RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 MKL1Q969V6 931 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 NAP1L3Q99457 506 aaPredicted RBP18.05■□□□□ 0.48
CTSB-228ENST00000533455 TRIM51Q9BSJ1 452 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 RUSC1Q9BVN2 902 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 ZDHHC18Q9NUE0 388 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 VAV3Q9UKW4 847 aa18.05■□□□□ 0.48
CTSB-228ENST00000533455 FRMPD4Q14CM0 1322 aa18.04■□□□□ 0.48
CTSB-228ENST00000533455 DCDC2CA8MYV0 355 aa18.04■□□□□ 0.48
CTSB-228ENST00000533455 MPHOSPH10O00566 681 aaKnown RBP18.04■□□□□ 0.48
CTSB-228ENST00000533455 CHUKO15111 745 aa18.04■□□□□ 0.48
CTSB-228ENST00000533455 CLIC2O15247 247 aa18.04■□□□□ 0.48
CTSB-228ENST00000533455 HLA-DOAP06340 250 aa18.04■□□□□ 0.48
CTSB-228ENST00000533455 NUDT17P0C025 328 aa18.04■□□□□ 0.48
CTSB-228ENST00000533455 CIITAP33076 1130 aa18.04■□□□□ 0.48
CTSB-228ENST00000533455 PSMC2P35998 433 aaKnown RBP18.04■□□□□ 0.48
CTSB-228ENST00000533455 MMP14P50281 582 aa18.04■□□□□ 0.48
CTSB-228ENST00000533455 TAX1BP1Q86VP1 789 aa18.04■□□□□ 0.48
CTSB-228ENST00000533455 HOOK3Q86VS8 718 aa18.04■□□□□ 0.48
CTSB-228ENST00000533455 OSGEPQ9NPF4 335 aa18.04■□□□□ 0.48
CTSB-228ENST00000533455 USP40Q9NVE5 1235 aa18.04■□□□□ 0.48
CTSB-228ENST00000533455 PPP1R9AQ9ULJ8 1098 aa18.04■□□□□ 0.48
CTSB-228ENST00000533455 PCDHB13Q9Y5F0 798 aa18.04■□□□□ 0.48
CTSB-228ENST00000533455 IGSF9BQ9UPX0 1349 aa18.04■□□□□ 0.48
CTSB-228ENST00000533455 FOSP01100 380 aaPredicted RBP18.03■□□□□ 0.48
CTSB-228ENST00000533455 DRD4P21917 467 aa18.03■□□□□ 0.48
CTSB-228ENST00000533455 DHX34Q14147 1143 aaKnown RBP18.03■□□□□ 0.48
CTSB-228ENST00000533455 GLYCTKQ8IVS8 523 aa18.03■□□□□ 0.48
CTSB-228ENST00000533455 FAM186BQ8IYM0 893 aa18.03■□□□□ 0.48
CTSB-228ENST00000533455 BHMT2Q9H2M3 363 aa18.03■□□□□ 0.48
CTSB-228ENST00000533455 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.03■□□□□ 0.48
CTSB-228ENST00000533455 NR2E1Q9Y466 385 aa18.03■□□□□ 0.48
CTSB-228ENST00000533455 RBBP6Q7Z6E9 1792 aaKnown RBP18.03■□□□□ 0.48
CTSB-228ENST00000533455 GOLGA6L10A0A0M3HER8 536 aa18.03■□□□□ 0.48
CTSB-228ENST00000533455 PPP1R12BO60237 982 aaPredicted RBP18.03■□□□□ 0.48
CTSB-228ENST00000533455 GHRP10912 638 aa18.03■□□□□ 0.48
CTSB-228ENST00000533455 DR1Q01658 176 aa18.03■□□□□ 0.48
CTSB-228ENST00000533455 KCNA1Q09470 495 aa18.03■□□□□ 0.48
CTSB-228ENST00000533455 ERMARDQ5T6L9 678 aa18.03■□□□□ 0.48
CTSB-228ENST00000533455 CTNNBL1Q8WYA6 563 aaPredicted RBP18.03■□□□□ 0.48
CTSB-228ENST00000533455 CCDC114Q96M63 670 aa18.03■□□□□ 0.48
CTSB-228ENST00000533455 ERP44Q9BS26 406 aa18.03■□□□□ 0.48
CTSB-228ENST00000533455 FAM129AQ9BZQ8 928 aa18.03■□□□□ 0.48
CTSB-228ENST00000533455 GPR88Q9GZN0 384 aa18.03■□□□□ 0.48
CTSB-228ENST00000533455 EPB41L4BQ9H329 900 aa18.03■□□□□ 0.48
CTSB-228ENST00000533455 NYAP2Q9P242 653 aa18.03■□□□□ 0.48
CTSB-228ENST00000533455 DNAJC12Q9UKB3 198 aa18.03■□□□□ 0.48
CTSB-228ENST00000533455 RABGAP1Q9Y3P9 1069 aa18.03■□□□□ 0.48
CTSB-228ENST00000533455 UBE4BO95155 1302 aa18.02■□□□□ 0.48
CTSB-228ENST00000533455 FAM86B1E9PN63 330 aa18.02■□□□□ 0.48
CTSB-228ENST00000533455 MSH4O15457 936 aa18.02■□□□□ 0.48
CTSB-228ENST00000533455 FAM86B2P0C5J1 330 aa18.02■□□□□ 0.48
CTSB-228ENST00000533455 HOXA10P31260 410 aaPredicted RBP18.02■□□□□ 0.48
CTSB-228ENST00000533455 FMO5P49326 533 aa18.02■□□□□ 0.48
CTSB-228ENST00000533455 DRG2P55039 364 aaKnown RBP18.02■□□□□ 0.48
CTSB-228ENST00000533455 HADHBP55084 474 aaKnown RBP18.02■□□□□ 0.48
CTSB-228ENST00000533455 IFFO1Q0D2I5 559 aa18.02■□□□□ 0.48
CTSB-228ENST00000533455 DRAP1Q14919 205 aaPredicted RBP18.02■□□□□ 0.48
CTSB-228ENST00000533455 GKAP1Q5VSY0 366 aaPredicted RBP18.02■□□□□ 0.48
CTSB-228ENST00000533455 RPAINQ86UA6 219 aa18.02■□□□□ 0.48
CTSB-228ENST00000533455 NGLY1Q96IV0 654 aa18.02■□□□□ 0.48
CTSB-228ENST00000533455 XPO6Q96QU8 1125 aaKnown RBP18.02■□□□□ 0.48
CTSB-228ENST00000533455 COA1Q9GZY4 146 aa18.02■□□□□ 0.48
CTSB-228ENST00000533455 LRRC4CQ9HCJ2 640 aa18.02■□□□□ 0.48
CTSB-228ENST00000533455 ATP8A1Q9Y2Q0 1164 aa18.02■□□□□ 0.48
CTSB-228ENST00000533455 CCDC172P0C7W6 258 aa18.01■□□□□ 0.47
CTSB-228ENST00000533455 KLRC3Q07444 240 aa18.01■□□□□ 0.47
CTSB-228ENST00000533455 SPRED3Q2MJR0 410 aa18.01■□□□□ 0.47
CTSB-228ENST00000533455 SLFN13Q68D06 897 aa18.01■□□□□ 0.47
CTSB-228ENST00000533455 RINT1Q6NUQ1 792 aa18.01■□□□□ 0.47
CTSB-228ENST00000533455 CERS5Q8N5B7 392 aa18.01■□□□□ 0.47
CTSB-228ENST00000533455 PGM2Q96G03 612 aa18.01■□□□□ 0.47
CTSB-228ENST00000533455 EIF2AK1Q9BQI3 630 aaKnown RBP18.01■□□□□ 0.47
CTSB-228ENST00000533455 TACO1Q9BSH4 297 aaKnown RBP18.01■□□□□ 0.47
CTSB-228ENST00000533455 AMNQ9BXJ7 453 aa18.01■□□□□ 0.47
CTSB-228ENST00000533455 C6orf229H3BNL8 230 aa18.01■□□□□ 0.47
CTSB-228ENST00000533455 DNM1LO00429 736 aa18.01■□□□□ 0.47
CTSB-228ENST00000533455 CDC42EP5Q6NZY7 148 aa18.01■□□□□ 0.47
CTSB-228ENST00000533455 ZKSCAN4Q969J2 545 aaPredicted RBP18.01■□□□□ 0.47
CTSB-228ENST00000533455 CHMP6Q96FZ7 201 aa18.01■□□□□ 0.47
CTSB-228ENST00000533455 PABPC3Q9H361 631 aaKnown RBP18.01■□□□□ 0.47
CTSB-228ENST00000533455 KDM4CQ9H3R0 1056 aa18.01■□□□□ 0.47
CTSB-228ENST00000533455 BCAS3Q9H6U6 928 aa18.01■□□□□ 0.47
CTSB-228ENST00000533455 CAND2O75155 1236 aa18■□□□□ 0.47
CTSB-228ENST00000533455 TRIM37O94972 964 aa18■□□□□ 0.47
CTSB-228ENST00000533455 EEF2P13639 858 aaKnown RBP18■□□□□ 0.47
CTSB-228ENST00000533455 CYP4A11Q02928 519 aa18■□□□□ 0.47
CTSB-228ENST00000533455 NEK9Q8TD19 979 aa18■□□□□ 0.47
CTSB-228ENST00000533455 CCT6BQ92526 530 aa18■□□□□ 0.47
CTSB-228ENST00000533455 ARHGEF26Q96DR7 871 aa18■□□□□ 0.47
CTSB-228ENST00000533455 CRAMP1Q96RY5 1269 aa18■□□□□ 0.47
CTSB-228ENST00000533455 INTS2Q9H0H0 1204 aaKnown RBP18■□□□□ 0.47
CTSB-228ENST00000533455 DNAJC18Q9H819 358 aa18■□□□□ 0.47
CTSB-228ENST00000533455 ERVK-5Q9HDB9 667 aa18■□□□□ 0.47
CTSB-228ENST00000533455 UBR3Q6ZT12 1888 aa18■□□□□ 0.47
CTSB-228ENST00000533455 ANKRD62A6NC57 917 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 SPDYE3A6NKU9 549 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 F8W031 263 aaPredicted RBP17.99■□□□□ 0.47
CTSB-228ENST00000533455 FAM13AO94988 1023 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 CYP3A4P08684 503 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 HSPA6P17066 643 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms