RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 SLC12A6Q9UHW9 1150 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 TPX2Q9ULW0 747 aaKnown RBP4.34□□□□□ -1.71
SOX6-217ENST00000533870 BUB1O43683 1085 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 DIAPH2O60879 1101 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 EYA4O95677 639 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 CHRM1P11229 460 aaPredicted RBP4.34□□□□□ -1.71
SOX6-217ENST00000533870 HARSP12081 509 aaKnown RBP4.34□□□□□ -1.71
SOX6-217ENST00000533870 MSH2P43246 934 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 PTENP60484 403 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 CDR2Q01850 454 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 AP1B1Q10567 949 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 BZW1Q7L1Q6 419 aaKnown RBP4.34□□□□□ -1.71
SOX6-217ENST00000533870 LARGE2Q8N3Y3 721 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 MTBPQ96DY7 904 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 SNF8Q96H20 258 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 RNPC3Q96LT9 517 aaKnown RBP4.34□□□□□ -1.71
SOX6-217ENST00000533870 RBM12Q9NTZ6 932 aaKnown RBP4.34□□□□□ -1.71
SOX6-217ENST00000533870 BARHL2Q9NY43 387 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 STRIP2Q9ULQ0 834 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 XDHP47989 1333 aa4.34□□□□□ -1.71
SOX6-217ENST00000533870 SNX3O60493 162 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 KRT5P13647 590 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 GARSP41250 739 aaKnown RBP4.34□□□□□ -1.72
SOX6-217ENST00000533870 MYL6P60660 151 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 SLC39A6Q13433 755 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 ACVR2BQ13705 512 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 SGO2Q562F6 1265 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 GALNT15Q8N3T1 639 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 PUS7LQ9H0K6 701 aaKnown RBP4.34□□□□□ -1.72
SOX6-217ENST00000533870 AVENQ9NQS1 362 aaPredicted RBP4.34□□□□□ -1.72
SOX6-217ENST00000533870 WHRNQ9P202 907 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 SORBS3O60504 671 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 ZBED4O75132 1171 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 PALMO75781 387 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 PLCG1P19174 1290 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 PRCPP42785 496 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 IGBP1P78318 339 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 BFSP1Q12934 665 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 STILQ15468 1287 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 MAP7D1Q3KQU3 841 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 CYB5RLQ6IPT4 315 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 XRRA1Q6P2D8 792 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 CHST3Q7LGC8 479 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 CMTR1Q8N1G2 835 aaKnown RBP4.34□□□□□ -1.72
SOX6-217ENST00000533870 RAB3IL1Q8TBN0 382 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 CDHR1Q96JP9 859 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 CSRNP1Q96S65 589 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 IRX2Q9BZI1 471 aaPredicted RBP4.34□□□□□ -1.72
SOX6-217ENST00000533870 DHX33Q9H6R0 707 aaKnown RBP4.34□□□□□ -1.72
SOX6-217ENST00000533870 KANSL2Q9H9L4 492 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 RXFP1Q9HBX9 757 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 OLFML3Q9NRN5 406 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 DDX56Q9NY93 547 aaKnown RBP4.34□□□□□ -1.72
SOX6-217ENST00000533870 FETUBQ9UGM5 382 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 NAGPAQ9UK23 515 aa4.34□□□□□ -1.72
SOX6-217ENST00000533870 SPATA31D1Q6ZQQ2 1576 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 C6orf229H3BNL8 230 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 CALB1P05937 261 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 HSD17B3P37058 310 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 HADHBP55084 474 aaKnown RBP4.33□□□□□ -1.72
SOX6-217ENST00000533870 NUP107P57740 925 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 BIRC2Q13490 618 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 EPHA10Q5JZY3 1008 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 RNF43Q68DV7 783 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 RPGRQ92834 1020 aaKnown RBP4.33□□□□□ -1.72
SOX6-217ENST00000533870 ZKSCAN4Q969J2 545 aaPredicted RBP4.33□□□□□ -1.72
SOX6-217ENST00000533870 ZFRQ96KR1 1074 aaKnown RBP4.33□□□□□ -1.72
SOX6-217ENST00000533870 MAGEB18Q96M61 343 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 ZSWIM1Q9BR11 485 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 DDX47Q9H0S4 455 aaKnown RBP4.33□□□□□ -1.72
SOX6-217ENST00000533870 LRMDAQ9H2I8 198 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 MROH7-TTC4A0A0A0MT08 1334 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 FAM205AQ6ZU69 1335 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 DEPDC5O75140 1603 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 LOC102724159A0A0B4J2E5 919 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 KLHL33A6NCF5 533 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 GSG1L2A8MUP6 293 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 BIRC5O15392 142 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 MOCS3O95396 460 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 ADAMTS2O95450 1211 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 GUCY1A3Q02108 690 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 C2orf54Q08AI8 447 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 PWP2Q15269 919 aaKnown RBP4.33□□□□□ -1.72
SOX6-217ENST00000533870 TPH2Q8IWU9 490 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 RHOT1Q8IXI2 618 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 FAM178BQ8IXR5 827 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 SCYL3Q8IZE3 742 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 ZMAT2Q96NC0 199 aaKnown RBP4.33□□□□□ -1.72
SOX6-217ENST00000533870 ACCSQ96QU6 501 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 C10orf88Q9H8K7 445 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 PANK4Q9NVE7 773 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 SATB2Q9UPW6 733 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 IQGAP1P46940 1657 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 UNC5CO95185 931 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 HOXB8P17481 243 aaPredicted RBP4.33□□□□□ -1.72
SOX6-217ENST00000533870 ACADVLP49748 655 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 MTF1Q14872 753 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 NFIL3Q16649 462 aa4.33□□□□□ -1.72
SOX6-217ENST00000533870 CCDC92Q53HC0 331 aaPredicted RBP4.33□□□□□ -1.72
SOX6-217ENST00000533870 CC2D2BQ6DHV5 1058 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms