RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	MAP3K12	Q12852	859 aa		6.24	□□□□□ -1.41
ATM-223	ENST00000533979	CDSN	Q15517	529 aa		6.24	□□□□□ -1.41
ATM-223	ENST00000533979	TBR1	Q16650	682 aa		6.24	□□□□□ -1.41
ATM-223	ENST00000533979	AGBL4	Q5VU57	503 aa		6.24	□□□□□ -1.41
ATM-223	ENST00000533979	MTFR1L	Q9H019	292 aa		6.24	□□□□□ -1.41
ATM-223	ENST00000533979	PUF60	Q9UHX1	559 aa	Known RBP	6.24	□□□□□ -1.41
ATM-223	ENST00000533979	ERCC6	Q03468	1493 aa		6.23	□□□□□ -1.41
ATM-223	ENST00000533979	MATN2	O00339	956 aa		6.23	□□□□□ -1.41
ATM-223	ENST00000533979	RPS19	P39019	145 aa	Known RBP	6.23	□□□□□ -1.41
ATM-223	ENST00000533979	SELENOP	P49908	381 aa		6.23	□□□□□ -1.41
ATM-223	ENST00000533979	SESN2	P58004	480 aa	Predicted RBP	6.23	□□□□□ -1.41
ATM-223	ENST00000533979	ROM1	Q03395	351 aa		6.23	□□□□□ -1.41
ATM-223	ENST00000533979	EPHA7	Q15375	998 aa		6.23	□□□□□ -1.41
ATM-223	ENST00000533979	ZNF585A	Q6P3V2	769 aa		6.23	□□□□□ -1.41
ATM-223	ENST00000533979	RTKN2	Q8IZC4	609 aa		6.23	□□□□□ -1.41
ATM-223	ENST00000533979	BCL6B	Q8N143	479 aa	Predicted RBP	6.23	□□□□□ -1.41
ATM-223	ENST00000533979	EDA	Q92838	391 aa		6.23	□□□□□ -1.41
ATM-223	ENST00000533979	NINJ1	Q92982	152 aa		6.23	□□□□□ -1.41
ATM-223	ENST00000533979	LPP	Q93052	612 aa		6.23	□□□□□ -1.41
ATM-223	ENST00000533979	NELFA	Q9H3P2	528 aa		6.23	□□□□□ -1.41
ATM-223	ENST00000533979	TYW1	Q9NV66	732 aa	Known RBP	6.23	□□□□□ -1.41
ATM-223	ENST00000533979	OAZ3	Q9UMX2	235 aa		6.23	□□□□□ -1.41
ATM-223	ENST00000533979	G3BP2	Q9UN86	482 aa	Known RBP	6.23	□□□□□ -1.41
ATM-223	ENST00000533979	ZKSCAN5	Q9Y2L8	839 aa		6.23	□□□□□ -1.41
ATM-223	ENST00000533979	SPO11	Q9Y5K1	396 aa		6.23	□□□□□ -1.41
ATM-223	ENST00000533979	CC2D2A	Q9P2K1	1620 aa		6.23	□□□□□ -1.41
ATM-223	ENST00000533979	RAD17	O75943	681 aa		6.22	□□□□□ -1.41
ATM-223	ENST00000533979	PDGFRB	P09619	1106 aa		6.22	□□□□□ -1.41
ATM-223	ENST00000533979	SLC6A3	Q01959	620 aa		6.22	□□□□□ -1.41
ATM-223	ENST00000533979	R3HDM1	Q15032	1099 aa	Known RBP	6.22	□□□□□ -1.41
ATM-223	ENST00000533979	TTC38	Q5R3I4	469 aa		6.22	□□□□□ -1.41
ATM-223	ENST00000533979	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	6.22	□□□□□ -1.41
ATM-223	ENST00000533979	KIAA1958	Q8N8K9	716 aa		6.22	□□□□□ -1.41
ATM-223	ENST00000533979	C12orf65	Q9H3J6	166 aa	Known RBP	6.22	□□□□□ -1.41
ATM-223	ENST00000533979	PCIF1	Q9H4Z3	704 aa		6.22	□□□□□ -1.41
ATM-223	ENST00000533979	SAE1	Q9UBE0	346 aa	Predicted RBP	6.22	□□□□□ -1.41
ATM-223	ENST00000533979	CD2AP	Q9Y5K6	639 aa		6.22	□□□□□ -1.41
ATM-223	ENST00000533979	CDC14B	O60729	498 aa		6.21	□□□□□ -1.42
ATM-223	ENST00000533979	H2AFY	O75367	372 aa	Known RBP	6.21	□□□□□ -1.42
ATM-223	ENST00000533979	PEX14	O75381	377 aa		6.21	□□□□□ -1.42
ATM-223	ENST00000533979	F2	P00734	622 aa		6.21	□□□□□ -1.42
ATM-223	ENST00000533979	PRL	P01236	227 aa		6.21	□□□□□ -1.42
ATM-223	ENST00000533979	SLC9A1	P19634	815 aa		6.21	□□□□□ -1.42
ATM-223	ENST00000533979	COMT	P21964	271 aa		6.21	□□□□□ -1.42
ATM-223	ENST00000533979	HGFAC	Q04756	655 aa		6.21	□□□□□ -1.42
ATM-223	ENST00000533979		Q6ZSN1	163 aa		6.21	□□□□□ -1.42
ATM-223	ENST00000533979	FUK	Q8N0W3	1084 aa		6.21	□□□□□ -1.42
ATM-223	ENST00000533979	AHI1	Q8N157	1196 aa		6.21	□□□□□ -1.42
ATM-223	ENST00000533979	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	6.21	□□□□□ -1.42
ATM-223	ENST00000533979	CFHR4	Q92496	578 aa		6.21	□□□□□ -1.42
ATM-223	ENST00000533979	GFM2	Q969S9	779 aa	Known RBP	6.21	□□□□□ -1.42
ATM-223	ENST00000533979	ELF4	Q99607	663 aa	Predicted RBP	6.21	□□□□□ -1.42
ATM-223	ENST00000533979	SLC30A1	Q9Y6M5	507 aa		6.21	□□□□□ -1.42
ATM-223	ENST00000533979	UBA6	A0AVT1	1052 aa	Predicted RBP	6.2	□□□□□ -1.42
ATM-223	ENST00000533979	MUSK	O15146	869 aa		6.2	□□□□□ -1.42
ATM-223	ENST00000533979	MATN3	O15232	486 aa		6.2	□□□□□ -1.42
ATM-223	ENST00000533979	MAFG	O15525	162 aa		6.2	□□□□□ -1.42
ATM-223	ENST00000533979	TNFRSF1A	P19438	455 aa		6.2	□□□□□ -1.42
ATM-223	ENST00000533979	PTX3	P26022	381 aa	Predicted RBP	6.2	□□□□□ -1.42
ATM-223	ENST00000533979	RGS3	P49796	1198 aa		6.2	□□□□□ -1.42
ATM-223	ENST00000533979	NEK4	P51957	841 aa		6.2	□□□□□ -1.42
ATM-223	ENST00000533979	GYS2	P54840	703 aa		6.2	□□□□□ -1.42
ATM-223	ENST00000533979	BCAR1	P56945	870 aa		6.2	□□□□□ -1.42
ATM-223	ENST00000533979	ANTXR2	P58335	489 aa		6.2	□□□□□ -1.42
ATM-223	ENST00000533979	DUSP8	Q13202	625 aa		6.2	□□□□□ -1.42
ATM-223	ENST00000533979	DGKD	Q16760	1214 aa		6.2	□□□□□ -1.42
ATM-223	ENST00000533979	KLHDC10	Q6PID8	442 aa		6.2	□□□□□ -1.42
ATM-223	ENST00000533979	LRRTM3	Q86VH5	581 aa		6.2	□□□□□ -1.42
ATM-223	ENST00000533979	ZZZ3	Q8IYH5	903 aa		6.2	□□□□□ -1.42
ATM-223	ENST00000533979	MORC4	Q8TE76	937 aa		6.2	□□□□□ -1.42
ATM-223	ENST00000533979	TUBGCP5	Q96RT8	1024 aa		6.2	□□□□□ -1.42
ATM-223	ENST00000533979	DPYSL5	Q9BPU6	564 aa		6.2	□□□□□ -1.42
ATM-223	ENST00000533979	KIAA1683	Q9H0B3	1180 aa		6.2	□□□□□ -1.42
ATM-223	ENST00000533979	OXSM	Q9NWU1	459 aa		6.2	□□□□□ -1.42
ATM-223	ENST00000533979	KCMF1	Q9P0J7	381 aa		6.2	□□□□□ -1.42
ATM-223	ENST00000533979	CTDP1	Q9Y5B0	961 aa	Predicted RBP	6.2	□□□□□ -1.42
ATM-223	ENST00000533979	FAM83G	A6ND36	823 aa		6.19	□□□□□ -1.42
ATM-223	ENST00000533979	ATP2A2	P16615	1042 aa	Known RBP	6.19	□□□□□ -1.42
ATM-223	ENST00000533979	STAT5B	P51692	787 aa		6.19	□□□□□ -1.42
ATM-223	ENST00000533979	ADCY7	P51828	1080 aa		6.19	□□□□□ -1.42
ATM-223	ENST00000533979	PRKD1	Q15139	912 aa	Predicted RBP	6.19	□□□□□ -1.42
ATM-223	ENST00000533979	C21orf62-AS1	Q17RA5	79 aa		6.19	□□□□□ -1.42
ATM-223	ENST00000533979	SLFN12L	Q6IEE8	588 aa		6.19	□□□□□ -1.42
ATM-223	ENST00000533979	TIGD7	Q6NT04	549 aa	Predicted RBP	6.19	□□□□□ -1.42
ATM-223	ENST00000533979	MAMDC4	Q6UXC1	1216 aa		6.19	□□□□□ -1.42
ATM-223	ENST00000533979	POLN	Q7Z5Q5	900 aa		6.19	□□□□□ -1.42
ATM-223	ENST00000533979	SPRED1	Q7Z699	444 aa		6.19	□□□□□ -1.42
ATM-223	ENST00000533979	PASD1	Q8IV76	773 aa		6.19	□□□□□ -1.42
ATM-223	ENST00000533979	JDP2	Q8WYK2	163 aa		6.19	□□□□□ -1.42
ATM-223	ENST00000533979	RABGGTA	Q92696	567 aa		6.19	□□□□□ -1.42
ATM-223	ENST00000533979	PLA2G12B	Q9BX93	195 aa		6.19	□□□□□ -1.42
ATM-223	ENST00000533979	SLC6A15	Q9H2J7	730 aa		6.19	□□□□□ -1.42
ATM-223	ENST00000533979	GABBR1	Q9UBS5	961 aa		6.19	□□□□□ -1.42
ATM-223	ENST00000533979	DENND2A	Q9ULE3	1009 aa		6.19	□□□□□ -1.42
ATM-223	ENST00000533979	FAM184B	Q9ULE4	1060 aa		6.19	□□□□□ -1.42
ATM-223	ENST00000533979	GAS7	O60861	476 aa		6.18	□□□□□ -1.42
ATM-223	ENST00000533979	MASP1	P48740	699 aa		6.18	□□□□□ -1.42
ATM-223	ENST00000533979	ADAM15	Q13444	863 aa		6.18	□□□□□ -1.42
ATM-223	ENST00000533979	LRRC32	Q14392	662 aa		6.18	□□□□□ -1.42
ATM-223	ENST00000533979	TKFC	Q3LXA3	575 aa		6.18	□□□□□ -1.42

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