RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 TGS1Q96RS0 853 aaKnown RBP17.18■□□□□ 0.34
CPSF1-210ENST00000532935 DHX33Q9H6R0 707 aaKnown RBP17.18■□□□□ 0.34
CPSF1-210ENST00000532935 SUCLA2Q9P2R7 463 aaPredicted RBP17.18■□□□□ 0.34
CPSF1-210ENST00000532935 PCDHB6Q9Y5E3 794 aa17.18■□□□□ 0.34
CPSF1-210ENST00000532935 RFXAPO00287 272 aa17.17■□□□□ 0.34
CPSF1-210ENST00000532935 IGFBP4P22692 258 aa17.17■□□□□ 0.34
CPSF1-210ENST00000532935 POLGP54098 1239 aaPredicted RBP17.17■□□□□ 0.34
CPSF1-210ENST00000532935 ERVK-21P61565 698 aa17.17■□□□□ 0.34
CPSF1-210ENST00000532935 CDC42EP1Q00587 391 aa17.17■□□□□ 0.34
CPSF1-210ENST00000532935 TSHZ2Q9NRE2 1034 aa17.17■□□□□ 0.34
CPSF1-210ENST00000532935 PRRC2BQ5JSZ5 2229 aaKnown RBP17.16■□□□□ 0.34
CPSF1-210ENST00000532935 DENND3A2RUS2 1198 aa17.16■□□□□ 0.34
CPSF1-210ENST00000532935 SPATA31C1P0DKV0 1188 aa17.16■□□□□ 0.34
CPSF1-210ENST00000532935 DARSP14868 501 aaKnown RBP17.16■□□□□ 0.34
CPSF1-210ENST00000532935 FXR2P51116 673 aaKnown RBP eCLIP17.16■□□□□ 0.341e-6■■□□□ 13.5
CPSF1-210ENST00000532935 PTGDRQ13258 359 aa17.16■□□□□ 0.34
CPSF1-210ENST00000532935 RILPL1Q5EBL4 403 aa17.16■□□□□ 0.34
CPSF1-210ENST00000532935 RHPN2Q8IUC4 686 aa17.16■□□□□ 0.34
CPSF1-210ENST00000532935 NPAS4Q8IUM7 802 aa17.16■□□□□ 0.34
CPSF1-210ENST00000532935 CRIPAKQ8N1N5 446 aa17.16■□□□□ 0.34
CPSF1-210ENST00000532935 ADAM2Q99965 735 aa17.16■□□□□ 0.34
CPSF1-210ENST00000532935 POLR3CQ9BUI4 534 aaPredicted RBP17.16■□□□□ 0.34
CPSF1-210ENST00000532935 GCOM2Q9BZD3 368 aaPredicted RBP17.16■□□□□ 0.34
CPSF1-210ENST00000532935 RC3H2Q9HBD1 1191 aaKnown RBP17.16■□□□□ 0.34
CPSF1-210ENST00000532935 TUFT1Q9NNX1 390 aa17.16■□□□□ 0.34
CPSF1-210ENST00000532935 RGS18Q9NS28 235 aa17.16■□□□□ 0.34
CPSF1-210ENST00000532935 BMP2KQ9NSY1 1161 aaPredicted RBP17.16■□□□□ 0.34
CPSF1-210ENST00000532935 ANKEF1Q9NU02 776 aa17.16■□□□□ 0.34
CPSF1-210ENST00000532935 MTUS1Q9ULD2 1270 aa17.16■□□□□ 0.34
CPSF1-210ENST00000532935 A0A087WZ62 844 aa17.15■□□□□ 0.34
CPSF1-210ENST00000532935 GAS2O43903 313 aaKnown RBP17.15■□□□□ 0.34
CPSF1-210ENST00000532935 MED24O75448 989 aa17.15■□□□□ 0.34
CPSF1-210ENST00000532935 DGKIO75912 1065 aa17.15■□□□□ 0.34
CPSF1-210ENST00000532935 STAG3L1P0CL83 205 aa17.15■□□□□ 0.34
CPSF1-210ENST00000532935 DSC3Q14574 896 aa17.15■□□□□ 0.34
CPSF1-210ENST00000532935 EMC2Q15006 297 aa17.15■□□□□ 0.34
CPSF1-210ENST00000532935 ZNF410Q86VK4 478 aa17.15■□□□□ 0.34
CPSF1-210ENST00000532935 CATSPER3Q86XQ3 398 aa17.15■□□□□ 0.34
CPSF1-210ENST00000532935 KSR1Q8IVT5 923 aa17.15■□□□□ 0.34
CPSF1-210ENST00000532935 ERMNQ8TAM6 284 aa17.15■□□□□ 0.34
CPSF1-210ENST00000532935 TMEM143Q96AN5 459 aa17.15■□□□□ 0.34
CPSF1-210ENST00000532935 ZNF689Q96CS4 500 aaPredicted RBP17.15■□□□□ 0.34
CPSF1-210ENST00000532935 FDXACB1Q9BRP7 624 aaPredicted RBP17.15■□□□□ 0.34
CPSF1-210ENST00000532935 C17orf80Q9BSJ5 609 aa17.15■□□□□ 0.34
CPSF1-210ENST00000532935 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.15■□□□□ 0.34
CPSF1-210ENST00000532935 C1orf112Q9NSG2 853 aa17.15■□□□□ 0.34
CPSF1-210ENST00000532935 COL4A3BPQ9Y5P4 624 aa17.15■□□□□ 0.34
CPSF1-210ENST00000532935 A0A0C4DFX4 3053 aa17.15■□□□□ 0.34
CPSF1-210ENST00000532935 ADGRA3Q8IWK6 1321 aa17.15■□□□□ 0.34
CPSF1-210ENST00000532935 A0A087WWV3 80 aa17.14■□□□□ 0.33
CPSF1-210ENST00000532935 LAD1O00515 517 aa17.14■□□□□ 0.33
CPSF1-210ENST00000532935 CSDE1O75534 798 aaKnown RBP17.14■□□□□ 0.33
CPSF1-210ENST00000532935 XRCC6P12956 609 aaKnown RBP eCLIP17.14■□□□□ 0.33
CPSF1-210ENST00000532935 IBSPP21815 317 aaPredicted RBP17.14■□□□□ 0.33
CPSF1-210ENST00000532935 FGFR4P22455 802 aa17.14■□□□□ 0.33
CPSF1-210ENST00000532935 RPA1P27694 616 aa17.14■□□□□ 0.33
CPSF1-210ENST00000532935 SARSP49591 514 aaKnown RBP17.14■□□□□ 0.33
CPSF1-210ENST00000532935 RARRES1P49788 294 aa17.14■□□□□ 0.33
CPSF1-210ENST00000532935 SLC24A5Q71RS6 500 aa17.14■□□□□ 0.33
CPSF1-210ENST00000532935 PIGOQ8TEQ8 1089 aa17.14■□□□□ 0.33
CPSF1-210ENST00000532935 TCP11Q8WWU5 503 aa17.14■□□□□ 0.33
CPSF1-210ENST00000532935 PRPF31Q8WWY3 499 aaKnown RBP17.14■□□□□ 0.33
CPSF1-210ENST00000532935 PSPC1Q8WXF1 523 aaKnown RBP17.14■□□□□ 0.33
CPSF1-210ENST00000532935 NLRP4Q96MN2 994 aa17.14■□□□□ 0.33
CPSF1-210ENST00000532935 CCDC43Q96MW1 224 aaKnown RBP17.14■□□□□ 0.33
CPSF1-210ENST00000532935 MTRQ99707 1265 aa17.14■□□□□ 0.33
CPSF1-210ENST00000532935 LRFN2Q9ULH4 789 aa17.14■□□□□ 0.33
CPSF1-210ENST00000532935 SPTBN5Q9NRC6 3674 aaKnown RBP17.14■□□□□ 0.33
CPSF1-210ENST00000532935 C9IYK1 514 aa17.13■□□□□ 0.33
CPSF1-210ENST00000532935 K7ELQ4 463 aaPredicted RBP17.13■□□□□ 0.33
CPSF1-210ENST00000532935 DGAT1O75907 488 aa17.13■□□□□ 0.33
CPSF1-210ENST00000532935 PRPHP41219 470 aa17.13■□□□□ 0.33
CPSF1-210ENST00000532935 GRB10Q13322 594 aa17.13■□□□□ 0.33
CPSF1-210ENST00000532935 HAUS3Q68CZ6 603 aa17.13■□□□□ 0.33
CPSF1-210ENST00000532935 FIBCD1Q8N539 461 aa17.13■□□□□ 0.33
CPSF1-210ENST00000532935 FBXO22Q8NEZ5 403 aa17.13■□□□□ 0.33
CPSF1-210ENST00000532935 GDPD5Q8WTR4 605 aa17.13■□□□□ 0.33
CPSF1-210ENST00000532935 INTS4Q96HW7 963 aaKnown RBP17.13■□□□□ 0.33
CPSF1-210ENST00000532935 SAMD11Q96NU1 681 aa17.13■□□□□ 0.33
CPSF1-210ENST00000532935 NACC1Q96RE7 527 aa17.13■□□□□ 0.33
CPSF1-210ENST00000532935 INO80BQ9C086 356 aaPredicted RBP17.13■□□□□ 0.33
CPSF1-210ENST00000532935 XPNPEP1Q9NQW7 623 aa17.13■□□□□ 0.33
CPSF1-210ENST00000532935 RNF216Q9NWF9 866 aaPredicted RBP17.13■□□□□ 0.33
CPSF1-210ENST00000532935 LRWD1Q9UFC0 647 aa17.13■□□□□ 0.33
CPSF1-210ENST00000532935 PCDHB7Q9Y5E2 793 aa17.13■□□□□ 0.33
CPSF1-210ENST00000532935 ATG2AQ2TAZ0 1938 aa17.13■□□□□ 0.33
CPSF1-210ENST00000532935 GTPBP6O43824 516 aaPredicted RBP17.12■□□□□ 0.33
CPSF1-210ENST00000532935 LPXNO60711 386 aa17.12■□□□□ 0.33
CPSF1-210ENST00000532935 ZSCAN20P17040 1043 aaPredicted RBP17.12■□□□□ 0.33
CPSF1-210ENST00000532935 POU3F3P20264 500 aaPredicted RBP17.12■□□□□ 0.33
CPSF1-210ENST00000532935 PDCP20941 246 aa17.12■□□□□ 0.33
CPSF1-210ENST00000532935 SFPQP23246 707 aaKnown RBP eCLIP17.12■□□□□ 0.33
CPSF1-210ENST00000532935 FAM189BP81408 668 aa17.12■□□□□ 0.33
CPSF1-210ENST00000532935 LAMTOR4Q0VGL1 99 aa17.12■□□□□ 0.33
CPSF1-210ENST00000532935 BTG3Q14201 252 aaPredicted RBP17.12■□□□□ 0.33
CPSF1-210ENST00000532935 PDIA5Q14554 519 aa17.12■□□□□ 0.33
CPSF1-210ENST00000532935 EPC2Q52LR7 807 aa17.12■□□□□ 0.33
CPSF1-210ENST00000532935 POTEGQ6S5H5 508 aa17.12■□□□□ 0.33
CPSF1-210ENST00000532935 IGSF22Q8N9C0 903 aa17.12■□□□□ 0.33
CPSF1-210ENST00000532935 SLC17A8Q8NDX2 589 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms