RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 SRGAP2CP0DJJ0 459 aa19.36■□□□□ 0.69
NXF1-216ENST00000533499 MRPS6P82932 125 aaKnown RBP19.36■□□□□ 0.69
NXF1-216ENST00000533499 FAM160A1Q05DH4 1040 aa19.36■□□□□ 0.69
NXF1-216ENST00000533499 MKRN4PQ13434 485 aaPredicted RBP19.36■□□□□ 0.69
NXF1-216ENST00000533499 ZNF618Q5T7W0 954 aa19.36■□□□□ 0.69
NXF1-216ENST00000533499 C1orf186Q6ZWK4 172 aa19.36■□□□□ 0.69
NXF1-216ENST00000533499 KSR1Q8IVT5 923 aa19.36■□□□□ 0.69
NXF1-216ENST00000533499 GRAMD1CQ8IYS0 662 aa19.36■□□□□ 0.69
NXF1-216ENST00000533499 CAGE1Q8TC20 777 aa19.36■□□□□ 0.69
NXF1-216ENST00000533499 PRPF31Q8WWY3 499 aaKnown RBP19.36■□□□□ 0.69
NXF1-216ENST00000533499 NLRP7Q8WX94 980 aa19.36■□□□□ 0.69
NXF1-216ENST00000533499 NLRP4Q96MN2 994 aa19.36■□□□□ 0.69
NXF1-216ENST00000533499 TBX21Q9UL17 535 aa19.36■□□□□ 0.69
NXF1-216ENST00000533499 NR2E3Q9Y5X4 410 aa19.36■□□□□ 0.69
NXF1-216ENST00000533499 IGKV6-21A0A0C4DH24 114 aa19.35■□□□□ 0.69
NXF1-216ENST00000533499 TRIM43BA6NCK2 446 aa19.35■□□□□ 0.69
NXF1-216ENST00000533499 SFI1A8K8P3 1242 aa19.35■□□□□ 0.69
NXF1-216ENST00000533499 GAS2O43903 313 aaKnown RBP19.35■□□□□ 0.69
NXF1-216ENST00000533499 KINO60870 393 aaKnown RBP19.35■□□□□ 0.69
NXF1-216ENST00000533499 FAM13AO94988 1023 aa19.35■□□□□ 0.69
NXF1-216ENST00000533499 SLFN14P0C7P3 912 aa19.35■□□□□ 0.69
NXF1-216ENST00000533499 CKBP12277 381 aa19.35■□□□□ 0.69
NXF1-216ENST00000533499 IDEP14735 1019 aa19.35■□□□□ 0.69
NXF1-216ENST00000533499 NLRP11P59045 1033 aaKnown RBP19.35■□□□□ 0.69
NXF1-216ENST00000533499 AMPD3Q01432 767 aa19.35■□□□□ 0.69
NXF1-216ENST00000533499 KIZQ2M2Z5 673 aa19.35■□□□□ 0.69
NXF1-216ENST00000533499 NME8Q8N427 588 aa19.35■□□□□ 0.69
NXF1-216ENST00000533499 TRIM43Q96BQ3 446 aaPredicted RBP19.35■□□□□ 0.69
NXF1-216ENST00000533499 CCDC34Q96HJ3 373 aa19.35■□□□□ 0.69
NXF1-216ENST00000533499 LRRC27Q9C0I9 530 aa19.35■□□□□ 0.69
NXF1-216ENST00000533499 BLZF1Q9H2G9 400 aa19.35■□□□□ 0.69
NXF1-216ENST00000533499 LMBRD1Q9NUN5 540 aa19.35■□□□□ 0.69
NXF1-216ENST00000533499 USP25Q9UHP3 1055 aa19.35■□□□□ 0.69
NXF1-216ENST00000533499 COL4A3BPQ9Y5P4 624 aa19.35■□□□□ 0.69
NXF1-216ENST00000533499 CDY2AQ9Y6F7 541 aa19.35■□□□□ 0.69
NXF1-216ENST00000533499 DNAH12Q6ZR08 3092 aa19.34■□□□□ 0.69
NXF1-216ENST00000533499 FAM237AA0A1B0GTK4 181 aa19.34■□□□□ 0.69
NXF1-216ENST00000533499 MYMKA6NI61 221 aa19.34■□□□□ 0.69
NXF1-216ENST00000533499 RSPH10B2B2RC85 870 aa19.34■□□□□ 0.69
NXF1-216ENST00000533499 ACTN4O43707 911 aaKnown RBP19.34■□□□□ 0.69
NXF1-216ENST00000533499 NR1I2O75469 434 aa19.34■□□□□ 0.69
NXF1-216ENST00000533499 RSPH10BP0C881 870 aa19.34■□□□□ 0.69
NXF1-216ENST00000533499 SELPP16109 830 aa19.34■□□□□ 0.69
NXF1-216ENST00000533499 ASIC1P78348 528 aa19.34■□□□□ 0.69
NXF1-216ENST00000533499 LAMTOR4Q0VGL1 99 aa19.34■□□□□ 0.69
NXF1-216ENST00000533499 TRIM71Q2Q1W2 868 aaKnown RBP19.34■□□□□ 0.69
NXF1-216ENST00000533499 ARSHQ5FYA8 562 aa19.34■□□□□ 0.69
NXF1-216ENST00000533499 KRBA2Q6ZNG9 492 aa19.34■□□□□ 0.69
NXF1-216ENST00000533499 LRRC8DQ7L1W4 858 aa19.34■□□□□ 0.69
NXF1-216ENST00000533499 LINC01465Q8N7H1 131 aa19.34■□□□□ 0.69
NXF1-216ENST00000533499 ASAP3Q8TDY4 903 aa19.34■□□□□ 0.69
NXF1-216ENST00000533499 DDX12PQ92771 950 aa19.34■□□□□ 0.69
NXF1-216ENST00000533499 SCLYQ96I15 445 aa19.34■□□□□ 0.69
NXF1-216ENST00000533499 IFT74Q96LB3 600 aa19.34■□□□□ 0.69
NXF1-216ENST00000533499 DRC1Q96MC2 740 aa19.34■□□□□ 0.69
NXF1-216ENST00000533499 REEP2Q9BRK0 252 aa19.34■□□□□ 0.69
NXF1-216ENST00000533499 TNMDQ9H2S6 317 aa19.34■□□□□ 0.69
NXF1-216ENST00000533499 MAGEF1Q9HAY2 307 aa19.34■□□□□ 0.69
NXF1-216ENST00000533499 TRPV2Q9Y5S1 764 aa19.34■□□□□ 0.69
NXF1-216ENST00000533499 LRRIQ4A6NIV6 560 aa19.33■□□□□ 0.68
NXF1-216ENST00000533499 CCDC169A6NNP5 214 aa19.33■□□□□ 0.68
NXF1-216ENST00000533499 RBAK-RBAKDNI3L0D1 243 aa19.33■□□□□ 0.68
NXF1-216ENST00000533499 KIAA0355O15063 1070 aa19.33■□□□□ 0.68
NXF1-216ENST00000533499 RPLP2P05387 115 aaKnown RBP19.33■□□□□ 0.68
NXF1-216ENST00000533499 CASP1P29466 404 aa19.33■□□□□ 0.68
NXF1-216ENST00000533499 TFDP1Q14186 410 aa19.33■□□□□ 0.68
NXF1-216ENST00000533499 FMR1NBQ8N0W7 255 aaPredicted RBP19.33■□□□□ 0.68
NXF1-216ENST00000533499 KIFAP3Q92845 792 aa19.33■□□□□ 0.68
NXF1-216ENST00000533499 PAGE5Q96GU1 130 aa19.33■□□□□ 0.68
NXF1-216ENST00000533499 OSMRQ99650 979 aa19.33■□□□□ 0.68
NXF1-216ENST00000533499 CELF4Q9BZC1 486 aaKnown RBP19.33■□□□□ 0.68
NXF1-216ENST00000533499 KCND2Q9NZV8 630 aa19.33■□□□□ 0.68
NXF1-216ENST00000533499 MYH11P35749 1972 aa19.33■□□□□ 0.68
NXF1-216ENST00000533499 A0A087WZ62 844 aa19.32■□□□□ 0.68
NXF1-216ENST00000533499 PITPNM1O00562 1244 aa19.32■□□□□ 0.68
NXF1-216ENST00000533499 TIMP1P01033 207 aa19.32■□□□□ 0.68
NXF1-216ENST00000533499 CHRNA1P02708 482 aa19.32■□□□□ 0.68
NXF1-216ENST00000533499 GLRA2P23416 452 aa19.32■□□□□ 0.68
NXF1-216ENST00000533499 GUCY2CP25092 1073 aa19.32■□□□□ 0.68
NXF1-216ENST00000533499 MCM4P33991 863 aa19.32■□□□□ 0.68
NXF1-216ENST00000533499 ARL2P36404 184 aa19.32■□□□□ 0.68
NXF1-216ENST00000533499 PEX3P56589 373 aa19.32■□□□□ 0.68
NXF1-216ENST00000533499 GIT2Q14161 759 aa19.32■□□□□ 0.68
NXF1-216ENST00000533499 MXD4Q14582 209 aaPredicted RBP19.32■□□□□ 0.68
NXF1-216ENST00000533499 MYCT1Q8N699 235 aa19.32■□□□□ 0.68
NXF1-216ENST00000533499 RNF149Q8NC42 400 aa19.32■□□□□ 0.68
NXF1-216ENST00000533499 LBHD1Q9BQE6 289 aaPredicted RBP19.32■□□□□ 0.68
NXF1-216ENST00000533499 FDXACB1Q9BRP7 624 aaPredicted RBP19.32■□□□□ 0.68
NXF1-216ENST00000533499 TIPINQ9BVW5 301 aa19.32■□□□□ 0.68
NXF1-216ENST00000533499 CDHR5Q9HBB8 845 aa19.32■□□□□ 0.68
NXF1-216ENST00000533499 KBTBD4Q9NVX7 518 aa19.32■□□□□ 0.68
NXF1-216ENST00000533499 DACT1Q9NYF0 836 aa19.32■□□□□ 0.68
NXF1-216ENST00000533499 ASAP2O43150 1006 aa19.31■□□□□ 0.68
NXF1-216ENST00000533499 CAND2O75155 1236 aa19.31■□□□□ 0.68
NXF1-216ENST00000533499 GPC3P51654 580 aa19.31■□□□□ 0.68
NXF1-216ENST00000533499 SNW1Q13573 536 aaKnown RBP19.31■□□□□ 0.68
NXF1-216ENST00000533499 PPP2R5AQ15172 486 aa19.31■□□□□ 0.68
NXF1-216ENST00000533499 DEFB128Q7Z7B8 93 aa19.31■□□□□ 0.68
NXF1-216ENST00000533499 ENGASEQ8NFI3 743 aa19.31■□□□□ 0.68
NXF1-216ENST00000533499 DEPTORQ8TB45 409 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms