RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 EMC2Q15006 297 aa22.82■■□□□ 1.24
CCS-208ENST00000533244 ODR4Q5SWX8 454 aa22.82■■□□□ 1.24
CCS-208ENST00000533244 POTEGQ6S5H5 508 aa22.82■■□□□ 1.24
CCS-208ENST00000533244 ZNF410Q86VK4 478 aa22.82■■□□□ 1.24
CCS-208ENST00000533244 FAM161BQ96MY7 647 aa22.82■■□□□ 1.24
CCS-208ENST00000533244 RAD9AQ99638 391 aa22.82■■□□□ 1.24
CCS-208ENST00000533244 TSPYL2Q9H2G4 693 aaPredicted RBP22.82■■□□□ 1.24
CCS-208ENST00000533244 SLC28A3Q9HAS3 691 aa22.82■■□□□ 1.24
CCS-208ENST00000533244 CHD7Q9P2D1 2997 aa22.82■■□□□ 1.24
CCS-208ENST00000533244 ST3GAL5Q9UNP4 418 aa22.82■■□□□ 1.24
CCS-208ENST00000533244 GPR182O15218 404 aa22.81■■□□□ 1.24
CCS-208ENST00000533244 STX6O43752 255 aa22.81■■□□□ 1.24
CCS-208ENST00000533244 ARHGEF15O94989 841 aa22.81■■□□□ 1.24
CCS-208ENST00000533244 ECM1Q16610 540 aa22.81■■□□□ 1.24
CCS-208ENST00000533244 CRIPAKQ8N1N5 446 aa22.81■■□□□ 1.24
CCS-208ENST00000533244 NACC1Q96RE7 527 aa22.81■■□□□ 1.24
CCS-208ENST00000533244 DGAT1O75907 488 aa22.8■■□□□ 1.24
CCS-208ENST00000533244 BMP15O95972 392 aa22.8■■□□□ 1.24
CCS-208ENST00000533244 NFX1Q12986 1120 aaKnown RBP22.8■■□□□ 1.24
CCS-208ENST00000533244 RHPN2Q8IUC4 686 aa22.8■■□□□ 1.24
CCS-208ENST00000533244 TCP11Q8WWU5 503 aa22.8■■□□□ 1.24
CCS-208ENST00000533244 NLRP7Q8WX94 980 aa22.8■■□□□ 1.24
CCS-208ENST00000533244 TMEM143Q96AN5 459 aa22.8■■□□□ 1.24
CCS-208ENST00000533244 ZNF668Q96K58 619 aaPredicted RBP22.8■■□□□ 1.24
CCS-208ENST00000533244 MTRQ99707 1265 aa22.8■■□□□ 1.24
CCS-208ENST00000533244 ZBED2Q9BTP6 218 aa22.8■■□□□ 1.24
CCS-208ENST00000533244 A0A087WWV3 80 aa22.79■■□□□ 1.24
CCS-208ENST00000533244 A0A087WZ62 844 aa22.79■■□□□ 1.24
CCS-208ENST00000533244 LCHNA4D1U4 455 aa22.79■■□□□ 1.24
CCS-208ENST00000533244 MGEA5O60502 916 aa22.79■■□□□ 1.24
CCS-208ENST00000533244 CCT6AP40227 531 aaKnown RBP22.79■■□□□ 1.24
CCS-208ENST00000533244 DSC3Q14574 896 aa22.79■■□□□ 1.24
CCS-208ENST00000533244 GRIN2CQ14957 1233 aa22.79■■□□□ 1.24
CCS-208ENST00000533244 PPP2R2DQ66LE6 453 aa22.79■■□□□ 1.24
CCS-208ENST00000533244 SP7Q8TDD2 431 aaPredicted RBP22.79■■□□□ 1.24
CCS-208ENST00000533244 SNX29Q8TEQ0 813 aa22.79■■□□□ 1.24
CCS-208ENST00000533244 PSPC1Q8WXF1 523 aaKnown RBP22.79■■□□□ 1.24
CCS-208ENST00000533244 FDXACB1Q9BRP7 624 aaPredicted RBP22.79■■□□□ 1.24
CCS-208ENST00000533244 MMTAG2Q9BU76 263 aaKnown RBP22.79■■□□□ 1.24
CCS-208ENST00000533244 BMP2KQ9NSY1 1161 aaPredicted RBP22.79■■□□□ 1.24
CCS-208ENST00000533244 INSL6Q9Y581 213 aa22.79■■□□□ 1.24
CCS-208ENST00000533244 COL4A3BPQ9Y5P4 624 aa22.79■■□□□ 1.24
CCS-208ENST00000533244 PP2D1A8MPX8 630 aa22.78■■□□□ 1.24
CCS-208ENST00000533244 TAP1Q03518 808 aa22.78■■□□□ 1.24
CCS-208ENST00000533244 SF3A1Q15459 793 aaKnown RBP22.78■■□□□ 1.24
CCS-208ENST00000533244 FAM117BQ6P1L5 589 aa22.78■■□□□ 1.24
CCS-208ENST00000533244 KSR1Q8IVT5 923 aa22.78■■□□□ 1.24
CCS-208ENST00000533244 PRPF31Q8WWY3 499 aaKnown RBP22.78■■□□□ 1.24
CCS-208ENST00000533244 CDX2Q99626 313 aaPredicted RBP22.78■■□□□ 1.24
CCS-208ENST00000533244 GCOM2Q9BZD3 368 aaPredicted RBP22.78■■□□□ 1.24
CCS-208ENST00000533244 RC3H2Q9HBD1 1191 aaKnown RBP22.78■■□□□ 1.24
CCS-208ENST00000533244 ATP6V0A4Q9HBG4 840 aa22.78■■□□□ 1.24
CCS-208ENST00000533244 KRT79Q5XKE5 535 aa22.77■■□□□ 1.24
CCS-208ENST00000533244 CCDC43Q96MW1 224 aaKnown RBP22.77■■□□□ 1.24
CCS-208ENST00000533244 SCLT1Q96NL6 688 aa22.77■■□□□ 1.24
CCS-208ENST00000533244 ZSCAN16Q9H4T2 348 aaPredicted RBP22.77■■□□□ 1.24
CCS-208ENST00000533244 IFT122Q9HBG6 1241 aa22.77■■□□□ 1.24
CCS-208ENST00000533244 RGS18Q9NS28 235 aa22.77■■□□□ 1.24
CCS-208ENST00000533244 VWA3AA6NCI4 1184 aa22.76■■□□□ 1.23
CCS-208ENST00000533244 ASAP2O43150 1006 aa22.76■■□□□ 1.23
CCS-208ENST00000533244 CDC25AP30304 524 aa22.76■■□□□ 1.23
CCS-208ENST00000533244 ARL2P36404 184 aa22.76■■□□□ 1.23
CCS-208ENST00000533244 LAMTOR4Q0VGL1 99 aa22.76■■□□□ 1.23
CCS-208ENST00000533244 PTPAQ15257 358 aa22.76■■□□□ 1.23
CCS-208ENST00000533244 HYIQ5T013 277 aa22.76■■□□□ 1.23
CCS-208ENST00000533244 FAM173BQ6P4H8 233 aa22.76■■□□□ 1.23
CCS-208ENST00000533244 NLRP4Q96MN2 994 aa22.76■■□□□ 1.23
CCS-208ENST00000533244 C1orf112Q9NSG2 853 aa22.76■■□□□ 1.23
CCS-208ENST00000533244 C9IYK1 514 aa22.75■■□□□ 1.23
CCS-208ENST00000533244 UPP2O95045 317 aa22.75■■□□□ 1.23
CCS-208ENST00000533244 HSP90AA1P07900 732 aaKnown RBP22.75■■□□□ 1.23
CCS-208ENST00000533244 PDIA4P13667 645 aaKnown RBP22.75■■□□□ 1.23
CCS-208ENST00000533244 NPAS4Q8IUM7 802 aa22.75■■□□□ 1.23
CCS-208ENST00000533244 ADAM2Q99965 735 aa22.75■■□□□ 1.23
CCS-208ENST00000533244 INO80BQ9C086 356 aaPredicted RBP22.75■■□□□ 1.23
CCS-208ENST00000533244 DDX19AQ9NUU7 478 aaKnown RBP22.75■■□□□ 1.23
CCS-208ENST00000533244 KIAA1024Q9UPX6 916 aa22.75■■□□□ 1.23
CCS-208ENST00000533244 STXBP5LQ9Y2K9 1186 aa22.75■■□□□ 1.23
CCS-208ENST00000533244 LINC01553A4QN01 128 aa22.74■■□□□ 1.23
CCS-208ENST00000533244 USO1O60763 962 aaKnown RBP22.74■■□□□ 1.23
CCS-208ENST00000533244 FGFR4P22455 802 aa22.74■■□□□ 1.23
CCS-208ENST00000533244 SARSP49591 514 aaKnown RBP22.74■■□□□ 1.23
CCS-208ENST00000533244 MXD4Q14582 209 aaPredicted RBP22.74■■□□□ 1.23
CCS-208ENST00000533244 ZNF689Q96CS4 500 aaPredicted RBP22.74■■□□□ 1.23
CCS-208ENST00000533244 AK8Q96MA6 479 aa22.74■■□□□ 1.23
CCS-208ENST00000533244 CLIC4Q9Y696 253 aa22.74■■□□□ 1.23
CCS-208ENST00000533244 MORC2Q9Y6X9 1032 aaPredicted RBP22.74■■□□□ 1.23
CCS-208ENST00000533244 DENND3A2RUS2 1198 aa22.74■■□□□ 1.23
CCS-208ENST00000533244 CSDE1O75534 798 aaKnown RBP22.74■■□□□ 1.23
CCS-208ENST00000533244 DGKIO75912 1065 aa22.74■■□□□ 1.23
CCS-208ENST00000533244 SFPQP23246 707 aaKnown RBP eCLIP22.74■■□□□ 1.23
CCS-208ENST00000533244 FAM189BP81408 668 aa22.74■■□□□ 1.23
CCS-208ENST00000533244 POU5F1BQ06416 359 aa22.74■■□□□ 1.23
CCS-208ENST00000533244 SLC24A5Q71RS6 500 aa22.74■■□□□ 1.23
CCS-208ENST00000533244 SPRED2Q7Z698 418 aa22.74■■□□□ 1.23
CCS-208ENST00000533244 SRGAP1Q7Z6B7 1085 aa22.74■■□□□ 1.23
CCS-208ENST00000533244 IFNLR1Q8IU57 520 aaPredicted RBP22.74■■□□□ 1.23
CCS-208ENST00000533244 KCTD17Q8N5Z5 321 aa22.74■■□□□ 1.23
CCS-208ENST00000533244 MCPH1Q8NEM0 835 aa22.74■■□□□ 1.23
CCS-208ENST00000533244 ASAP3Q8TDY4 903 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms