 0.35
UBXN1-217ENST00000534176 MTRQ99707 1265 aa17.25■□□□□ 0.35
UBXN1-217ENST00000534176 POLR3CQ9BUI4 534 aaPredicted RBP17.25■□□□□ 0.35
UBXN1-217ENST00000534176 CDHR5Q9HBB8 845 aa17.25■□□□□ 0.35
UBXN1-217ENST00000534176 ATP6V0A4Q9HBG4 840 aa17.25■□□□□ 0.35
UBXN1-217ENST00000534176 COL4A3BPQ9Y5P4 624 aa17.25■□□□□ 0.35
UBXN1-217ENST00000534176 LOXHD1Q8IVV2 1947 aa17.24■□□□□ 0.35
UBXN1-217ENST00000534176 NCK2O43639 380 aa17.24■□□□□ 0.35
UBXN1-217ENST00000534176 ARHGEF15O94989 841 aa17.24■□□□□ 0.35
UBXN1-217ENST00000534176 FXR2P51116 673 aaKnown RBP eCLIP17.24■□□□□ 0.35
UBXN1-217ENST00000534176 RAB27AP51159 221 aa17.24■□□□□ 0.35
UBXN1-217ENST00000534176 CYP4A11Q02928 519 aa17.24■□□□□ 0.35
UBXN1-217ENST00000534176 NCBP1Q09161 790 aaKnown RBP17.24■□□□□ 0.35
UBXN1-217ENST00000534176 TFDP1Q14186 410 aa17.24■□□□□ 0.35
UBXN1-217ENST00000534176 NACC1Q96RE7 527 aa17.24■□□□□ 0.35
UBXN1-217ENST00000534176 C17orf80Q9BSJ5 609 aa17.24■□□□□ 0.35
UBXN1-217ENST00000534176 BACH2Q9BYV9 841 aa17.24■□□□□ 0.35
UBXN1-217ENST00000534176 RGL1Q9NZL6 768 aa17.24■□□□□ 0.35
UBXN1-217ENST00000534176 MTUS1Q9ULD2 1270 aa17.24■□□□□ 0.35
UBXN1-217ENST00000534176 LPXNO60711 386 aa17.23■□□□□ 0.35
UBXN1-217ENST00000534176 DTNBO60941 627 aa17.23■□□□□ 0.35
UBXN1-217ENST00000534176 ATP2B1P20020 1258 aa17.23■□□□□ 0.35
UBXN1-217ENST00000534176 RPA1P27694 616 aa17.23■□□□□ 0.35
UBXN1-217ENST00000534176 CTNNB1P35222 781 aa17.23■□□□□ 0.35
UBXN1-217ENST00000534176 PRPHP41219 470 aa17.23■□□□□ 0.35
UBXN1-217ENST00000534176 MRPS5P82675 430 aaKnown RBP17.23■□□□□ 0.35
UBXN1-217ENST00000534176 GPM6BQ13491 265 aa17.23■□□□□ 0.35
UBXN1-217ENST00000534176 CTTNQ14247 550 aaKnown RBP17.23■□□□□ 0.35
UBXN1-217ENST00000534176 DSC3Q14574 896 aa17.23■□□□□ 0.35
UBXN1-217ENST00000534176 EMC2Q15006 297 aa17.23■□□□□ 0.35
UBXN1-217ENST00000534176 PLA2G4FQ68DD2 849 aa17.23■□□□□ 0.35
UBXN1-217ENST00000534176 ABI1Q8IZP0 508 aa17.23■□□□□ 0.35
UBXN1-217ENST00000534176 MCPH1Q8NEM0 835 aa17.23■□□□□ 0.35
UBXN1-217ENST00000534176 PPP2R3CQ969Q6 453 aa17.23■□□□□ 0.35
UBXN1-217ENST00000534176 DBR1Q9UK59 544 aaKnown RBP17.23■□□□□ 0.35
UBXN1-217ENST00000534176 CHD7Q9P2D1 2997 aa17.22■□□□□ 0.35
UBXN1-217ENST00000534176 A0A0U1RQF3 1178 aa17.22■□□□□ 0.35
UBXN1-217ENST00000534176 FSD2A1L4K1 749 aa17.22■□□□□ 0.35
UBXN1-217ENST00000534176 EPOPA6NHQ4 379 aa17.22■□□□□ 0.35
UBXN1-217ENST00000534176 GJB2P29033 226 aa17.22■□□□□ 0.35
UBXN1-217ENST00000534176 PHKA2P46019 1235 aa17.22■□□□□ 0.35
UBXN1-217ENST00000534176 NPEPPSP55786 919 aa17.22■□□□□ 0.35
UBXN1-217ENST00000534176 SKIV2LQ15477 1246 aaKnown RBP17.22■□□□□ 0.35
UBXN1-217ENST00000534176 ZNF174Q15697 407 aa17.22■□□□□ 0.35
UBXN1-217ENST00000534176 TJAP1Q5JTD0 557 aa17.22■□□□□ 0.35
UBXN1-217ENST00000534176 GDPD5Q8WTR4 605 aa17.22■□□□□ 0.35
UBXN1-217ENST00000534176 PPM1EQ8WY54 764 aa17.22■□□□□ 0.35
UBXN1-217ENST00000534176 NLRP4Q96MN2 994 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms