RNA–Protein interactions for RNA: ENST00000532056.5

KNL1-208, Transcript of kinetochore scaffold 1, human

TSL 3

Gene KNL1, Length 259 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNL1-208	ENST00000532056	LPIN1	Q14693	890 aa		11.18	□□□□□ -0.62
KNL1-208	ENST00000532056	KIZ	Q2M2Z5	673 aa		11.18	□□□□□ -0.62
KNL1-208	ENST00000532056	PLEKHG4	Q58EX7	1191 aa		11.18	□□□□□ -0.62
KNL1-208	ENST00000532056	TMEM240	Q5SV17	173 aa		11.18	□□□□□ -0.62
KNL1-208	ENST00000532056	C9orf50	Q5SZB4	431 aa		11.18	□□□□□ -0.62
KNL1-208	ENST00000532056	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.18	□□□□□ -0.62
KNL1-208	ENST00000532056	CNKSR3	Q6P9H4	555 aa		11.18	□□□□□ -0.62
KNL1-208	ENST00000532056	TSHZ1	Q6ZSZ6	1077 aa		11.18	□□□□□ -0.62
KNL1-208	ENST00000532056	ZNF365	Q70YC5	407 aa		11.18	□□□□□ -0.62
KNL1-208	ENST00000532056	ZNF410	Q86VK4	478 aa		11.18	□□□□□ -0.62
KNL1-208	ENST00000532056	RHPN2	Q8IUC4	686 aa		11.18	□□□□□ -0.62
KNL1-208	ENST00000532056	TDH	Q8IZJ6	230 aa		11.18	□□□□□ -0.62
KNL1-208	ENST00000532056	USP38	Q8NB14	1042 aa		11.18	□□□□□ -0.62
KNL1-208	ENST00000532056	PSPC1	Q8WXF1	523 aa	Known RBP	11.18	□□□□□ -0.62
KNL1-208	ENST00000532056	TMEM143	Q96AN5	459 aa		11.18	□□□□□ -0.62
KNL1-208	ENST00000532056	PLIN2	Q99541	437 aa		11.18	□□□□□ -0.62
KNL1-208	ENST00000532056	OSBPL7	Q9BZF2	842 aa		11.18	□□□□□ -0.62
KNL1-208	ENST00000532056	ADAMTS10	Q9H324	1103 aa		11.18	□□□□□ -0.62
KNL1-208	ENST00000532056	CHMP5	Q9NZZ3	219 aa		11.18	□□□□□ -0.62
KNL1-208	ENST00000532056	PCDHA7	Q9UN72	937 aa		11.18	□□□□□ -0.62
KNL1-208	ENST00000532056	COLQ	Q9Y215	455 aa	Predicted RBP	11.18	□□□□□ -0.62
KNL1-208	ENST00000532056	COL4A3BP	Q9Y5P4	624 aa		11.18	□□□□□ -0.62
KNL1-208	ENST00000532056	ASAP2	O43150	1006 aa		11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	BAIAP3	O94812	1187 aa		11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	PLA2G4B	P0C869	781 aa		11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	ARL2	P36404	184 aa		11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	SLC12A3	P55017	1021 aa		11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	MXD4	Q14582	209 aa	Predicted RBP	11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	SHH	Q15465	462 aa		11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	RASIP1	Q5U651	963 aa		11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	SHC4	Q6S5L8	630 aa		11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	SYT2	Q8N9I0	419 aa	Predicted RBP	11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	DBF4B	Q8NFT6	615 aa		11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	LRRC15	Q8TF66	581 aa		11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	PRPF31	Q8WWY3	499 aa	Known RBP	11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	NLRP7	Q8WX94	980 aa		11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	HERVK_113	Q902F9	699 aa		11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	SEPT8	Q92599	483 aa		11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	RAD54L	Q92698	747 aa		11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	APBB2	Q92870	758 aa		11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	SCLT1	Q96NL6	688 aa		11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	IPO9	Q96P70	1041 aa	Known RBP	11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	PPP1R16B	Q96T49	567 aa		11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	OSMR	Q99650	979 aa		11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	IFIH1	Q9BYX4	1025 aa	Known RBP	11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	CDHR5	Q9HBB8	845 aa		11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	BLOC1S4	Q9NUP1	217 aa		11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	KCND2	Q9NZV8	630 aa		11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	STK17A	Q9UEE5	414 aa		11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	GINS2	Q9Y248	185 aa		11.17	□□□□□ -0.62
KNL1-208	ENST00000532056	EFCAB14	O75071	495 aa		11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	RPS6KA5	O75582	802 aa		11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	SSB	P05455	408 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	DARS	P14868	501 aa	Known RBP	11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	EIF4B	P23588	611 aa	Known RBP	11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	GUCY2C	P25092	1073 aa		11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	CD52	P31358	61 aa		11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	LAMTOR4	Q0VGL1	99 aa		11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	PAK2	Q13177	524 aa		11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	TFDP1	Q14186	410 aa		11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	TCTN1	Q2MV58	587 aa		11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	ODR4	Q5SWX8	454 aa		11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	FAM102B	Q5T8I3	360 aa		11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	RRAGB	Q5VZM2	374 aa		11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	RESP18	Q5W5W9	173 aa		11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	RINT1	Q6NUQ1	792 aa		11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	CCDC73	Q6ZRK6	1079 aa		11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	FAM43B	Q6ZT52	329 aa	Predicted RBP	11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	C1orf186	Q6ZWK4	172 aa		11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	OTOP2	Q7RTS6	562 aa		11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	KSR1	Q8IVT5	923 aa		11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	ASAP3	Q8TDY4	903 aa		11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	TMEM40	Q8WWA1	233 aa		11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	LARP4B	Q92615	738 aa	Known RBP	11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	ZNF668	Q96K58	619 aa	Predicted RBP	11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	RNPC3	Q96LT9	517 aa	Known RBP	11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	NLRP4	Q96MN2	994 aa		11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	RUSC1	Q9BVN2	902 aa		11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	TIPIN	Q9BVW5	301 aa		11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	GCOM2	Q9BZD3	368 aa	Predicted RBP	11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	MTIF3	Q9H2K0	278 aa	Known RBP	11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	AGO3	Q9H9G7	860 aa	Known RBP	11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	GPRC5C	Q9NQ84	441 aa		11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	PADI3	Q9ULW8	664 aa		11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	NOC2L	Q9Y3T9	749 aa	Known RBP	11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	RANBP2	P49792	3224 aa	Known RBP	11.16	□□□□□ -0.62
KNL1-208	ENST00000532056	TET1	Q8NFU7	2136 aa		11.15	□□□□□ -0.62
KNL1-208	ENST00000532056		A0A087WZ62	844 aa		11.15	□□□□□ -0.62
KNL1-208	ENST00000532056		A0A087X0B3	334 aa		11.15	□□□□□ -0.62
KNL1-208	ENST00000532056	ABHD14A-ACY1	A0A1B0GW23	586 aa		11.15	□□□□□ -0.62
KNL1-208	ENST00000532056	GLRA2	P23416	452 aa		11.15	□□□□□ -0.62
KNL1-208	ENST00000532056	STAT6	P42226	847 aa		11.15	□□□□□ -0.62
KNL1-208	ENST00000532056	POU5F1B	Q06416	359 aa		11.15	□□□□□ -0.62
KNL1-208	ENST00000532056	CAPS	Q13938	189 aa		11.15	□□□□□ -0.62
KNL1-208	ENST00000532056	IKBKE	Q14164	716 aa		11.15	□□□□□ -0.62
KNL1-208	ENST00000532056	NAALADL2	Q58DX5	795 aa		11.15	□□□□□ -0.62
KNL1-208	ENST00000532056	ADAL	Q6DHV7	355 aa		11.15	□□□□□ -0.62
KNL1-208	ENST00000532056	MAEA	Q7L5Y9	396 aa		11.15	□□□□□ -0.62
KNL1-208	ENST00000532056	FAM228A	Q86W67	206 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms