RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 NACC1Q96RE7 527 aa17.66■□□□□ 0.42
TSKU-204ENST00000533752 MTRQ99707 1265 aa17.66■□□□□ 0.42
TSKU-204ENST00000533752 INO80BQ9C086 356 aaPredicted RBP17.66■□□□□ 0.42
TSKU-204ENST00000533752 CDHR5Q9HBB8 845 aa17.66■□□□□ 0.42
TSKU-204ENST00000533752 ATP6V0A4Q9HBG4 840 aa17.66■□□□□ 0.42
TSKU-204ENST00000533752 C1orf112Q9NSG2 853 aa17.66■□□□□ 0.42
TSKU-204ENST00000533752 LRWD1Q9UFC0 647 aa17.66■□□□□ 0.42
TSKU-204ENST00000533752 DENND3A2RUS2 1198 aa17.65■□□□□ 0.42
TSKU-204ENST00000533752 HSP90AA1P07900 732 aaKnown RBP17.65■□□□□ 0.42
TSKU-204ENST00000533752 STAG3L1P0CL83 205 aa17.65■□□□□ 0.42
TSKU-204ENST00000533752 SPATA31C1P0DKV0 1188 aa17.65■□□□□ 0.42
TSKU-204ENST00000533752 PDIA4P13667 645 aaKnown RBP17.65■□□□□ 0.42
TSKU-204ENST00000533752 SYT1P21579 422 aa17.65■□□□□ 0.42
TSKU-204ENST00000533752 SFPQP23246 707 aaKnown RBP eCLIP17.65■□□□□ 0.42
TSKU-204ENST00000533752 RARRES1P49788 294 aa17.65■□□□□ 0.42
TSKU-204ENST00000533752 ARL6IP4Q66PJ3 421 aaKnown RBP17.65■□□□□ 0.42
TSKU-204ENST00000533752 FAM117BQ6P1L5 589 aa17.65■□□□□ 0.42
TSKU-204ENST00000533752 RHPN2Q8IUC4 686 aa17.65■□□□□ 0.42
TSKU-204ENST00000533752 NPAS4Q8IUM7 802 aa17.65■□□□□ 0.42
TSKU-204ENST00000533752 GAS2L1Q99501 681 aaPredicted RBP17.65■□□□□ 0.42
TSKU-204ENST00000533752 DBR1Q9UK59 544 aaKnown RBP17.65■□□□□ 0.42
TSKU-204ENST00000533752 COL4A3BPQ9Y5P4 624 aa17.65■□□□□ 0.42
TSKU-204ENST00000533752 CHD9Q3L8U1 2897 aa17.65■□□□□ 0.42
TSKU-204ENST00000533752 ARID2Q68CP9 1835 aa17.64■□□□□ 0.41
TSKU-204ENST00000533752 ASAP2O43150 1006 aa17.64■□□□□ 0.41
TSKU-204ENST00000533752 MED24O75448 989 aa17.64■□□□□ 0.41
TSKU-204ENST00000533752 UPP2O95045 317 aa17.64■□□□□ 0.41
TSKU-204ENST00000533752 FOSL2P15408 326 aa17.64■□□□□ 0.41
TSKU-204ENST00000533752 CCT6AP40227 531 aaKnown RBP17.64■□□□□ 0.41
TSKU-204ENST00000533752 TAP1Q03518 808 aa17.64■□□□□ 0.41
TSKU-204ENST00000533752 MXD4Q14582 209 aaPredicted RBP17.64■□□□□ 0.41
TSKU-204ENST00000533752 ZNF579Q8NAF0 562 aaKnown RBP17.64■□□□□ 0.41
TSKU-204ENST00000533752 SP7Q8TDD2 431 aaPredicted RBP17.64■□□□□ 0.41
TSKU-204ENST00000533752 LINC01599Q8WXQ3 324 aa17.64■□□□□ 0.41
TSKU-204ENST00000533752 NLRP4Q96MN2 994 aa17.64■□□□□ 0.41
TSKU-204ENST00000533752 TMX1Q9H3N1 280 aa17.64■□□□□ 0.41
TSKU-204ENST00000533752 LCHNA4D1U4 455 aa17.63■□□□□ 0.41
TSKU-204ENST00000533752 ZBTB39O15060 712 aa17.63■□□□□ 0.41
TSKU-204ENST00000533752 ZSCAN20P17040 1043 aaPredicted RBP17.63■□□□□ 0.41
TSKU-204ENST00000533752 SARSP49591 514 aaKnown RBP17.63■□□□□ 0.41
TSKU-204ENST00000533752 KRT79Q5XKE5 535 aa17.63■□□□□ 0.41
TSKU-204ENST00000533752 POTEGQ6S5H5 508 aa17.63■□□□□ 0.41
TSKU-204ENST00000533752 SLC24A5Q71RS6 500 aa17.63■□□□□ 0.41
TSKU-204ENST00000533752 MCPH1Q8NEM0 835 aa17.63■□□□□ 0.41
TSKU-204ENST00000533752 SNX29Q8TEQ0 813 aa17.63■□□□□ 0.41
TSKU-204ENST00000533752 PIGOQ8TEQ8 1089 aa17.63■□□□□ 0.41
TSKU-204ENST00000533752 MYLIPQ8WY64 445 aa17.63■□□□□ 0.41
TSKU-204ENST00000533752 TMEM143Q96AN5 459 aa17.63■□□□□ 0.41
TSKU-204ENST00000533752 SAMD11Q96NU1 681 aa17.63■□□□□ 0.41
TSKU-204ENST00000533752 TGS1Q96RS0 853 aaKnown RBP17.63■□□□□ 0.41
TSKU-204ENST00000533752 ADAM2Q99965 735 aa17.63■□□□□ 0.41
TSKU-204ENST00000533752 RGS18Q9NS28 235 aa17.63■□□□□ 0.41
TSKU-204ENST00000533752 TTC3P53804 2025 aa17.63■□□□□ 0.41
TSKU-204ENST00000533752 LOXHD1Q8IVV2 1947 aa17.62■□□□□ 0.41
TSKU-204ENST00000533752 CDH23Q9H251 3354 aa17.62■□□□□ 0.41
TSKU-204ENST00000533752 A0A087WZ62 844 aa17.62■□□□□ 0.41
TSKU-204ENST00000533752 LAMTOR4Q0VGL1 99 aa17.62■□□□□ 0.41
TSKU-204ENST00000533752 TFDP1Q14186 410 aa17.62■□□□□ 0.41
TSKU-204ENST00000533752 FERMT3Q86UX7 667 aa17.62■□□□□ 0.41
TSKU-204ENST00000533752 KCTD17Q8N5Z5 321 aa17.62■□□□□ 0.41
TSKU-204ENST00000533752 PRPF31Q8WWY3 499 aaKnown RBP17.62■□□□□ 0.41
TSKU-204ENST00000533752 ZNF668Q96K58 619 aaPredicted RBP17.62■□□□□ 0.41
TSKU-204ENST00000533752 FDXACB1Q9BRP7 624 aaPredicted RBP17.62■□□□□ 0.41
TSKU-204ENST00000533752 PRDM12Q9H4Q4 367 aa17.62■□□□□ 0.41
TSKU-204ENST00000533752 BMP2KQ9NSY1 1161 aaPredicted RBP17.62■□□□□ 0.41
TSKU-204ENST00000533752 FOXD4L1Q9NU39 408 aa17.62■□□□□ 0.41
TSKU-204ENST00000533752 DACT1Q9NYF0 836 aa17.62■□□□□ 0.41
TSKU-204ENST00000533752 LRFN2Q9ULH4 789 aa17.62■□□□□ 0.41
TSKU-204ENST00000533752 ADGRA3Q8IWK6 1321 aa17.62■□□□□ 0.41
TSKU-204ENST00000533752 LINC01553A4QN01 128 aa17.61■□□□□ 0.41
TSKU-204ENST00000533752 ARHGEF35A5YM69 484 aa17.61■□□□□ 0.41
TSKU-204ENST00000533752 STX6O43752 255 aa17.61■□□□□ 0.41
TSKU-204ENST00000533752 USO1O60763 962 aaKnown RBP17.61■□□□□ 0.41
TSKU-204ENST00000533752 PHKA2P46019 1235 aa17.61■□□□□ 0.41
TSKU-204ENST00000533752 ERVK-21P61565 698 aa17.61■□□□□ 0.41
TSKU-204ENST00000533752 DSC3Q14574 896 aa17.61■□□□□ 0.41
TSKU-204ENST00000533752 PCBP1Q15365 356 aaKnown RBP eCLIP17.61■□□□□ 0.41
TSKU-204ENST00000533752 SRGAP1Q7Z6B7 1085 aa17.61■□□□□ 0.41
TSKU-204ENST00000533752 RTN4RL1Q86UN2 441 aaPredicted RBP17.61■□□□□ 0.41
TSKU-204ENST00000533752 ARNTL2Q8WYA1 636 aa17.61■□□□□ 0.41
TSKU-204ENST00000533752 AK8Q96MA6 479 aa17.61■□□□□ 0.41
TSKU-204ENST00000533752 ZSCAN16Q9H4T2 348 aaPredicted RBP17.61■□□□□ 0.41
TSKU-204ENST00000533752 XPNPEP1Q9NQW7 623 aa17.61■□□□□ 0.41
TSKU-204ENST00000533752 CHST12Q9NRB3 414 aa17.61■□□□□ 0.41
TSKU-204ENST00000533752 MTMR6Q9Y217 621 aa17.61■□□□□ 0.41
TSKU-204ENST00000533752 RWDD3Q9Y3V2 267 aa17.61■□□□□ 0.41
TSKU-204ENST00000533752 PCDHB7Q9Y5E2 793 aa17.61■□□□□ 0.41
TSKU-204ENST00000533752 VWA3AA6NCI4 1184 aa17.6■□□□□ 0.41
TSKU-204ENST00000533752 SLC26A4O43511 780 aa17.6■□□□□ 0.41
TSKU-204ENST00000533752 MGEA5O60502 916 aa17.6■□□□□ 0.41
TSKU-204ENST00000533752 ARHGEF15O94989 841 aa17.6■□□□□ 0.41
TSKU-204ENST00000533752 POU5F1BQ06416 359 aa17.6■□□□□ 0.41
TSKU-204ENST00000533752 RESTQ13127 1097 aa17.6■□□□□ 0.41
TSKU-204ENST00000533752 KSR1Q8IVT5 923 aa17.6■□□□□ 0.41
TSKU-204ENST00000533752 CMTR2Q8IYT2 770 aaKnown RBP17.6■□□□□ 0.41
TSKU-204ENST00000533752 FIBCD1Q8N539 461 aa17.6■□□□□ 0.41
TSKU-204ENST00000533752 RNF149Q8NC42 400 aa17.6■□□□□ 0.41
TSKU-204ENST00000533752 ELAC1Q9H777 363 aaKnown RBP17.6■□□□□ 0.41
TSKU-204ENST00000533752 RC3H2Q9HBD1 1191 aaKnown RBP17.6■□□□□ 0.41
TSKU-204ENST00000533752 IFT122Q9HBG6 1241 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms