RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 KCNA5P22460 613 aa21.29■■□□□ 1
SSH3-209ENST00000532600 EIF4BP23588 611 aaKnown RBP21.29■■□□□ 1
SSH3-209ENST00000532600 TMOD1P28289 359 aa21.29■■□□□ 1
SSH3-209ENST00000532600 SPIRE1Q08AE8 756 aa21.29■■□□□ 1
SSH3-209ENST00000532600 TBC1D8BQ0IIM8 1120 aa21.29■■□□□ 1
SSH3-209ENST00000532600 LEXMQ3ZCV2 418 aa21.29■■□□□ 1
SSH3-209ENST00000532600 PLA2G4FQ68DD2 849 aa21.29■■□□□ 1
SSH3-209ENST00000532600 ZNF579Q8NAF0 562 aaKnown RBP21.29■■□□□ 1
SSH3-209ENST00000532600 FAM20AQ96MK3 541 aa21.29■■□□□ 1
SSH3-209ENST00000532600 PLVAPQ9BX97 442 aa21.29■■□□□ 1
SSH3-209ENST00000532600 NSUN3Q9H649 340 aaKnown RBP21.29■■□□□ 1
SSH3-209ENST00000532600 C1orf112Q9NSG2 853 aa21.29■■□□□ 1
SSH3-209ENST00000532600 LRFN2Q9ULH4 789 aa21.29■■□□□ 1
SSH3-209ENST00000532600 PCDHB7Q9Y5E2 793 aa21.29■■□□□ 1
SSH3-209ENST00000532600 CSDE1O75534 798 aaKnown RBP21.28■■□□□ 1
SSH3-209ENST00000532600 MMP1P03956 469 aa21.28■■□□□ 1
SSH3-209ENST00000532600 DARSP14868 501 aaKnown RBP21.28■■□□□ 1
SSH3-209ENST00000532600 GCFC2P16383 781 aaKnown RBP21.28■■□□□ 1
SSH3-209ENST00000532600 KRT2P35908 639 aa21.28■■□□□ 1
SSH3-209ENST00000532600 PSMC5P62195 406 aa21.28■■□□□ 1
SSH3-209ENST00000532600 FAM43BQ6ZT52 329 aaPredicted RBP21.28■■□□□ 1
SSH3-209ENST00000532600 SPPL3Q8TCT6 385 aa21.28■■□□□ 1
SSH3-209ENST00000532600 NEK9Q8TD19 979 aa21.28■■□□□ 1
SSH3-209ENST00000532600 WASF1Q92558 559 aa21.28■■□□□ 1
SSH3-209ENST00000532600 P2RX5Q93086 422 aa21.28■■□□□ 1
SSH3-209ENST00000532600 LMAN2LQ9H0V9 348 aa21.28■■□□□ 1
SSH3-209ENST00000532600 DDX11L8A8MPP1 907 aa21.27■■□□□ 1
SSH3-209ENST00000532600 BTBD18B2RXH4 712 aa21.27■■□□□ 1
SSH3-209ENST00000532600 CSPG5O95196 566 aa21.27■■□□□ 1
SSH3-209ENST00000532600 FGFR1P11362 822 aa21.27■■□□□ 1
SSH3-209ENST00000532600 GTF2F1P35269 517 aaKnown RBP eCLIP21.27■■□□□ 1
SSH3-209ENST00000532600 LTBRP36941 435 aa21.27■■□□□ 1
SSH3-209ENST00000532600 FOSBP53539 338 aa21.27■■□□□ 1
SSH3-209ENST00000532600 ODR4Q5SWX8 454 aa21.27■■□□□ 1
SSH3-209ENST00000532600 KLHL23Q8NBE8 558 aa21.27■■□□□ 1
SSH3-209ENST00000532600 CD320Q9NPF0 282 aa21.27■■□□□ 1
SSH3-209ENST00000532600 TBKBP1A7MCY6 615 aa21.26■□□□□ 0.99
SSH3-209ENST00000532600 H3BQ06 376 aaPredicted RBP21.26■□□□□ 0.99
SSH3-209ENST00000532600 TBX3O15119 743 aa21.26■□□□□ 0.99
SSH3-209ENST00000532600 MAFO75444 373 aaPredicted RBP21.26■□□□□ 0.99
SSH3-209ENST00000532600 IRS1P35568 1242 aa21.26■□□□□ 0.99
SSH3-209ENST00000532600 NPEPPSP55786 919 aa21.26■□□□□ 0.99
SSH3-209ENST00000532600 HYAL1Q12794 435 aa21.26■□□□□ 0.99
SSH3-209ENST00000532600 PABPC5Q96DU9 382 aaKnown RBP21.26■□□□□ 0.99
SSH3-209ENST00000532600 CWH43Q9H720 699 aa21.26■□□□□ 0.99
SSH3-209ENST00000532600 ELAC1Q9H777 363 aaKnown RBP21.26■□□□□ 0.99
SSH3-209ENST00000532600 TMEM161AQ9NX61 479 aa21.26■□□□□ 0.99
SSH3-209ENST00000532600 QARSP47897 775 aaKnown RBP21.25■□□□□ 0.99
SSH3-209ENST00000532600 CTC1Q2NKJ3 1217 aa21.25■□□□□ 0.99
SSH3-209ENST00000532600 LRRC55Q6ZSA7 311 aa21.25■□□□□ 0.99
SSH3-209ENST00000532600 KSR1Q8IVT5 923 aa21.25■□□□□ 0.99
SSH3-209ENST00000532600 ZNF710Q8N1W2 664 aa21.25■□□□□ 0.99
SSH3-209ENST00000532600 NLRP7Q8WX94 980 aa21.25■□□□□ 0.99
SSH3-209ENST00000532600 KHSRPQ92945 711 aaKnown RBP eCLIP21.25■□□□□ 0.99
SSH3-209ENST00000532600 CYP26B1Q9NR63 512 aa21.25■□□□□ 0.99
SSH3-209ENST00000532600 RGL1Q9NZL6 768 aa21.25■□□□□ 0.99
SSH3-209ENST00000532600 PCDHGC5Q9Y5F6 944 aa21.25■□□□□ 0.99
SSH3-209ENST00000532600 A0A087WZ62 844 aa21.24■□□□□ 0.99
SSH3-209ENST00000532600 ZBTB39O15060 712 aa21.24■□□□□ 0.99
SSH3-209ENST00000532600 P4HBP07237 508 aaKnown RBP21.24■□□□□ 0.99
SSH3-209ENST00000532600 IL9P15248 144 aa21.24■□□□□ 0.99
SSH3-209ENST00000532600 ATF7P17544 494 aaPredicted RBP21.24■□□□□ 0.99
SSH3-209ENST00000532600 DLX2Q07687 328 aaPredicted RBP21.24■□□□□ 0.99
SSH3-209ENST00000532600 EPHA7Q15375 998 aa21.24■□□□□ 0.99
SSH3-209ENST00000532600 NAALADL2Q58DX5 795 aa21.24■□□□□ 0.99
SSH3-209ENST00000532600 ECHDC2Q86YB7 292 aa21.24■□□□□ 0.99
SSH3-209ENST00000532600 DIS3L2Q8IYB7 885 aaKnown RBP21.24■□□□□ 0.99
SSH3-209ENST00000532600 CASD1Q96PB1 797 aa21.24■□□□□ 0.99
SSH3-209ENST00000532600 FDXACB1Q9BRP7 624 aaPredicted RBP21.24■□□□□ 0.99
SSH3-209ENST00000532600 ATP6V0A4Q9HBG4 840 aa21.24■□□□□ 0.99
SSH3-209ENST00000532600 TYW1Q9NV66 732 aaKnown RBP21.24■□□□□ 0.99
SSH3-209ENST00000532600 LIMCH1Q9UPQ0 1083 aa21.24■□□□□ 0.99
SSH3-209ENST00000532600 ARID2Q68CP9 1835 aa21.24■□□□□ 0.99
SSH3-209ENST00000532600 LINC01565O15544 149 aa21.23■□□□□ 0.99
SSH3-209ENST00000532600 ADGRD2Q7Z7M1 963 aa21.23■□□□□ 0.99
SSH3-209ENST00000532600 ZNF598Q86UK7 904 aaKnown RBP21.23■□□□□ 0.99
SSH3-209ENST00000532600 POF1BQ8WVV4 589 aa21.23■□□□□ 0.99
SSH3-209ENST00000532600 DYDC2Q96IM9 177 aa21.23■□□□□ 0.99
SSH3-209ENST00000532600 NAP1L4Q99733 375 aaKnown RBP21.23■□□□□ 0.99
SSH3-209ENST00000532600 LXNQ9BS40 222 aa21.23■□□□□ 0.99
SSH3-209ENST00000532600 SUCLA2Q9P2R7 463 aaPredicted RBP21.23■□□□□ 0.99
SSH3-209ENST00000532600 GRXCR2A6NFK2 248 aa21.22■□□□□ 0.99
SSH3-209ENST00000532600 CLLU1OSQ5K130 101 aa21.22■□□□□ 0.99
SSH3-209ENST00000532600 NCAPH2Q6IBW4 605 aa21.22■□□□□ 0.99
SSH3-209ENST00000532600 PTCRAQ6ISU1 281 aaPredicted RBP21.22■□□□□ 0.99
SSH3-209ENST00000532600 RHPN2Q8IUC4 686 aa21.22■□□□□ 0.99
SSH3-209ENST00000532600 C4orf19Q8IY42 314 aa21.22■□□□□ 0.99
SSH3-209ENST00000532600 COLGALT1Q8NBJ5 622 aa21.22■□□□□ 0.99
SSH3-209ENST00000532600 SCLT1Q96NL6 688 aa21.22■□□□□ 0.99
SSH3-209ENST00000532600 DHX33Q9H6R0 707 aaKnown RBP21.22■□□□□ 0.99
SSH3-209ENST00000532600 CLDND1Q9NY35 253 aa21.22■□□□□ 0.99
SSH3-209ENST00000532600 SLITRK3O94933 977 aa21.21■□□□□ 0.99
SSH3-209ENST00000532600 CTTNQ14247 550 aaKnown RBP21.21■□□□□ 0.99
SSH3-209ENST00000532600 CCDC83Q8IWF9 413 aa21.21■□□□□ 0.99
SSH3-209ENST00000532600 FAM178BQ8IXR5 827 aa21.21■□□□□ 0.99
SSH3-209ENST00000532600 CEP170P1Q96L14 293 aa21.21■□□□□ 0.99
SSH3-209ENST00000532600 MTMR9Q96QG7 549 aa21.21■□□□□ 0.99
SSH3-209ENST00000532600 GCOM2Q9BZD3 368 aaPredicted RBP21.21■□□□□ 0.99
SSH3-209ENST00000532600 TMEM117Q9H0C3 514 aa21.21■□□□□ 0.99
SSH3-209ENST00000532600 IFT122Q9HBG6 1241 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms