RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 GINS2Q9Y248 185 aa27.63■■■□□ 2.01
USP48-214ENST00000532737 GHRP10912 638 aa27.62■■■□□ 2.01
USP48-214ENST00000532737 NCLP19338 710 aaKnown RBP27.62■■■□□ 2.01
USP48-214ENST00000532737 NLRP11P59045 1033 aaKnown RBP27.62■■■□□ 2.01
USP48-214ENST00000532737 KRT85P78386 507 aa27.62■■■□□ 2.01
USP48-214ENST00000532737 KARSQ15046 597 aaKnown RBP27.62■■■□□ 2.01
USP48-214ENST00000532737 PSRC1Q6PGN9 363 aaPredicted RBP27.62■■■□□ 2.01
USP48-214ENST00000532737 PADI6Q6TGC4 694 aa27.62■■■□□ 2.01
USP48-214ENST00000532737 LRRC15Q8TF66 581 aa27.62■■■□□ 2.01
USP48-214ENST00000532737 CALML4Q96GE6 196 aa27.62■■■□□ 2.01
USP48-214ENST00000532737 MTRQ99707 1265 aa27.62■■■□□ 2.01
USP48-214ENST00000532737 NT5C3AQ9H0P0 336 aa27.62■■■□□ 2.01
USP48-214ENST00000532737 ATP6V0A4Q9HBG4 840 aa27.62■■■□□ 2.01
USP48-214ENST00000532737 CIZ1Q9ULV3 898 aaPredicted RBP27.62■■■□□ 2.01
USP48-214ENST00000532737 GPC3P51654 580 aa27.61■■■□□ 2.01
USP48-214ENST00000532737 PLEKHG4Q58EX7 1191 aa27.61■■■□□ 2.01
USP48-214ENST00000532737 AXDND1Q5T1B0 1012 aaPredicted RBP27.61■■■□□ 2.01
USP48-214ENST00000532737 OTOP2Q7RTS6 562 aa27.61■■■□□ 2.01
USP48-214ENST00000532737 KCTD17Q8N5Z5 321 aa27.61■■■□□ 2.01
USP48-214ENST00000532737 DBF4BQ8NFT6 615 aa27.61■■■□□ 2.01
USP48-214ENST00000532737 STXBP5LQ9Y2K9 1186 aa27.61■■■□□ 2.01
USP48-214ENST00000532737 TET1Q8NFU7 2136 aa27.61■■■□□ 2.01
USP48-214ENST00000532737 GAS2O43903 313 aaKnown RBP27.6■■■□□ 2.01
USP48-214ENST00000532737 CUTAO60888 179 aa27.6■■■□□ 2.01
USP48-214ENST00000532737 CYP11B2P19099 503 aa27.6■■■□□ 2.01
USP48-214ENST00000532737 PLCG1P19174 1290 aa27.6■■■□□ 2.01
USP48-214ENST00000532737 CRYBB1P53674 252 aaPredicted RBP27.6■■■□□ 2.01
USP48-214ENST00000532737 RHPN2Q8IUC4 686 aa27.6■■■□□ 2.01
USP48-214ENST00000532737 KSR1Q8IVT5 923 aa27.6■■■□□ 2.01
USP48-214ENST00000532737 LEO1Q8WVC0 666 aaPredicted RBP27.6■■■□□ 2.01
USP48-214ENST00000532737 TMEM40Q8WWA1 233 aa27.6■■■□□ 2.01
USP48-214ENST00000532737 PRPF31Q8WWY3 499 aaKnown RBP27.6■■■□□ 2.01
USP48-214ENST00000532737 OSMRQ99650 979 aa27.6■■■□□ 2.01
USP48-214ENST00000532737 AGO3Q9H9G7 860 aaKnown RBP27.6■■■□□ 2.01
USP48-214ENST00000532737 PCDHA7Q9UN72 937 aa27.6■■■□□ 2.01
USP48-214ENST00000532737 CUL9Q8IWT3 2517 aa27.59■■■□□ 2.01
USP48-214ENST00000532737 ME1P48163 572 aa27.59■■■□□ 2.01
USP48-214ENST00000532737 CNKSR3Q6P9H4 555 aa27.59■■■□□ 2.01
USP48-214ENST00000532737 MAEAQ7L5Y9 396 aa27.59■■■□□ 2.01
USP48-214ENST00000532737 ZNF710Q8N1W2 664 aa27.59■■■□□ 2.01
USP48-214ENST00000532737 RASSF8Q8NHQ8 419 aa27.59■■■□□ 2.01
USP48-214ENST00000532737 TCP11Q8WWU5 503 aa27.59■■■□□ 2.01
USP48-214ENST00000532737 PSPC1Q8WXF1 523 aaKnown RBP27.59■■■□□ 2.01
USP48-214ENST00000532737 HERVK_113Q902F9 699 aa27.59■■■□□ 2.01
USP48-214ENST00000532737 SQORQ9Y6N5 450 aa27.59■■■□□ 2.01
USP48-214ENST00000532737 ARID2Q68CP9 1835 aa27.58■■■□□ 2.01
USP48-214ENST00000532737 ARL2P36404 184 aa27.58■■■□□ 2.01
USP48-214ENST00000532737 SHC4Q6S5L8 630 aa27.58■■■□□ 2.01
USP48-214ENST00000532737 TSHZ1Q6ZSZ6 1077 aa27.58■■■□□ 2.01
USP48-214ENST00000532737 SEPT8Q92599 483 aa27.58■■■□□ 2.01
USP48-214ENST00000532737 SPATA32Q96LK8 384 aa27.58■■■□□ 2.01
USP48-214ENST00000532737 GPRC5CQ9NQ84 441 aa27.58■■■□□ 2.01
USP48-214ENST00000532737 BLOC1S4Q9NUP1 217 aa27.58■■■□□ 2.01
USP48-214ENST00000532737 CXXC1Q9P0U4 656 aaPredicted RBP27.58■■■□□ 2.01
USP48-214ENST00000532737 NOC2LQ9Y3T9 749 aaKnown RBP27.58■■■□□ 2.01
USP48-214ENST00000532737 COL4A3BPQ9Y5P4 624 aa27.58■■■□□ 2.01
USP48-214ENST00000532737 PLA2G4BP0C869 781 aa27.57■■■□□ 2
USP48-214ENST00000532737 CD52P31358 61 aa27.57■■■□□ 2
USP48-214ENST00000532737 CDC42EP1Q00587 391 aa27.57■■■□□ 2
USP48-214ENST00000532737 LAMTOR4Q0VGL1 99 aa27.57■■■□□ 2
USP48-214ENST00000532737 RASIP1Q5U651 963 aa27.57■■■□□ 2
USP48-214ENST00000532737 USP38Q8NB14 1042 aa27.57■■■□□ 2
USP48-214ENST00000532737 MCPH1Q8NEM0 835 aa27.57■■■□□ 2
USP48-214ENST00000532737 NLRP7Q8WX94 980 aa27.57■■■□□ 2
USP48-214ENST00000532737 RNPC3Q96LT9 517 aaKnown RBP27.57■■■□□ 2
USP48-214ENST00000532737 IFIH1Q9BYX4 1025 aaKnown RBP27.57■■■□□ 2
USP48-214ENST00000532737 A0A087WZ62 844 aa27.56■■■□□ 2
USP48-214ENST00000532737 SSBP05455 408 aaKnown RBP eCLIP27.56■■■□□ 2
USP48-214ENST00000532737 ACTN1P12814 892 aa27.56■■■□□ 2
USP48-214ENST00000532737 TXLNAP40222 546 aa27.56■■■□□ 2
USP48-214ENST00000532737 SYT2Q8N9I0 419 aaPredicted RBP27.56■■■□□ 2
USP48-214ENST00000532737 ASAP3Q8TDY4 903 aa27.56■■■□□ 2
USP48-214ENST00000532737 NLRP4Q96MN2 994 aa27.56■■■□□ 2
USP48-214ENST00000532737 SCLT1Q96NL6 688 aa27.56■■■□□ 2
USP48-214ENST00000532737 FDXACB1Q9BRP7 624 aaPredicted RBP27.56■■■□□ 2
USP48-214ENST00000532737 RUSC1Q9BVN2 902 aa27.56■■■□□ 2
USP48-214ENST00000532737 PANK2Q9BZ23 570 aa27.56■■■□□ 2
USP48-214ENST00000532737 POLR3FQ9H1D9 316 aaPredicted RBP27.56■■■□□ 2
USP48-214ENST00000532737 POLD4Q9HCU8 107 aa27.56■■■□□ 2
USP48-214ENST00000532737 CCDC39Q9UFE4 941 aa27.56■■■□□ 2
USP48-214ENST00000532737 SIP14410 1827 aa27.55■■■□□ 2
USP48-214ENST00000532737 A0A087X0B3 334 aa27.55■■■□□ 2
USP48-214ENST00000532737 DLL1O00548 723 aa27.55■■■□□ 2
USP48-214ENST00000532737 DARSP14868 501 aaKnown RBP27.55■■■□□ 2
USP48-214ENST00000532737 SLC12A3P55017 1021 aa27.55■■■□□ 2
USP48-214ENST00000532737 FAM102BQ5T8I3 360 aa27.55■■■□□ 2
USP48-214ENST00000532737 FAM109BQ6ICB4 259 aaPredicted RBP27.55■■■□□ 2
USP48-214ENST00000532737 RINT1Q6NUQ1 792 aa27.55■■■□□ 2
USP48-214ENST00000532737 C1orf186Q6ZWK4 172 aa27.55■■■□□ 2
USP48-214ENST00000532737 ZNF410Q86VK4 478 aa27.55■■■□□ 2
USP48-214ENST00000532737 CHMP5Q9NZZ3 219 aa27.55■■■□□ 2
USP48-214ENST00000532737 PADI3Q9ULW8 664 aa27.55■■■□□ 2
USP48-214ENST00000532737 ASAP2O43150 1006 aa27.54■■■□□ 2
USP48-214ENST00000532737 RPS6KA5O75582 802 aa27.54■■■□□ 2
USP48-214ENST00000532737 SRGAP2CP0DJJ0 459 aa27.54■■■□□ 2
USP48-214ENST00000532737 GLRA2P23416 452 aa27.54■■■□□ 2
USP48-214ENST00000532737 EIF4BP23588 611 aaKnown RBP27.54■■■□□ 2
USP48-214ENST00000532737 IKBKEQ14164 716 aa27.54■■■□□ 2
USP48-214ENST00000532737 MXD4Q14582 209 aaPredicted RBP27.54■■■□□ 2
USP48-214ENST00000532737 RRAGBQ5VZM2 374 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms